FFCP PHASE1:Hg19::chr6:138752074..138752086,-: Difference between revisions
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|id=chr6:138752074..138752086,-
|short_description=p48@NHSL1
|description=CAGE_peak_48_at_NHSL1_5end
|association_with_transcript=-46bp_to_AK299585_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57224 | |EntrezGene=57224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=21021 | |HGNC=21021 | ||
|TSSclassifier=strong | |||
|UniProt=B4DS58 | |UniProt=B4DS58 | ||
|association_with_transcript=-46bp_to_AK299585_5end | |||
|cluster_id=chr6:138752074..138752086,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_48_at_NHSL1_5end | |||
|id=chr6:138752074..138752086,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.17e-17;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!5.19e-13!32;UBERON:0002780!1.22e-12!41;UBERON:0001890!1.22e-12!41;UBERON:0006240!1.22e-12!41;UBERON:0002791!1.35e-12!33;UBERON:0003080!2.59e-12!42;UBERON:0002020!3.33e-12!34;UBERON:0003528!3.33e-12!34;UBERON:0001893!3.33e-12!34;UBERON:0001017!3.61e-12!82;UBERON:0001950!3.79e-12!20;UBERON:0005743!1.66e-11!86;UBERON:0002619!4.79e-11!22;UBERON:0000955!2.06e-10!69;UBERON:0006238!2.06e-10!69;UBERON:0005383!2.27e-10!3;UBERON:0005382!2.27e-10!3;UBERON:0000073!3.26e-10!94;UBERON:0001016!3.26e-10!94;UBERON:0000956!1.04e-09!25;UBERON:0000203!1.04e-09!25;UBERON:0002702!8.78e-09!1;UBERON:0001049!9.11e-09!57;UBERON:0005068!9.11e-09!57;UBERON:0006241!9.11e-09!57;UBERON:0007135!9.11e-09!57;UBERON:0001871!1.09e-08!7;UBERON:0002135!1.27e-08!1;UBERON:0001301!1.71e-08!1;UBERON:0001874!1.84e-08!1;UBERON:0002616!1.99e-08!59;UBERON:0003056!4.12e-08!61;UBERON:0000369!5.43e-08!4;UBERON:0002435!5.43e-08!4;UBERON:0000204!5.43e-08!4;UBERON:0010082!5.43e-08!4;UBERON:0002420!1.29e-07!9;UBERON:0007245!1.29e-07!9;UBERON:0010009!1.29e-07!9;UBERON:0010011!1.29e-07!9;UBERON:0000454!1.29e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.45e-16;49!UBERON:0001950;5.40e-15;20!UBERON:0002619;9.23e-14;22!UBERON:0002114;2.59e-12;2!UBERON:0000956;2.90e-12;25!UBERON:0000203;2.90e-12;25!UBERON:0002791;2.42e-09;32!UBERON:0001869;3.96e-09;32!UBERON:0003528;8.29e-09;34!UBERON:0002020;8.29e-09;34!UBERON:0001016;1.15e-08;83!UBERON:0002021;5.35e-08;5!UBERON:0001872;5.92e-08;5!UBERON:0002108;6.55e-08;4!UBERON:0001893;1.60e-07;34!UBERON:0002780;2.03e-07;41!UBERON:0001890;2.03e-07;41!UBERON:0000955;2.28e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,5.40e-15,20;UBERON:0002619,9.23e-14,22;UBERON:0002114,2.59e-12,2;UBERON:0000956,2.90e-12,25;UBERON:0000203,2.90e-12,25;UBERON:0001017,2.09e-10,81;UBERON:0002791,8.02e-10,32;UBERON:0001869,8.02e-10,32;UBERON:0001016,1.98e-09,89;UBERON:0003528,2.65e-09,34;UBERON:0002020,2.65e-09,34;UBERON:0001893,2.65e-09,34;UBERON:0000955,3.92e-08,68;UBERON:0006238,3.92e-08,68;UBERON:0002021,5.35e-08,5;UBERON:0001872,6.13e-08,5;UBERON:0002108,6.55e-08,4;UBERON:0002780,7.23e-08,41;UBERON:0001890,7.23e-08,41;UBERON:0003080,7.23e-08,41;UBERON:0006240,7.23e-08,41 | |||
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|short_description=p48@NHSL1 | |||
}} | }} |
Latest revision as of 04:58, 25 September 2015
Short description: | p48@NHSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_48_at_NHSL1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -46bp_to_AK299585_5end |
EntrezGene: | NHSL1 |
HGNC: | 21021 |
UniProt: | B4DS58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 5.40e-15 | 20 |
regional part of cerebral cortex | 9.23e-14 | 22 |
duodenum | 2.59e-12 | 2 |
cerebral cortex | 2.90e-12 | 25 |
pallium | 2.90e-12 | 25 |
central nervous system | 2.09e-10 | 81 |
regional part of telencephalon | 8.02e-10 | 32 |
cerebral hemisphere | 8.02e-10 | 32 |
nervous system | 1.98e-09 | 89 |
brain grey matter | 2.65e-09 | 34 |
gray matter | 2.65e-09 | 34 |
telencephalon | 2.65e-09 | 34 |
brain | 3.92e-08 | 68 |
future brain | 3.92e-08 | 68 |
occipital lobe | 5.35e-08 | 5 |
parietal lobe | 6.13e-08 | 5 |
small intestine | 6.55e-08 | 4 |
regional part of forebrain | 7.23e-08 | 41 |
forebrain | 7.23e-08 | 41 |
anterior neural tube | 7.23e-08 | 41 |
future forebrain | 7.23e-08 | 41 |