FFCP PHASE1:Hg19::chr6:135513595..135513617,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:135513595..135513617,+
|short_description=p4@MYB
|description=CAGE_peak_4_at_MYB_5end
|association_with_transcript=133bp_to_AJ616796_5end
|EntrezGene=4602...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4602 | |EntrezGene=4602 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7545 | |HGNC=7545 | ||
|TSSclassifier=strong | |||
|UniProt=Q708E1,Q708E2,Q708E3,Q708E5,Q708E6,Q708E8,Q708E9 | |UniProt=Q708E1,Q708E2,Q708E3,Q708E5,Q708E6,Q708E8,Q708E9 | ||
|association_with_transcript=133bp_to_AJ616796_5end | |||
|cluster_id=chr6:135513595..135513617,+ | |||
|coexpression_cluster_id=C1970 | |||
|description=CAGE_peak_4_at_MYB_5end | |||
|id=chr6:135513595..135513617,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.36e-20!182;CL:0000037!2.41e-20!172;CL:0000566!2.41e-20!172;CL:0002032!1.08e-19!165;CL:0000837!1.08e-19!165;CL:0000763!5.49e-14!112;CL:0000049!5.49e-14!112 | |||
|ontology_enrichment_celltype_v019=CL:0000763;1.89e-11;100!CL:0000988;1.23e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.06e-30,177;CL:0002032,1.57e-27,161;CL:0000837,1.57e-27,161;CL:0000037,1.88e-27,168;CL:0000763,1.16e-26,108;CL:0000049,1.16e-26,108;CL:0000817,3.54e-10,3;CL:0000134,3.60e-08,354;CL:0002320,8.14e-08,361;CL:0000785,1.90e-07,2;CL:0000955,1.90e-07,2;CL:0000818,1.90e-07,2;CL:0000954,1.90e-07,2;CL:0000816,1.90e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000049;6.84e-10;108!CL:0000954;1.24e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!3.38e-51!51;DOID:0060083!3.38e-51!51;DOID:1240!7.81e-45!39;DOID:8692!3.44e-38!31;DOID:0050686!2.26e-25!137;DOID:162!4.35e-19!235;DOID:14566!4.07e-18!239;DOID:1036!7.54e-11!8;DOID:0060058!2.40e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.91e-88;31!DOID:1240;1.23e-80;39!DOID:2531;4.65e-54;51!DOID:0060083;4.65e-54;51!DOID:1036;4.41e-25;8!DOID:0050686;1.05e-09;137!DOID:5093;6.45e-08;4!DOID:1612;6.45e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.78e-103,39;DOID:2531,7.91e-91,51;DOID:0060083,7.91e-91,51;DOID:8692,1.84e-90,31;DOID:0050686,4.79e-40,137;DOID:1036,2.83e-25,8;DOID:162,7.67e-20,235;DOID:14566,3.39e-19,239;DOID:5093,6.86e-08,4;DOID:1612,6.86e-08,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.12e-07;2!UBERON:0005058;5.12e-07;2!UBERON:0009113;5.12e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.47e-07,371 | |||
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| ||
|short_description=p4@MYB | |||
}} | }} |
Latest revision as of 23:07, 24 September 2015
Short description: | p4@MYB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MYB_5end |
Coexpression cluster: | C1970_biphenotypic_acute_non_chronic_myelodysplastic_cord_Hodgkin |
Association with transcript: | 133bp_to_AJ616796_5end |
EntrezGene: | MYB |
HGNC: | 7545 |
UniProt: | Q708E1Q708E2Q708E3Q708E5Q708E6Q708E8Q708E9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.06e-30 | 177 |
hematopoietic oligopotent progenitor cell | 1.57e-27 | 161 |
hematopoietic multipotent progenitor cell | 1.57e-27 | 161 |
hematopoietic stem cell | 1.88e-27 | 168 |
myeloid cell | 1.16e-26 | 108 |
common myeloid progenitor | 1.16e-26 | 108 |
precursor B cell | 3.54e-10 | 3 |
mesenchymal cell | 3.60e-08 | 354 |
connective tissue cell | 8.14e-08 | 361 |
mature B cell | 1.90e-07 | 2 |
pre-B-II cell | 1.90e-07 | 2 |
transitional stage B cell | 1.90e-07 | 2 |
small pre-B-II cell | 1.90e-07 | 2 |
immature B cell | 1.90e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.47e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.78e-103 | 39 |
hematologic cancer | 7.91e-91 | 51 |
immune system cancer | 7.91e-91 | 51 |
myeloid leukemia | 1.84e-90 | 31 |
organ system cancer | 4.79e-40 | 137 |
chronic leukemia | 2.83e-25 | 8 |
cancer | 7.67e-20 | 235 |
disease of cellular proliferation | 3.39e-19 | 239 |
thoracic cancer | 6.86e-08 | 4 |
breast cancer | 6.86e-08 | 4 |