FFCP PHASE1:Hg19::chr7:107642348..107642390,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3912 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6486 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TAS6 | |||
|association_with_transcript=57bp_to_uc003vev.2_5end | |||
|cluster_id=chr7:107642348..107642390,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_11_at_LAMB1_5end | |||
|id=chr7:107642348..107642390,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.62e-13;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.37e-16!86;UBERON:0007284!1.37e-16!86;UBERON:0000481!1.78e-16!347;UBERON:0002616!2.10e-16!59;UBERON:0002346!2.63e-16!90;UBERON:0000955!1.57e-15!69;UBERON:0006238!1.57e-15!69;UBERON:0000073!5.14e-15!94;UBERON:0001016!5.14e-15!94;UBERON:0000119!6.51e-15!312;UBERON:0001049!7.31e-15!57;UBERON:0005068!7.31e-15!57;UBERON:0006241!7.31e-15!57;UBERON:0007135!7.31e-15!57;UBERON:0001950!9.77e-15!20;UBERON:0005743!1.06e-14!86;UBERON:0000483!1.57e-14!309;UBERON:0001017!2.52e-14!82;UBERON:0002619!4.33e-14!22;UBERON:0000153!1.07e-13!129;UBERON:0007811!1.07e-13!129;UBERON:0000956!1.79e-13!25;UBERON:0000203!1.79e-13!25;UBERON:0000033!1.80e-13!123;UBERON:0000475!1.94e-13!365;UBERON:0000477!6.51e-12!286;UBERON:0000924!1.80e-11!173;UBERON:0006601!1.80e-11!173;UBERON:0004121!1.88e-11!169;UBERON:0002020!3.49e-11!34;UBERON:0003528!3.49e-11!34;UBERON:0007023!3.86e-11!115;UBERON:0001869!4.12e-11!32;UBERON:0002780!4.35e-11!41;UBERON:0001890!4.35e-11!41;UBERON:0006240!4.35e-11!41;UBERON:0004111!8.84e-11!241;UBERON:0000468!9.32e-11!659;UBERON:0003080!1.53e-10!42;UBERON:0003056!1.59e-10!61;UBERON:0001893!7.23e-10!34;UBERON:0002791!1.41e-09!33;UBERON:0000025!2.33e-08!194;UBERON:0000467!2.45e-08!625;UBERON:0000480!3.25e-08!626;UBERON:0000922!4.18e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.86e-29;20!UBERON:0002619;1.82e-26;22!UBERON:0000956;4.51e-23;25!UBERON:0000203;4.51e-23;25!UBERON:0001869;2.61e-16;32!UBERON:0002791;8.99e-16;32!UBERON:0003528;2.56e-14;34!UBERON:0002020;2.56e-14;34!UBERON:0001893;2.72e-14;34!UBERON:0000073;7.80e-13;53!UBERON:0002616;7.80e-13;53!UBERON:0002021;1.09e-12;5!UBERON:0002780;1.63e-12;41!UBERON:0001890;1.63e-12;41!UBERON:0000200;2.44e-11;6!UBERON:0000955;5.03e-11;68!UBERON:0001871;1.01e-09;6!UBERON:0002771;1.53e-09;2!UBERON:0001905;2.72e-09;2!UBERON:0002757;2.72e-09;2!UBERON:0010134;2.72e-09;2!UBERON:0005408;2.72e-09;2!UBERON:0001899;2.72e-09;2!UBERON:0002702;3.78e-09;2!UBERON:0001017;8.79e-08;75!UBERON:0001016;1.21e-07;83!UBERON:0001872;1.46e-07;5!UBERON:0002037;7.53e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.78e-29,20;UBERON:0002619,2.34e-26,22;UBERON:0000956,5.63e-23,25;UBERON:0000203,5.63e-23,25;UBERON:0000073,1.67e-22,53;UBERON:0002616,1.67e-22,53;UBERON:0001049,4.52e-21,56;UBERON:0005068,4.52e-21,56;UBERON:0006241,4.52e-21,56;UBERON:0007135,4.52e-21,56;UBERON:0000955,2.84e-20,68;UBERON:0006238,2.84e-20,68;UBERON:0003075,5.29e-18,82;UBERON:0007284,5.29e-18,82;UBERON:0002780,5.68e-18,41;UBERON:0001890,5.68e-18,41;UBERON:0003080,5.68e-18,41;UBERON:0006240,5.68e-18,41;UBERON:0002791,1.75e-17,32;UBERON:0001869,1.75e-17,32;UBERON:0002346,6.27e-17,86;UBERON:0003056,2.31e-16,61;UBERON:0003528,2.56e-16,34;UBERON:0002020,2.56e-16,34;UBERON:0001893,2.56e-16,34;UBERON:0001017,2.72e-16,81;UBERON:0001016,3.34e-14,89;UBERON:0010371,4.03e-13,104;UBERON:0002021,2.05e-12,5;UBERON:0010314,1.52e-11,132;UBERON:0000200,1.79e-11,6;UBERON:0001871,1.02e-09,6;UBERON:0011216,1.10e-09,223;UBERON:0001905,1.67e-09,2;UBERON:0002757,1.67e-09,2;UBERON:0010134,1.67e-09,2;UBERON:0005408,1.67e-09,2;UBERON:0001899,1.67e-09,2;UBERON:0002771,1.82e-09,2;UBERON:0002702,1.97e-09,2;UBERON:0004121,2.43e-08,171;UBERON:0000924,2.43e-08,171;UBERON:0006601,2.43e-08,171;UBERON:0001872,1.71e-07,5;UBERON:0007023,3.12e-07,114;UBERON:0000025,4.06e-07,192;UBERON:0002037,5.84e-07,6;UBERON:0006215,5.84e-07,6 | |||
|phase1_expression=0.54503513781167,0,0.563817616383885,0,1.34088328328186,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0.408001382488506,0,0,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0,0,0,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,1.33037638477538,0.43917392846563,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0.860234595106124,0.694281003215189,0,0.419499436209906,0,0,0.258416759169329,0.71153252537342,0.66944122552934,0,0,0.24406205754817,0,0,0.535798369704479,0.22452937262617,0.563057402416611,1.53316637465883,0,0.366403487860815,0,0,0.436094052142534,0,0.25326102332916,0.132409180813219,1.14734648299525,0,0.560677600142307,0,0,0.311211035399766,0.404132016209064,0.653847612453835,0.454072282934794,1.72852777344,0,0.624320153660641,0.570471821544449,0,0.587172493218824,0.161872944368132,0.842704840213491,0,0.245668634623536,0.103325781175765,0,0.494533858557114,0.910161361938026,0,0,0.375355559615893,0.277064115484183,0,0.30648779579902,0,0.113432183160021,1.07633781413317,0,0,1.80054657650641,0.618315175430633,0.515281080091258,0,0.337552664482532,0,0.252433774244115,0.276149695926898,0.323292113637624,1.06502877754984,0.201504196455281,0,0.193260853163297,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,2.80483547606892,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.185176890317059,0,1.03993478527958,0,0.34779121492523,1.17408694235822,0.288732895522148,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.560655421726804,0,0.36669142910475,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.428933980974443,1.62786481617433,0,0,0,0,0,0,0.399891964728228,0,0,0,0,1.14861935834114,1.42636905040718,0,0.205476322550383,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0,0,0.173767228936166,0.391602314925481,0.686286847621712,0,0,0,0,0,0.30239029332968,0.496215615637554,0.153461973288062,0,0,0.511707249066704,0,0,0.771048469013278,0.177561725313127,0.246381468041427,0,0.232420756919918,0.241718899183244,0,0.0920809889358963,0.574072240823034,0.364182336013434,0.131124414959424,0,0,0,0,0.527758144464379,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0,0,0,0,0,0.290012154876366,0.924291702687866,0.15350367472613,0.137836572484531,0.966782203814463,0.435050081742686,0.340906509664404,0.445160178233687,0,0.384380134730212,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0.190630193923825,0,1.28381696410176,0.318203247925937,0.78494864019923,0,0.274537029736055,0.117812402345686,0.404364963146632,0,0,0,0,0,0.409499734223957,0.848432591722276,0,0,0.66343897524122,0.438450885253763,0,0.655894752046633,0,0,0.281695602532241,0.143411352204052,0,0.35667105148125,0,0,0,0,0.349934720244983,0,0,1.08890984861323,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0.614321404198464,0,1.40669416410513,0.333926115068718,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,1.02044907978036,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0.173624994933292,0,0.120596438625408,3.05163472634166,1.76926815889959,4.13766666534966,0.658156191461918,0,0,0.307801034015188,0,0.922255617552241,0.179515288819544,1.62971057883012,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,3.66618086960175,0,0,0,0,0.802577647298789,0.234264445725339,0,0.19566461893209,0,0.789168805698781,2.41981432097328,0.61214552326098,0.189559738885464,0,0.103688191397247,0,0,0,0,0.853828638089378,0,0,0,0.0870592065804026,0.698906672968121,0,0,0,0.0821154570532092,0.0969890164884194,16.3273834379275,0.225980740780532,0.822251547880505,0,0.823040347426423,0.391102765469606,0,0,0.39961921916426,0,0.343609788497747,0,0,0.124252535565433,0.471388069233591,0.67952103036807,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0.558564802544508,0.687481272035051,0.717873024576814,0.599037001496973,0.429226048136571,0,0.403100834920358,0,0,0.0787831823072236,0,0.202210631562555,0,0,0,0.544813624446302,0,0,0,0,0.77380195455795,0.971992906528395,0,0.551639951094387,0.524545881349981,0.316801009558219,0,0.767660789277781,0.714695326373367,0,0.5085370753095,0,0,0,0,0,0.511164065356265,0.339936274560377,0,0,0.646414781807753,0.66116300871345,0.171086837884329,0,0.106787412567695,1.10043013569766,1.65695622138878,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,1.77213635993397,2.07444650333337,2.3786276834235,2.86704597845036,0.110929051536852,0.248385611765534,0,0.499921631848426,0.151649117541648,0,0.705797459094515,0,0.144921028610825,0,0,0.554805861502613,0.189403005275089,0.251567901752575,0,0,0.302461847526478,0,0.295710299979268,0,0.899606224327209,0,0,0,1.04349012362347,0.300515217994437,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0,0,0.343395705182793,0,0,0.385239660814607,0.428883182749851,0,0.680117776536817,0.694567422971502,0.244736704506468,0,0.308801447160972,0.877136198314828,0,0,0.168942440653073,0.256241518587947,0,0.303859956177382,2.35039341457942,0.194860308839388,0,0,0,0,0,0,0,0,1.70254786070051,0.184105950251841,0,0,0.511577485214607,0.323474434190045,0.314531883711793,0.764467467344097,0.33946505990805,0,0.371807292777007,0,0,0,0,0.352675943690684,1.8374728641192,0.578063025868136,1.41696576325585,0.957803154342908,1.23069818544453,1.00828678488687,1.31398779682014,1.13032951942296,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0.261906694481422,0.163771917510097,0.295712172434091,0.337687923091973,1.56215619722769,1.2401207790071,0.951237152908602,1.09394961803644,0.548257766857182,0,0,0,4.28561468702629,1.68141861109412,0.606965604236632,0.455324382702595,0.0887023701626388,0,0.342976018874837,0.203909198930495,0.920818829879887,0,0.444925607568277,0.39246546425257,0,0.280272163313789,0,0,0,0.285906176706625,0.316027223465453,0,0.347716544605159,0,0.828864656652147,1.3657478167516,0,0,0.118332000730565,0.0852134047591577,0.423387050190929,0,0,0,0.223710863595585,0.098150233615243,0.121917924982269,0,0.102662806856247,3.4794432940146,0,0,0,0,0,0.109940516745429,0.150962843566674,0.231522474323834,0.874238242015829,0,0,0,0.588925401344836,0,0.4226557275834,0,0.281951753939561,0.322289439867886,0,0,0.352894871715692,0,1.46067277649303,0.458729283404541,0,0.157771562193185,0.475940431336403,2.18175345170189,0.5290268405154,0,0,0.432626562123789,0,0.109265571963696,0,0,0,0.18378979906969,0,0.0757786982182394,0,0,0,0.213233981900981,0.714193294391221,0.193766729508018,0.124149428591716,0.560659312903067,0.0636471582781649,0.808468755832877,0,0,0,0,0.332660356546013,0.651226148887796,0.213454691755431,0,0.269475606319761,2.34640942403454,0.488965776731466,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p11@LAMB1 | |||
}} |
Latest revision as of 02:15, 25 September 2015
Short description: | p11@LAMB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_LAMB1_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 57bp_to_uc003vev.2_5end |
EntrezGene: | LAMB1 |
HGNC: | 6486 |
UniProt: | Q8TAS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data