FFCP PHASE1:Hg19::chr22:44894060..44894138,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84247 | |EntrezGene=84247 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13343 | |HGNC=13343 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ICC9 | |UniProt=Q6ICC9 | ||
|association_with_transcript=39bp_to_ENST00000341255_5end | |association_with_transcript=39bp_to_ENST00000341255_5end | ||
|cluster_id=chr22:44894060..44894138,- | |||
|description=CAGE_peak_2_at_LDOC1L_5end | |description=CAGE_peak_2_at_LDOC1L_5end | ||
|id=chr22:44894060..44894138,- | |id=chr22:44894060..44894138,- | ||
|ontology_enrichment_celltype=CL:0000133!1.87e-09!59;CL:0000333!2.47e-08!41;CL:0002319!7.83e-08!25;CL:0000066!1.08e-07!254 | |ontology_enrichment_celltype=CL:0000133!1.87e-09!59;CL:0000333!2.47e-08!41;CL:0002319!7.83e-08!25;CL:0000066!1.08e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002319;8.21e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,2.01e-09,59;CL:0000333,2.67e-08,41;CL:0000066,5.60e-08,253;CL:0002319,8.62e-08,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.88e-12!143;DOID:305!6.29e-11!106 | |ontology_enrichment_disease=DOID:0050687!1.88e-12!143;DOID:305!6.29e-11!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.67e-12,143;DOID:305,5.54e-11,106 | |||
|ontology_enrichment_uberon=UBERON:0002113!4.63e-07!27;UBERON:0003918!4.63e-07!27;UBERON:0005095!4.63e-07!27;UBERON:0007687!4.63e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.13e-07;24!UBERON:0011143;2.13e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,7.03e-08,26;UBERON:0003918,7.03e-08,26;UBERON:0011143,7.03e-08,26;UBERON:0005095,7.03e-08,26;UBERON:0007687,7.03e-08,26;UBERON:0000489,4.30e-07,31 | |||
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| ||
|short_description=p2@LDOC1L | |short_description=p2@LDOC1L | ||
}} | }} |
Latest revision as of 02:51, 25 September 2015
Short description: | p2@LDOC1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LDOC1L_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_ENST00000341255_5end |
EntrezGene: | LDOC1L |
HGNC: | 13343 |
UniProt: | Q6ICC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 2.01e-09 | 59 |
migratory neural crest cell | 2.67e-08 | 41 |
epithelial cell | 5.60e-08 | 253 |
neural cell | 8.62e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
kidney | 7.03e-08 | 26 |
kidney mesenchyme | 7.03e-08 | 26 |
upper urinary tract | 7.03e-08 | 26 |
kidney rudiment | 7.03e-08 | 26 |
kidney field | 7.03e-08 | 26 |
cavitated compound organ | 4.30e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.67e-12 | 143 |
carcinoma | 5.54e-11 | 106 |