FFCP PHASE1:Hg19::chr20:32077880..32077951,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9139 | |EntrezGene=9139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1536 | |HGNC=1536 | ||
|TSSclassifier=strong | |||
|UniProt=F8W6D7,O43439,B4DFM9,Q5TGE8 | |UniProt=F8W6D7,O43439,B4DFM9,Q5TGE8 | ||
|association_with_transcript=0bp_to_ENST00000342704,ENST00000375279,ENST00000397803,ENST00000417366,ENST00000471007,NM_001032999,uc002wze.1,uc010zug.1_5end | |association_with_transcript=0bp_to_ENST00000342704,ENST00000375279,ENST00000397803,ENST00000417366,ENST00000471007,NM_001032999,uc002wze.1,uc010zug.1_5end | ||
|cluster_id=chr20:32077880..32077951,+ | |||
|description=CAGE_peak_1_at_CBFA2T2_5end | |description=CAGE_peak_1_at_CBFA2T2_5end | ||
|id=chr20:32077880..32077951,+ | |id=chr20:32077880..32077951,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.46e-11;82 | |||
|ontology_enrichment_disease=DOID:0050687!9.65e-08!143 | |ontology_enrichment_disease=DOID:0050687!9.65e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,9.65e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.27e-30!115;UBERON:0000073!2.07e-23!94;UBERON:0001016!2.07e-23!94;UBERON:0001017!2.82e-23!82;UBERON:0001049!8.21e-23!57;UBERON:0005068!8.21e-23!57;UBERON:0006241!8.21e-23!57;UBERON:0007135!8.21e-23!57;UBERON:0005743!5.72e-22!86;UBERON:0000955!1.67e-20!69;UBERON:0006238!1.67e-20!69;UBERON:0003080!3.82e-19!42;UBERON:0002780!5.21e-19!41;UBERON:0001890!5.21e-19!41;UBERON:0006240!5.21e-19!41;UBERON:0002616!4.29e-18!59;UBERON:0001893!9.65e-16!34;UBERON:0002020!1.45e-15!34;UBERON:0003528!1.45e-15!34;UBERON:0002791!3.26e-15!33;UBERON:0002346!9.72e-15!90;UBERON:0001869!1.55e-14!32;UBERON:0003075!1.10e-13!86;UBERON:0007284!1.10e-13!86;UBERON:0002619!5.77e-13!22;UBERON:0000924!2.42e-12!173;UBERON:0006601!2.42e-12!173;UBERON:0001950!5.55e-12!20;UBERON:0004121!1.86e-11!169;UBERON:0000153!2.90e-11!129;UBERON:0007811!2.90e-11!129;UBERON:0003056!7.67e-11!61;UBERON:0000956!1.01e-10!25;UBERON:0000203!1.01e-10!25;UBERON:0000033!7.89e-10!123 | |ontology_enrichment_uberon=UBERON:0007023!3.27e-30!115;UBERON:0000073!2.07e-23!94;UBERON:0001016!2.07e-23!94;UBERON:0001017!2.82e-23!82;UBERON:0001049!8.21e-23!57;UBERON:0005068!8.21e-23!57;UBERON:0006241!8.21e-23!57;UBERON:0007135!8.21e-23!57;UBERON:0005743!5.72e-22!86;UBERON:0000955!1.67e-20!69;UBERON:0006238!1.67e-20!69;UBERON:0003080!3.82e-19!42;UBERON:0002780!5.21e-19!41;UBERON:0001890!5.21e-19!41;UBERON:0006240!5.21e-19!41;UBERON:0002616!4.29e-18!59;UBERON:0001893!9.65e-16!34;UBERON:0002020!1.45e-15!34;UBERON:0003528!1.45e-15!34;UBERON:0002791!3.26e-15!33;UBERON:0002346!9.72e-15!90;UBERON:0001869!1.55e-14!32;UBERON:0003075!1.10e-13!86;UBERON:0007284!1.10e-13!86;UBERON:0002619!5.77e-13!22;UBERON:0000924!2.42e-12!173;UBERON:0006601!2.42e-12!173;UBERON:0001950!5.55e-12!20;UBERON:0004121!1.86e-11!169;UBERON:0000153!2.90e-11!129;UBERON:0007811!2.90e-11!129;UBERON:0003056!7.67e-11!61;UBERON:0000956!1.01e-10!25;UBERON:0000203!1.01e-10!25;UBERON:0000033!7.89e-10!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.39e-14;41!UBERON:0001890;5.39e-14;41!UBERON:0001893;2.43e-13;34!UBERON:0003528;3.41e-13;34!UBERON:0002020;3.41e-13;34!UBERON:0002791;4.22e-13;32!UBERON:0001869;5.00e-13;32!UBERON:0002619;6.25e-13;22!UBERON:0000073;1.42e-12;53!UBERON:0002616;1.42e-12;53!UBERON:0001950;6.00e-12;20!UBERON:0000956;1.12e-10;25!UBERON:0000203;1.12e-10;25!UBERON:0001016;9.74e-10;83!UBERON:0000955;1.15e-09;68!UBERON:0001017;1.44e-09;75!UBERON:0007023;6.25e-09;114!UBERON:0000922;2.36e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.17e-29,114;UBERON:0001016,1.80e-24,89;UBERON:0001017,4.40e-23,81;UBERON:0001049,1.18e-22,56;UBERON:0005068,1.18e-22,56;UBERON:0006241,1.18e-22,56;UBERON:0007135,1.18e-22,56;UBERON:0000073,2.03e-21,53;UBERON:0002616,2.03e-21,53;UBERON:0000955,2.56e-20,68;UBERON:0006238,2.56e-20,68;UBERON:0002780,5.21e-19,41;UBERON:0001890,5.21e-19,41;UBERON:0003080,5.21e-19,41;UBERON:0006240,5.21e-19,41;UBERON:0001893,9.65e-16,34;UBERON:0003528,1.45e-15,34;UBERON:0002020,1.45e-15,34;UBERON:0002791,1.34e-14,32;UBERON:0001869,1.55e-14,32;UBERON:0002346,1.69e-14,86;UBERON:0011216,8.42e-14,223;UBERON:0003075,1.92e-13,82;UBERON:0007284,1.92e-13,82;UBERON:0002619,5.77e-13,22;UBERON:0001950,5.55e-12,20;UBERON:0004121,1.01e-11,171;UBERON:0000924,1.01e-11,171;UBERON:0006601,1.01e-11,171;UBERON:0003056,4.52e-11,61;UBERON:0000956,1.01e-10,25;UBERON:0000203,1.01e-10,25;UBERON:0010371,8.06e-09,104 | |||
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1533556 | ||
|short_description=p1@CBFA2T2 | |short_description=p1@CBFA2T2 | ||
}} | }} |
Latest revision as of 05:28, 25 September 2015
Short description: | p1@CBFA2T2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CBFA2T2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000342704, ENST00000375279, ENST00000397803, ENST00000417366, ENST00000471007, NM_001032999, uc002wze.1, uc010zug.1_5end |
EntrezGene: | CBFA2T2 |
HGNC: | 1536 |
UniProt: | F8W6D7O43439B4DFM9Q5TGE8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.17e-29 | 114 |
nervous system | 1.80e-24 | 89 |
central nervous system | 4.40e-23 | 81 |
neural tube | 1.18e-22 | 56 |
neural rod | 1.18e-22 | 56 |
future spinal cord | 1.18e-22 | 56 |
neural keel | 1.18e-22 | 56 |
regional part of nervous system | 2.03e-21 | 53 |
regional part of brain | 2.03e-21 | 53 |
brain | 2.56e-20 | 68 |
future brain | 2.56e-20 | 68 |
regional part of forebrain | 5.21e-19 | 41 |
forebrain | 5.21e-19 | 41 |
anterior neural tube | 5.21e-19 | 41 |
future forebrain | 5.21e-19 | 41 |
telencephalon | 9.65e-16 | 34 |
brain grey matter | 1.45e-15 | 34 |
gray matter | 1.45e-15 | 34 |
regional part of telencephalon | 1.34e-14 | 32 |
cerebral hemisphere | 1.55e-14 | 32 |
neurectoderm | 1.69e-14 | 86 |
organ system subdivision | 8.42e-14 | 223 |
neural plate | 1.92e-13 | 82 |
presumptive neural plate | 1.92e-13 | 82 |
regional part of cerebral cortex | 5.77e-13 | 22 |
neocortex | 5.55e-12 | 20 |
ectoderm-derived structure | 1.01e-11 | 171 |
ectoderm | 1.01e-11 | 171 |
presumptive ectoderm | 1.01e-11 | 171 |
pre-chordal neural plate | 4.52e-11 | 61 |
cerebral cortex | 1.01e-10 | 25 |
pallium | 1.01e-10 | 25 |
ecto-epithelium | 8.06e-09 | 104 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 9.65e-08 | 143 |