FFCP PHASE2:Hg19::chr22:44577237..44577262,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:64098 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:14654 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=64098 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=14654 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9HBI0 | ||
|association_with_transcript=0bp_to_ENST00000415224,NM_001137606,uc003beq.2,uc011aqf.1_5end | |association_with_transcript=0bp_to_ENST00000415224,NM_001137606,uc003beq.2,uc011aqf.1_5end | ||
|cluster_id=chr22:44577237..44577262,+ | |cluster_id=chr22:44577237..44577262,+ | ||
Latest revision as of 02:30, 25 September 2015
| Short description: | p3@PARVG |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_PARVG_5end |
| Coexpression cluster: | C805_granulocyte_acute_CD14_Eosinophils_Dendritic_Peripheral_Basophils |
| Association with transcript: | 0bp_to_ENST00000415224, NM_001137606, uc003beq.2, uc011aqf.1_5end |
| EntrezGene: | PARVG |
| HGNC: | 14654 |
| UniProt: | Q9HBI0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@PARVG |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic stem cell | 1.67e-84 | 168 |
| hematopoietic cell | 3.92e-78 | 177 |
| hematopoietic oligopotent progenitor cell | 5.39e-78 | 161 |
| hematopoietic multipotent progenitor cell | 5.39e-78 | 161 |
| leukocyte | 4.83e-71 | 136 |
| nongranular leukocyte | 3.25e-64 | 115 |
| hematopoietic lineage restricted progenitor cell | 1.17e-62 | 120 |
| myeloid cell | 2.17e-56 | 108 |
| common myeloid progenitor | 2.17e-56 | 108 |
| myeloid leukocyte | 4.70e-48 | 72 |
Showing 1 to 10 of 41 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 2.55e-54 | 98 |
| blood island | 2.55e-54 | 98 |
| hemolymphoid system | 1.07e-49 | 108 |
| bone marrow | 2.97e-40 | 76 |
| immune system | 8.41e-40 | 93 |
| bone element | 8.68e-36 | 82 |
| skeletal element | 8.69e-31 | 90 |
| skeletal system | 1.04e-25 | 100 |
| connective tissue | 3.64e-17 | 371 |
| lateral plate mesoderm | 3.58e-15 | 203 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| myeloid leukemia | 2.82e-13 | 31 |
| leukemia | 5.20e-12 | 39 |
| hematologic cancer | 1.73e-07 | 51 |
| immune system cancer | 1.73e-07 | 51 |
Showing 1 to 4 of 4 entries
