FFCP PHASE1:Hg19::chr2:224702712..224702728,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130340 | |EntrezGene=130340 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18971 | |HGNC=18971 | ||
|TSSclassifier=strong | |||
|UniProt=C9JZK4 | |UniProt=C9JZK4 | ||
|association_with_transcript=15bp_to_ENST00000444408_5end | |association_with_transcript=15bp_to_ENST00000444408_5end | ||
|cluster_id=chr2:224702712..224702728,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_4_at_AP1S3_5end | |description=CAGE_peak_4_at_AP1S3_5end | ||
|id=chr2:224702712..224702728,- | |id=chr2:224702712..224702728,- | ||
|ontology_enrichment_celltype=CL:0000066!6.66e-07!254;CL:0000163!6.96e-07!9 | |ontology_enrichment_celltype=CL:0000066!6.66e-07!254;CL:0000163!6.96e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.47e-19;5!CL:0000163;1.45e-16;9!CL:0002032;2.03e-07;1!CL:0000557;2.03e-07;1!CL:0002174;2.75e-07;1!CL:0000501;2.75e-07;1!CL:0000511;6.30e-07;1!CL:0002625;6.30e-07;1!CL:0000817;6.30e-07;1!CL:0000216;6.30e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.31e-19,5;CL:0002028,1.31e-19,5;CL:0000163,1.41e-16,9;CL:0002174,3.01e-07,1;CL:0000501,3.01e-07,1;CL:0000511,5.14e-07,1;CL:0002625,5.14e-07,1;CL:0000216,5.14e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.97e-13;2!UBERON:0005754;2.03e-07;1!UBERON:0006242;6.30e-07;1!UBERON:0005425;6.30e-07;1 | |||
|ontology_enrichment_disease=DOID:162!8.02e-07!235 | |ontology_enrichment_disease=DOID:162!8.02e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:3111;6.30e-07;1!DOID:3603;6.30e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,6.88e-07,1;DOID:3603,6.88e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001008!5.29e-07!45 | |ontology_enrichment_uberon=UBERON:0001008!5.29e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0005904;5.46e-24;4!UBERON:0006947;8.62e-19;3!UBERON:0004054;8.62e-19;3!UBERON:0000058;1.11e-09;10!UBERON:0003135;8.28e-09;11!UBERON:0001000;1.75e-07;1!UBERON:0005352;1.75e-07;1!UBERON:0000998;2.03e-07;1!UBERON:0006868;2.03e-07;1!UBERON:0001301;2.75e-07;1!UBERON:0001136;6.30e-07;1!UBERON:0000941;6.30e-07;1!UBERON:0001343;6.30e-07;1!UBERON:0001785;6.30e-07;1!UBERON:0002464;6.30e-07;1!UBERON:0004904;6.30e-07;1!UBERON:0001021;6.30e-07;1!UBERON:0004910;6.30e-07;1!UBERON:0004813;6.30e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,4.74e-24,4;UBERON:0006947,9.18e-19,3;UBERON:0004054,9.18e-19,3;UBERON:0003135,7.88e-09,11;UBERON:0004876,1.48e-08,11;UBERON:0001000,1.75e-07,1;UBERON:0005352,1.75e-07,1;UBERON:0000058,1.77e-07,19;UBERON:0000998,2.10e-07,1;UBERON:0006868,2.10e-07,1;UBERON:0001301,2.84e-07,1;UBERON:0001136,5.14e-07,1;UBERON:0001343,5.14e-07,1;UBERON:0004910,5.14e-07,1;UBERON:0005154,5.14e-07,1;UBERON:0005295,5.14e-07,1;UBERON:0004813,5.14e-07,1;UBERON:0005297,5.14e-07,1;UBERON:0005294,5.14e-07,1;UBERON:0010141,5.14e-07,1;UBERON:0005891,5.14e-07,1;UBERON:0000941,7.29e-07,1;UBERON:0001785,7.29e-07,1;UBERON:0002464,7.29e-07,1;UBERON:0004904,7.29e-07,1;UBERON:0001021,7.29e-07,1;UBERON:0003902,7.29e-07,1;UBERON:0005425,7.29e-07,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0.247532705920093,0.994192127183747,0,0,0,0,0,0.408001382488506,0,0,0,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0.309632246632152,0,0,0,0.542270404062111,0.142169232487422,0.880801318004542,0,0.200544447470142,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0.853460445133014,0.400395987036012,0,0,0,0,0,1.52909291250092,0,0,1.84368859342554,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.189069634328136,1.10864698731282,0.702678285545008,0.261958150995425,0,0,0.324547393654683,0.348259474598534,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.857839051492628,0.219500570817251,0,0,0.370353780634118,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0.790204397959275,0,0,0.234004265139238,0,0,0.503946384596579,0,0.179117045405697,0.581267877027924,0,0.985326475791887,1.58487181223807,23.8427332871888,21.4738730591273,27.6470929203772,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,2.49932477955143,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0.215714200818617,0,0,0,0.30239029332968,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0,0,0,0,0.604297247958111,0,0.460404944679482,0.114814448164607,0,0,0.451199612907412,0.462092022626489,0.784349769176855,0,0.316654886678627,0,0,0.215915916102139,0,1.08378575017541,0.501689773854853,0,0.831076008928724,0.895499018888713,0.219259876645935,0,0.256450125116389,1.96808787419823,0.325378394664303,0.309123034943167,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0.382838137483752,0.910420027699949,0,0,0,0.616067160352178,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0.196498082026242,0,0,0.211107635297664,0,0.379473173765715,0,0.384888450902048,0,0,0.0941438007767792,0,1.68471475667626,0.443430153536676,0.689170200620878,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0.106824071127473,0,0.490080431962063,0,1.73123055571734,0,0,0,0,0,0.324621940274555,0.280797178113459,0,0,2.50634477090067,0,0,0,4.68430861459359,0.343505344755765,2.76516687877612,2.01308497103174,1.50164227540718,0,0.556812347790485,1.23087398947712,0,0,0,0.37428108081644,0.439524537815682,0.36408156524854,0,0,0.47748896947538,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.539210106883961,0.716084698702437,0,0.493217028184668,0,0,0,0,0,0.520855522170466,0.437299999980979,0,0,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0,0,0.438770794307945,0.10893846351899,0.41827123283581,0.153900517007594,0,0.46112780877612,0.179515288819544,0,0,0.0915975934018623,0,0,0.156980256395025,0.831058409500782,0,0.392125068635479,0,0.189753732724185,0.317873157960757,0.210998064528027,0,0.282706142867882,0.216388639742091,0,0.176915129006678,0,0,0,0.104421949505455,0,0,0,0.364909578431332,0,0,5.12959723704208,0,0.30607276163049,0,0.150323419414493,0.311064574191741,0,0,0,0,0.569219092059585,0,0.347119476670262,0.0979923974143777,0.957651272384428,2.27144668714639,0,0.774050650312681,0.365446585430928,0.410577285266046,0.0969890164884194,0.441280633457501,0,0,0,0.126621591911757,0,0.0801588202515337,1.28071796843612,0,0,0.229073192331831,0.343189995723929,0,0.124252535565433,1.64985824231757,0,0,0,0,0,0,3.83239764200917,2.14882720709979,0,0.279282401272254,0,0,0,0,0,0,0,0,0.472699093843342,0.164831716762333,0.26961417541674,0.196854963029498,0,0,0.136203406111576,0,0,0.415440338029185,0.899895566206002,2.32140586367385,0.0607495566580247,0.335434687599266,0.0788057072991982,0.262272940674991,0,0.35857467866569,0.383830394638891,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0.855434189421647,2.11444506695002,0.213574825135389,0,0.414239055347196,0.496166021811951,0,0.243585196761792,0.638341257770182,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0,0.124192805882767,0.138348634936231,0.37494122388632,1.21319294033318,0,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0.414706207840855,0,0,0.450772826991655,1.1424156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| ||
|short_description=p4@AP1S3 | |short_description=p4@AP1S3 | ||
}} | }} |
Latest revision as of 00:25, 25 September 2015
Short description: | p4@AP1S3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AP1S3_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 15bp_to_ENST00000444408_5end |
EntrezGene: | AP1S3 |
HGNC: | 18971 |
UniProt: | C9JZK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.31e-19 | 5 |
basophil mast progenitor cell | 1.31e-19 | 5 |
endocrine cell | 1.41e-16 | 9 |
follicular cell of ovary | 3.01e-07 | 1 |
granulosa cell | 3.01e-07 | 1 |
androgen binding protein secreting cell | 5.14e-07 | 1 |
seminiferous tubule epithelial cell | 5.14e-07 | 1 |
Sertoli cell | 5.14e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
duct of male reproductive system | 4.74e-24 | 4 |
male genital duct | 9.18e-19 | 3 |
internal male genitalia | 9.18e-19 | 3 |
male reproductive organ | 7.88e-09 | 11 |
urogenital ridge | 1.48e-08 | 11 |
vas deferens | 1.75e-07 | 1 |
spermatic cord | 1.75e-07 | 1 |
duct | 1.77e-07 | 19 |
seminal vesicle | 2.10e-07 | 1 |
seminal fluid secreting gland | 2.10e-07 | 1 |
epididymis | 2.84e-07 | 1 |
mesothelium | 5.14e-07 | 1 |
seminiferous tubule of testis | 5.14e-07 | 1 |
epithelium of male gonad | 5.14e-07 | 1 |
epithelial cord | 5.14e-07 | 1 |
sex cord | 5.14e-07 | 1 |
seminiferous tubule epithelium | 5.14e-07 | 1 |
testis sex cord | 5.14e-07 | 1 |
genital ridge | 5.14e-07 | 1 |
primitive sex cord of indifferent gonad | 5.14e-07 | 1 |
coelomic epithelium | 5.14e-07 | 1 |
cranial nerve II | 7.29e-07 | 1 |
cranial nerve | 7.29e-07 | 1 |
nerve trunk | 7.29e-07 | 1 |
nerve connecting eye with brain | 7.29e-07 | 1 |
nerve | 7.29e-07 | 1 |
retinal neural layer | 7.29e-07 | 1 |
presumptive neural retina | 7.29e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 6.88e-07 | 1 |
mucinous cystadenocarcinoma | 6.88e-07 | 1 |