FFCP PHASE1:Hg19::chr20:30309978..30310004,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:30309978..30310004,- to FFCP PHASE1:Hg19::chr20:30309978..30310004,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=598 | |EntrezGene=598 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=992 | |HGNC=992 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=128bp_to_uc002wwk.2_5end | |||
|cluster_id=chr20:30309978..30310004,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_12_at_BCL2L1_5end | |||
|id=chr20:30309978..30310004,- | |||
|ontology_enrichment_celltype=CL:0000066!2.26e-14!254;CL:0000220!1.57e-07!246;CL:0002321!2.77e-07!248;CL:0000076!5.13e-07!62;CL:0002076!8.80e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.11e-14;10!CL:1000494;2.11e-14;10!CL:1000449;3.19e-11;15!CL:1000497;1.29e-09;17!CL:0002518;1.29e-09;17!CL:0002681;4.62e-07;12!CL:0002584;4.62e-07;12!CL:0002231;5.02e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.24e-14,10;CL:1000494,1.24e-14,10;CL:1000449,2.18e-11,15;CL:1000497,9.25e-10,17;CL:0002518,9.25e-10,17;CL:0000066,3.43e-09,253;CL:0002681,3.64e-07,12;CL:0002584,3.64e-07,12;CL:0002231,5.73e-07,3;CL:0000312,6.01e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:299;4.72e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:299,3.75e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0000483!3.47e-08!309;UBERON:0000119!6.47e-08!312;UBERON:0000178!8.99e-07!15;UBERON:0000179!8.99e-07!15;UBERON:0000463!8.99e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.71e-18;15!UBERON:0000179;6.71e-18;15!UBERON:0000463;6.71e-18;15!UBERON:0004211;2.11e-14;10!UBERON:0009773;2.11e-14;10!UBERON:0001231;2.11e-14;10!UBERON:0004810;2.11e-14;10!UBERON:0006555;3.19e-11;15!UBERON:0004819;3.19e-11;15!UBERON:0001285;3.19e-11;15!UBERON:0007684;3.19e-11;15!UBERON:0006554;2.70e-09;30!UBERON:0001008;2.70e-09;30!UBERON:0002113;1.45e-07;24!UBERON:0011143;1.45e-07;24!UBERON:0002390;2.18e-07;32!UBERON:0001225;4.62e-07;12!UBERON:0008987;4.62e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.22e-18,15;UBERON:0000179,3.22e-18,15;UBERON:0000463,3.22e-18,15;UBERON:0004810,1.24e-14,10;UBERON:0004211,2.18e-11,15;UBERON:0009773,2.18e-11,15;UBERON:0001231,2.18e-11,15;UBERON:0001285,2.18e-11,15;UBERON:0007684,2.18e-11,15;UBERON:0004208,2.18e-11,15;UBERON:0006555,1.60e-10,16;UBERON:0004819,1.60e-10,16;UBERON:0006554,6.11e-09,47;UBERON:0001008,1.18e-08,48;UBERON:0001225,3.64e-07,12;UBERON:0008987,3.64e-07,12;UBERON:0002113,6.75e-07,26;UBERON:0003918,6.75e-07,26;UBERON:0011143,6.75e-07,26;UBERON:0005095,6.75e-07,26;UBERON:0007687,6.75e-07,26 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.140954404095971,0,0,2.61701557230111,0,0,0.261185628199839,0.982935746006035,4.88460817580699,0.436882744260345,0,0,0,0.672325146451775,0,0,0.487932798790507,0,1.83600622119828,0.940364164434263,0.286235987131057,0.958120975510189,0.753255837568817,0.305653622991805,0,0.157421562627358,0,0,0,0,0,0.739508020333575,0.154934401160603,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0.668462741311041,0,0,0.270803863765016,0.25618263945135,0.390178042679635,0.493313713811028,0.829050053357545,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0.236777252044017,0,0.403213486449465,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0.327447688744282,0.364295288292542,0.370784442784429,0,0,0.398873881556595,0,0,0,1.19257444420023,0,0,0.56530794192401,0.419499436209906,0,1.67195973229448,0.258416759169329,1.42306505074684,0.33472061276467,0.402829317109147,0.760272105718513,0.732186172644509,0.735326160691737,0.81014194788176,0.17859945656816,0.22452937262617,0.225222960966644,1.53316637465883,0,0.549605231791222,0,0,0.436094052142534,0,0.379891534993739,0.264818361626438,0.573673241497627,0.354668382198357,0,0,0,0,0.404132016209064,0.653847612453835,0.302714855289863,0,0,0,0,0.149448680551801,0.352303495931295,0.647491777472526,0.280901613404497,0.204154171254893,0.122834317311768,0.413303124703062,1.18800285728205,0.247266929278557,0,2.87447256726495,0,0.375355559615893,0.554128230968366,0,0,0.45071417671979,0,0,0.640672166455702,0,0.300091096084402,0.206105058476878,0,0.18611685633159,0.337552664482532,0.194874010322397,0,0,0.323292113637624,0,0.302256294682921,0,0.386521706326594,0,0.286804595389004,0.121973706129595,0,0,0.414644220061482,0.504641701751257,0,1.56449532329816,0.643240938192885,0,0.928735856063958,0.721879481669586,0.118306800039844,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,1.32438929824395,9.9620635219922,0.171567810298526,1.97550513735526,4.49607013030478,0.402115889646523,0.370353780634118,0.325808305310325,0,1.44331342025273,0.34779121492523,0.234817388471643,0.721832238805369,0.462985512576611,1.14152491340759,1.58040879591855,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0.335964256397719,0.425325291727159,0.895585227028483,0.871901815541886,1.53353071666084,1.47798971368783,0.088048434013226,0.207328115540772,0.144119953416961,0,0,0.381988425558278,0,0,0,0.600686115687835,0,0.112131084345361,0,0.1466765716419,0.258543431515556,0,0,0.26593811658487,0,0.257207374262142,0,1.8649552531127,0,0,0,0.325736184293735,0,0,0.602878754119172,0.871533458600294,0.099972991182057,0,0.502257091432126,0,0.239624855491583,0,0,1.44781306667579,1.64381058040307,1.43248770591916,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0,0,0.542530047399471,0.415941723061614,0.178428988797162,0.157702415033935,0,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0.347534457872331,0,1.02943027143257,0,0,0.106727557803444,0.909382714338778,1.66435439510497,0.30239029332968,0.496215615637554,0,0.561320188866147,0.640695746278505,1.02341449813341,0,0,0.462629081407967,0.177561725313127,0.246381468041427,0,0.232420756919918,8.33930202182193,2.40607764363942,2.11786274552562,0.229628896329213,0.182091168006717,0.131124414959424,8.57279264524082,3.85076685522074,3.13739907670742,7.30696123266303,1.58327443339314,0,0,0.431831832204279,0,0.270946437543853,1.50506932156456,2.80363900349542,1.66215201785745,1.34324852833307,1.97333888981341,2.3529190592241,0.256450125116389,0,0.976135183992909,0.103041011647722,0,0.082509499920588,0.574265537996172,0,0,0.773365746336976,0.616194468458578,0.307007349452259,0.827019434907183,0,0.435050081742686,0.255679882248303,0.267096106940212,1.98341898433174,1.15314040419064,0.255225424989168,0.30347334256665,0,0.31481234683064,0,0.308033580176089,1.06461206063404,0,0.55597265731176,0.572499546967965,0,0.316379424718726,0,1.27948895655667,0,0,1.56989728039846,0,0,0.235624804691373,1.01091240786658,1.58510321173008,0,0,0.731140468893853,0,0.136499911407986,0,0,0,0.66343897524122,2.19225442626881,1.15755106853338,0,0.608731130888112,0.30982349809975,0.281695602532241,0,0,0,0,0,0.329294892959902,0,0.699869440489966,0.962221127255121,0,1.08890984861323,0.188287601553558,1.72202149068492,0,3.10401107475673,1.83778720165568,6.08937131078603,3.82318603571188,15.9501212408766,1.90585420366231,1.64544909234478,3.24236655596359,7.56044012133361,21.4143797599453,0.106824071127473,2.88743956579008,0.490080431962063,0.557409525377156,0,0.142283686696828,0,0.199579371432817,0,0.211673582723883,0,0,0,0.156679895773023,0,0.338583555603207,0,0,0,0,0,0,0,0.19538809540204,1.39203086947621,0,0.270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6984606466 | ||
|short_description=p12@BCL2L1 | |||
}} | }} |
Latest revision as of 01:06, 25 September 2015
Short description: | p12@BCL2L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_BCL2L1_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 128bp_to_uc002wwk.2_5end |
EntrezGene: | BCL2L1 |
HGNC: | 992 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.24e-14 | 10 |
nephron tubule epithelial cell | 1.24e-14 | 10 |
epithelial cell of nephron | 2.18e-11 | 15 |
kidney cell | 9.25e-10 | 17 |
kidney epithelial cell | 9.25e-10 | 17 |
epithelial cell | 3.43e-09 | 253 |
kidney cortical cell | 3.64e-07 | 12 |
renal cortical epithelial cell | 3.64e-07 | 12 |
epithelial cell of prostate | 5.73e-07 | 3 |
keratinocyte | 6.01e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
blood | 3.22e-18 | 15 |
haemolymphatic fluid | 3.22e-18 | 15 |
organism substance | 3.22e-18 | 15 |
nephron tubule epithelium | 1.24e-14 | 10 |
nephron epithelium | 2.18e-11 | 15 |
renal tubule | 2.18e-11 | 15 |
nephron tubule | 2.18e-11 | 15 |
nephron | 2.18e-11 | 15 |
uriniferous tubule | 2.18e-11 | 15 |
nephrogenic mesenchyme | 2.18e-11 | 15 |
excretory tube | 1.60e-10 | 16 |
kidney epithelium | 1.60e-10 | 16 |
urinary system structure | 6.11e-09 | 47 |
renal system | 1.18e-08 | 48 |
cortex of kidney | 3.64e-07 | 12 |
renal parenchyma | 3.64e-07 | 12 |
kidney | 6.75e-07 | 26 |
kidney mesenchyme | 6.75e-07 | 26 |
upper urinary tract | 6.75e-07 | 26 |
kidney rudiment | 6.75e-07 | 26 |
kidney field | 6.75e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 3.75e-09 | 25 |