FFCP PHASE1:Hg19::chr4:120549103..120549131,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8654 | |EntrezGene=8654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8784 | |HGNC=8784 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-315bp_to_ENST00000264805_5end | |association_with_transcript=-315bp_to_ENST00000264805_5end | ||
|cluster_id=chr4:120549103..120549131,- | |||
|coexpression_cluster_id=C1271 | |||
|description=CAGE_peak_10_at_PDE5A_5end | |description=CAGE_peak_10_at_PDE5A_5end | ||
|id=chr4:120549103..120549131,- | |id=chr4:120549103..120549131,- | ||
|ontology_enrichment_celltype=CL:0000057!9.40e-14!75;CL:0000055!6.03e-13!180;CL:0002334!3.39e-07!12;CL:0000192!8.39e-07!42;CL:0000514!8.39e-07!42 | |ontology_enrichment_celltype=CL:0000057!9.40e-14!75;CL:0000055!6.03e-13!180;CL:0002334!3.39e-07!12;CL:0000192!8.39e-07!42;CL:0000514!8.39e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0002622;9.61e-09;3!CL:0002504;1.14e-07;3!CL:1000279;1.14e-07;3!CL:1000280;1.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.92e-10,76;CL:0002622,9.44e-09,3;CL:0002504,1.17e-07,3;CL:1000279,1.17e-07,3;CL:1000280,1.17e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.15e-10!115;UBERON:0000475!3.95e-08!365;UBERON:0003102!2.03e-07!95 | |ontology_enrichment_uberon=UBERON:0007023!2.15e-10!115;UBERON:0000475!3.95e-08!365;UBERON:0003102!2.03e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.72e-14;17!UBERON:0000059;8.25e-13;11!UBERON:0005409;2.11e-12;22!UBERON:0001155;4.71e-12;9!UBERON:0003101;2.16e-11;22!UBERON:0000079;2.16e-11;22!UBERON:0003937;1.34e-09;12!UBERON:0005399;1.34e-09;12!UBERON:0004921;1.33e-08;33!UBERON:0002367;5.63e-08;11!UBERON:0010147;5.63e-08;11!UBERON:0006947;7.77e-08;3!UBERON:0004054;7.77e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.63e-14,17;UBERON:0000059,7.10e-13,11;UBERON:0001155,4.01e-12,9;UBERON:0003101,2.55e-11,22;UBERON:0000079,2.55e-11,22;UBERON:0001046,2.63e-11,19;UBERON:0005409,1.29e-10,25;UBERON:0000162,3.35e-10,14;UBERON:0001353,3.35e-10,14;UBERON:0000163,3.35e-10,14;UBERON:0006866,3.35e-10,14;UBERON:0000164,3.35e-10,14;UBERON:0000931,3.35e-10,14;UBERON:0003937,1.53e-09,12;UBERON:0005399,1.53e-09,12;UBERON:0004122,2.06e-09,15;UBERON:0003064,2.48e-08,28;UBERON:0001007,5.39e-08,145;UBERON:0001555,5.39e-08,145;UBERON:0007026,5.39e-08,145;UBERON:0002367,5.77e-08,11;UBERON:0010147,5.77e-08,11;UBERON:0009846,5.77e-08,11;UBERON:0003353,5.77e-08,11;UBERON:0004902,5.77e-08,11;UBERON:0003820,5.77e-08,11;UBERON:0009847,5.77e-08,11;UBERON:0006947,7.38e-08,3;UBERON:0004054,7.38e-08,3;UBERON:0004921,2.80e-07,118;UBERON:0004119,3.51e-07,160;UBERON:0000925,3.51e-07,160;UBERON:0006595,3.51e-07,160 | |||
|phase1_expression=1.09007027562334,0.214100523890983,0.845726424575827,0,1.34088328328186,0.872338524100369,0,0,0,0.245733936501509,0,0,0,1.36142988256051,0.994192127183747,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,1.50401373190767,0.579386075843295,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.01304409331664,1.32409180813219,0.860509862246441,2.4826786753885,1.12135520028461,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0.61246251376468,0.245668634623536,0.413303124703062,1.18800285728205,5.68713937340681,0,0.718618141816238,0,0.250237039743928,0.554128230968366,5.70670907145089,8.27517048657353,2.85452311922534,0.113432183160021,0.717558542755448,0.640672166455702,0.847727604638247,1.50045548042201,0.721367704669072,1.28820270022815,0.930584281657949,0.337552664482532,0.389748020644795,1.7670364197088,1.47279837827679,5.65761198865842,1.77504796258307,0.403008392910561,0.67824236924195,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,1.03993478527958,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0.797814349754612,0,0,0,0,3.14551586047925,0,0,0,3.55391948742546,0,0,0.871533458600294,0,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08575535922538,4.50153468953709,0.542530047399471,1.87173775377726,0.356857977594324,0.157702415033935,0.937131319941706,0.300946099727719,2.27407504055985,0,0,0,1.04260337361699,0,0,0,0,0,0,0,0,1.24053903909388,1.53461973288062,0.841980283299221,1.66580894032411,1.53512174720011,0.804269605718038,2.96836132889982,0.154209693802656,0.177561725313127,0.246381468041427,1.55776328755086,0,0,0,0,6.31479464905337,9.650831904356,12.063446176267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,1.19040304263846,1.89771849817352,0,0,0,0,0,0,0.137836572484531,0,0,0.340906509664404,0.178064071293475,0,0,0,0,0.464845549297286,1.25924938732256,0.6970372701606,0,0,1.73986598415015,0,1.00187420719394,0.372158369359667,0,0,0.255897791311334,2.56763392820352,0.95460974377781,0,2.15846949099978,2.19629623788844,2.94531005864216,0.202182481573316,0,0.421258456238981,0,0.731140468893853,0,4.64099698787152,5.37340641424108,0,0.551365343546124,0.66343897524122,0.438450885253763,0.578775534266688,0,0.202910376962704,0.30982349809975,0.281695602532241,0.143411352204052,0,0.35667105148125,0.709522128141196,0.211107635297664,0.987884678879706,0,0,0,0,0,0.470719003883896,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,7.37217556528958,3.86797481743607,0,0.102268682502155,0,0.311039587661807,0.0898683511473268,0,0,1.87422470710174,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0,0,0,0.41827123283581,1.61595542857974,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,3.98104772431402,1.59223616106011,3.05515072466813,0,0,0,0,1.60515529459758,0.234264445725339,0,0,0,3.94584402849391,3.62972148145992,0,3.60163503882381,0,0,0,0,0,0,0,0,0,0,0,2.79562669187248,0,0,0,0,3.58859361007152,0,0.225980740780532,0,0,0.126621591911757,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,9.17983958726896,0,0,0.136905378891993,0,0.859530882839914,0,0.837847203816763,4.58320848023367,0,0.199679000498991,0,0.223171457441873,0.403100834920358,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.629455057619977,0,0,0,0,0,0,2.17199840701485,0.864221491201268,1.63293680054705,0,0,0,1.47305718976163,0,0,0.129282956361551,0,0,0,1.49502377594773,1.57204305099666,2.89967338743037,0.992332043623902,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0.1251909307065,0.573409195690071,0,0.0620964029413835,0,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0.378806010550178,1.50940741051545,0.889811221596536,0.228840068396924,0.453692771289717,0,0,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0,0.686791410365586,0.673498977531838,2.52369796457302,0,0,0,0.680117776536817,0.463044948647668,0.244736704506468,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,3.062454773532,0.0642292250964595,0,0,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0.206686796501184,0.19024743058172,0.546974809018219,0.548257766857182,11.9090682813431,0,0,0.535701835878287,0,0,0,0.266107110487916,0,0,0.271878931907327,0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| ||
|short_description=p10@PDE5A | |short_description=p10@PDE5A | ||
}} | }} |
Latest revision as of 22:58, 24 September 2015
Short description: | p10@PDE5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PDE5A_5end |
Coexpression cluster: | C1271_Prostate_sacrococcigeal_glioblastoma_penis_Fibroblast_Smooth_aorta |
Association with transcript: | -315bp_to_ENST00000264805_5end |
EntrezGene: | PDE5A |
HGNC: | 8784 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.92e-10 | 76 |
prostate stromal cell | 9.44e-09 | 3 |
enteric smooth muscle cell | 1.17e-07 | 3 |
smooth muscle cell of large intestine | 1.17e-07 | 3 |
smooth muscle cell of colon | 1.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.63e-14 | 17 |
large intestine | 7.10e-13 | 11 |
colon | 4.01e-12 | 9 |
male organism | 2.55e-11 | 22 |
male reproductive system | 2.55e-11 | 22 |
hindgut | 2.63e-11 | 19 |
gastrointestinal system | 1.29e-10 | 25 |
cloaca | 3.35e-10 | 14 |
anal region | 3.35e-10 | 14 |
embryonic cloaca | 3.35e-10 | 14 |
terminal part of digestive tract | 3.35e-10 | 14 |
primitive urogenital sinus | 3.35e-10 | 14 |
proctodeum | 3.35e-10 | 14 |
sex gland | 1.53e-09 | 12 |
male reproductive gland | 1.53e-09 | 12 |
genitourinary system | 2.06e-09 | 15 |
intermediate mesoderm | 2.48e-08 | 28 |
digestive system | 5.39e-08 | 145 |
digestive tract | 5.39e-08 | 145 |
primitive gut | 5.39e-08 | 145 |
prostate gland | 5.77e-08 | 11 |
male accessory sex gland | 5.77e-08 | 11 |
embryonic cloacal epithelium | 5.77e-08 | 11 |
epithelium of hindgut | 5.77e-08 | 11 |
urogenital sinus epithelium | 5.77e-08 | 11 |
prostate bud | 5.77e-08 | 11 |
prostate field | 5.77e-08 | 11 |
male genital duct | 7.38e-08 | 3 |
internal male genitalia | 7.38e-08 | 3 |
subdivision of digestive tract | 2.80e-07 | 118 |
endoderm-derived structure | 3.51e-07 | 160 |
endoderm | 3.51e-07 | 160 |
presumptive endoderm | 3.51e-07 | 160 |