FFCP PHASE1:Hg19::chr20:31823792..31823808,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51297 | |EntrezGene=51297 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15749 | |HGNC=15749 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NP55 | |UniProt=Q9NP55 | ||
|association_with_transcript=0bp_to_ENST00000354297,ENST00000375413,ENST00000375422,NM_001243193,NM_016583,NM_130852,uc002wyt.3,uc002wyu.3,uc002wyv.2_5end | |association_with_transcript=0bp_to_ENST00000354297,ENST00000375413,ENST00000375422,NM_001243193,NM_016583,NM_130852,uc002wyt.3,uc002wyu.3,uc002wyv.2_5end | ||
|cluster_id=chr20:31823792..31823808,+ | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_1_at_BPIFA1_5end | |description=CAGE_peak_1_at_BPIFA1_5end | ||
|id=chr20:31823792..31823808,+ | |id=chr20:31823792..31823808,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.61e-13;1!UBERON:0006965;1.12e-07;2!UBERON:0008814;1.45e-07;2!UBERON:0010056;1.45e-07;2!UBERON:0008947;3.41e-07;29 | |||
|ontology_enrichment_disease=DOID:178!8.12e-08!1;DOID:326!8.12e-08!1;DOID:3978!8.12e-08!1;DOID:3394!8.12e-08!1;DOID:5844!8.12e-08!1 | |ontology_enrichment_disease=DOID:178!8.12e-08!1;DOID:326!8.12e-08!1;DOID:3978!8.12e-08!1;DOID:3394!8.12e-08!1;DOID:5844!8.12e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!5.92e-19!53;UBERON:0001042!9.75e-17!10;UBERON:0009145!9.75e-17!10;UBERON:0003127!3.22e-15!2;UBERON:0006562!3.35e-15!11;UBERON:0000007!1.20e-14!2;UBERON:0000341!2.06e-14!2;UBERON:0001004!2.69e-13!72;UBERON:0001557!3.49e-12!19;UBERON:0008814!6.24e-11!15;UBERON:0000974!1.21e-10!10;UBERON:0001723!2.31e-10!3;UBERON:0001033!2.31e-10!3;UBERON:0010056!2.31e-10!3;UBERON:0002372!2.19e-08!1;UBERON:0001961!2.19e-08!1;UBERON:0001744!2.19e-08!1;UBERON:0001735!2.19e-08!1;UBERON:0000072!2.68e-08!46;UBERON:0002171!3.11e-08!1;UBERON:0006518!3.11e-08!1;UBERON:0008949!3.11e-08!1;UBERON:0000101!3.11e-08!1;UBERON:0002167!3.11e-08!1;UBERON:0007029!3.58e-08!1;UBERON:0003296!9.32e-08!4;UBERON:0010133!9.32e-08!4;UBERON:0002370!2.86e-07!4;UBERON:0005058!2.86e-07!4;UBERON:0009113!2.86e-07!4;UBERON:0003295!2.86e-07!4;UBERON:0005562!2.86e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.67e-26;2!UBERON:0001723;7.09e-18;3!UBERON:0001033;7.09e-18;3!UBERON:0002372;5.15e-14;1!UBERON:0001961;5.15e-14;1!UBERON:0001744;5.15e-14;1!UBERON:0001042;5.15e-14;1!UBERON:0001735;5.15e-14;1!UBERON:0002171;9.14e-14;1!UBERON:0006518;9.14e-14;1!UBERON:0008949;9.14e-14;1!UBERON:0000101;9.14e-14;1!UBERON:0002167;9.14e-14;1!UBERON:0007029;1.25e-13;1!UBERON:0003126;2.99e-08;7!UBERON:0001005;2.99e-08;7!UBERON:0006562;1.20e-07;2!UBERON:0000007;1.28e-07;2!UBERON:0000341;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.67e-26,2;UBERON:0001723,7.09e-18,3;UBERON:0001033,7.09e-18,3;UBERON:0010056,7.09e-18,3;UBERON:0000065,4.65e-14,54;UBERON:0002372,5.15e-14,1;UBERON:0001961,5.15e-14,1;UBERON:0001744,5.15e-14,1;UBERON:0001735,5.15e-14,1;UBERON:0002171,9.73e-14,1;UBERON:0006518,9.73e-14,1;UBERON:0008949,9.73e-14,1;UBERON:0000101,9.73e-14,1;UBERON:0002167,9.73e-14,1;UBERON:0007029,1.25e-13,1;UBERON:0001042,5.20e-12,10;UBERON:0009145,5.20e-12,10;UBERON:0006562,5.70e-11,11;UBERON:0001004,4.87e-10,74;UBERON:0003126,2.99e-08,7;UBERON:0001005,2.99e-08,7;UBERON:0000007,1.28e-07,2;UBERON:0000341,1.75e-07,2 | |||
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|short_description=p1@BPIFA1 | |short_description=p1@BPIFA1 | ||
}} | }} |
Latest revision as of 04:51, 25 September 2015
Short description: | p1@BPIFA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BPIFA1_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 0bp_to_ENST00000354297, ENST00000375413, ENST00000375422, NM_001243193, NM_016583, NM_130852, uc002wyt.3, uc002wyu.3, uc002wyv.2_5end |
EntrezGene: | BPIFA1 |
HGNC: | 15749 |
UniProt: | Q9NP55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.67e-26 | 2 |
tongue | 7.09e-18 | 3 |
gustatory system | 7.09e-18 | 3 |
future tongue | 7.09e-18 | 3 |
respiratory tract | 4.65e-14 | 54 |
tonsil | 5.15e-14 | 1 |
mucosa-associated lymphoid tissue | 5.15e-14 | 1 |
lymphoid tissue | 5.15e-14 | 1 |
tonsillar ring | 5.15e-14 | 1 |
lower lobe of right lung | 9.73e-14 | 1 |
right lung lobe | 9.73e-14 | 1 |
lower lobe of lung | 9.73e-14 | 1 |
lobe of lung | 9.73e-14 | 1 |
right lung | 9.73e-14 | 1 |
surface | 1.25e-13 | 1 |
chordate pharynx | 5.20e-12 | 10 |
pharyngeal region of foregut | 5.20e-12 | 10 |
pharynx | 5.70e-11 | 11 |
respiratory system | 4.87e-10 | 74 |
trachea | 2.99e-08 | 7 |
respiratory airway | 2.99e-08 | 7 |
pituitary gland | 1.28e-07 | 2 |
throat | 1.75e-07 | 2 |