FFCP PHASE1:Hg19::chr3:141205852..141205929,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5922 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9872 | |||
|TSSclassifier=strong | |||
|UniProt=Q15283,E7EU60,G3V0F9,D6RBA9,A8K7K1 | |||
|association_with_transcript=0bp_to_ENST00000286364,ENST00000423660,ENST00000452898,ENST00000515549,NM_006506,uc003etz.1,uc003eua.1,uc010huq.1_5end | |||
|cluster_id=chr3:141205852..141205929,+ | |||
|coexpression_cluster_id=C777 | |||
|description=CAGE_peak_1_at_RASA2_5end | |||
|id=chr3:141205852..141205929,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.11e-25!140;CL:0000037!1.97e-21!172;CL:0000566!1.97e-21!172;CL:0000988!9.25e-19!182;CL:0002032!1.05e-18!165;CL:0000837!1.05e-18!165;CL:0002031!2.09e-17!124;CL:0002087!4.44e-17!119;CL:0000542!1.41e-13!53;CL:0000051!1.41e-13!53;CL:0000838!1.81e-13!52;CL:0000791!3.44e-12!18;CL:0000789!3.44e-12!18;CL:0002420!3.44e-12!18;CL:0002419!3.44e-12!18;CL:0000790!3.44e-12!18;CL:0000084!4.40e-11!25;CL:0000827!4.40e-11!25;CL:0000766!3.26e-09!76;CL:0000625!4.41e-08!11;CL:0000763!2.24e-07!112;CL:0000049!2.24e-07!112;CL:0000557!3.77e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.43e-12;18!CL:0000789;3.43e-12;18!CL:0002419;3.43e-12;18!CL:0000084;4.45e-11;25!CL:0000542;8.89e-09;53!CL:0000625;4.39e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.52e-28,136;CL:0000037,4.46e-23,168;CL:0000988,1.42e-20,177;CL:0002032,2.99e-20,161;CL:0000837,2.99e-20,161;CL:0002031,3.59e-19,120;CL:0002087,7.19e-19,115;CL:0000542,1.41e-13,53;CL:0000051,1.41e-13,53;CL:0000838,1.81e-13,52;CL:0000791,3.44e-12,18;CL:0000789,3.44e-12,18;CL:0002420,3.44e-12,18;CL:0002419,3.44e-12,18;CL:0000790,3.44e-12,18;CL:0000084,4.40e-11,25;CL:0000827,4.40e-11,25;CL:0000766,8.82e-11,72;CL:0000557,1.62e-08,67;CL:0000763,2.00e-08,108;CL:0000049,2.00e-08,108;CL:0000625,4.41e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;3.43e-12;18!CL:0000051;8.89e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.45e-12!102;UBERON:0003061!1.45e-12!102;UBERON:0002193!3.65e-11!112;UBERON:0007023!9.58e-10!115;UBERON:0000178!1.58e-08!15;UBERON:0000179!1.58e-08!15;UBERON:0000463!1.58e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.55e-08;15!UBERON:0000179;1.55e-08;15!UBERON:0000463;1.55e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.60e-14,98;UBERON:0003061,3.60e-14,98;UBERON:0002193,1.47e-12,108;UBERON:0007023,1.59e-09,114;UBERON:0000178,1.58e-08,15;UBERON:0000179,1.58e-08,15;UBERON:0000463,1.58e-08,15;UBERON:0002405,1.46e-07,93;UBERON:0002371,4.63e-07,76;UBERON:0001474,8.08e-07,82 | |||
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| |||
|short_description=p1@RASA2 | |||
}} |
Latest revision as of 03:42, 25 September 2015
Short description: | p1@RASA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RASA2_5end |
Coexpression cluster: | C777_Neutrophils_Eosinophils_CD19_CD4_CD8_Whole_Natural |
Association with transcript: | 0bp_to_ENST00000286364, ENST00000423660, ENST00000452898, ENST00000515549, NM_006506, uc003etz.1, uc003eua.1, uc010huq.1_5end |
EntrezGene: | RASA2 |
HGNC: | 9872 |
UniProt: | Q15283E7EU60G3V0F9D6RBA9A8K7K1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.52e-28 | 136 |
hematopoietic stem cell | 4.46e-23 | 168 |
hematopoietic cell | 1.42e-20 | 177 |
hematopoietic oligopotent progenitor cell | 2.99e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.99e-20 | 161 |
hematopoietic lineage restricted progenitor cell | 3.59e-19 | 120 |
nongranular leukocyte | 7.19e-19 | 115 |
lymphocyte | 1.41e-13 | 53 |
common lymphoid progenitor | 1.41e-13 | 53 |
lymphoid lineage restricted progenitor cell | 1.81e-13 | 52 |
mature alpha-beta T cell | 3.44e-12 | 18 |
alpha-beta T cell | 3.44e-12 | 18 |
immature T cell | 3.44e-12 | 18 |
mature T cell | 3.44e-12 | 18 |
immature alpha-beta T cell | 3.44e-12 | 18 |
T cell | 4.40e-11 | 25 |
pro-T cell | 4.40e-11 | 25 |
myeloid leukocyte | 8.82e-11 | 72 |
granulocyte monocyte progenitor cell | 1.62e-08 | 67 |
myeloid cell | 2.00e-08 | 108 |
common myeloid progenitor | 2.00e-08 | 108 |
CD8-positive, alpha-beta T cell | 4.41e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.60e-14 | 98 |
blood island | 3.60e-14 | 98 |
hemolymphoid system | 1.47e-12 | 108 |
adult organism | 1.59e-09 | 114 |
blood | 1.58e-08 | 15 |
haemolymphatic fluid | 1.58e-08 | 15 |
organism substance | 1.58e-08 | 15 |
immune system | 1.46e-07 | 93 |
bone marrow | 4.63e-07 | 76 |
bone element | 8.08e-07 | 82 |