FFCP PHASE1:Hg19::chr20:30347712..30347751,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:30347712..30347751,+
|short_description=p5@TPX2
|description=CAGE_peak_5_at_TPX2_5end
|association_with_transcript=-124bp_to_AF244547_5end
|EntrezGene=22...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22974 | |EntrezGene=22974 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1249 | |HGNC=1249 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULW0 | |UniProt=Q9ULW0 | ||
|association_with_transcript=-124bp_to_AF244547_5end | |||
|cluster_id=chr20:30347712..30347751,+ | |||
|coexpression_cluster_id=C3623 | |||
|description=CAGE_peak_5_at_TPX2_5end | |||
|id=chr20:30347712..30347751,+ | |||
|ontology_enrichment_celltype=CL:0002494!5.33e-25!16;CL:0000359!3.61e-16!32;CL:0000192!1.46e-15!42;CL:0000514!1.46e-15!42;CL:0002548!4.23e-15!6;CL:0000187!6.92e-15!54;CL:0000680!6.99e-14!57;CL:0000056!6.99e-14!57;CL:0000355!6.99e-14!57;CL:0000183!2.86e-13!59;CL:0000393!5.57e-13!60;CL:0000211!5.57e-13!60;CL:0002590!6.68e-11!3;CL:0000055!4.61e-09!180;CL:1000306!1.29e-08!4;CL:0002547!1.29e-08!4;CL:0000569!2.21e-08!4;CL:0000011!2.21e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0002494;1.93e-19;16!CL:0002548;4.10e-19;6!CL:0002592;7.09e-18;3!CL:0000228;1.33e-13;1!CL:0002557;1.33e-13;1!CL:0002372;1.33e-13;1!CL:0000359;3.96e-09;32!CL:0002589;1.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,2.26e-19,16;CL:0002548,5.26e-19,6;CL:0002592,7.09e-18,3;CL:0002557,8.58e-14,1;CL:0000228,1.42e-13,1;CL:0002372,1.42e-13,1;CL:0000359,8.98e-10,32;CL:0000187,7.45e-08,55;CL:0002589,1.05e-07,2;CL:0000680,1.99e-07,58;CL:0000056,1.99e-07,58;CL:0000355,1.99e-07,58;CL:0000192,3.02e-07,43;CL:0000514,3.02e-07,43;CL:0000393,4.81e-07,61;CL:0000211,4.81e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p5@TPX2 | |||
}} | }} |
Latest revision as of 01:25, 25 September 2015
Short description: | p5@TPX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TPX2_5end |
Coexpression cluster: | C3623_testis_Smooth_Fibroblast_bone_Melanocyte_Myoblast_Multipotent |
Association with transcript: | -124bp_to_AF244547_5end |
EntrezGene: | TPX2 |
HGNC: | 1249 |
UniProt: | Q9ULW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 2.26e-19 | 16 |
cardiac fibroblast | 5.26e-19 | 6 |
smooth muscle cell of the coronary artery | 7.09e-18 | 3 |
fibroblast of pulmonary artery | 8.58e-14 | 1 |
multinucleate cell | 1.42e-13 | 1 |
myotube | 1.42e-13 | 1 |
vascular associated smooth muscle cell | 8.98e-10 | 32 |
muscle cell | 7.45e-08 | 55 |
smooth muscle cell of the brachiocephalic vasculature | 1.05e-07 | 2 |
muscle precursor cell | 1.99e-07 | 58 |
myoblast | 1.99e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.99e-07 | 58 |
smooth muscle cell | 3.02e-07 | 43 |
smooth muscle myoblast | 3.02e-07 | 43 |
electrically responsive cell | 4.81e-07 | 61 |
electrically active cell | 4.81e-07 | 61 |