FFCP PHASE1:Hg19::chr8:11561684..11561751,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:11561684..11561751,+ to FFCP PHASE1:Hg19::chr8:11561684..11561751,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2626 | |EntrezGene=2626 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4173 | |HGNC=4173 | ||
|TSSclassifier=strong | |||
|UniProt=P43694,E9PRI5,Q8WYX6 | |UniProt=P43694,E9PRI5,Q8WYX6 | ||
|association_with_transcript=0bp_to_ENST00000335135,ENST00000528027,NM_002052,uc003wuc.2,uc010lrz.1_5end | |||
|cluster_id=chr8:11561684..11561751,+ | |||
|description=CAGE_peak_1_at_GATA4_5end | |||
|id=chr8:11561684..11561751,+ | |||
|ontology_enrichment_celltype=CL:0002494!1.69e-15!16;CL:0000077!1.63e-10!19;CL:0000181!2.36e-10!12;CL:0000417!2.36e-10!12;CL:0000668!2.36e-10!12;CL:0000414!2.36e-10!12;CL:0000412!2.36e-10!12;CL:0000182!2.36e-10!12;CL:0002539!1.89e-07!10;CL:0002321!4.14e-07!248;CL:0002548!4.78e-07!6;CL:0000220!9.00e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002494;2.75e-19;16!CL:0000182;9.94e-13;12!CL:0000077;9.08e-11;19!CL:0002548;1.47e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,2.69e-19,16;CL:0000182,9.52e-13,12;CL:0000077,9.76e-11,19;CL:0002548,1.51e-08,6;CL:0002321,9.47e-08,250 | |||
|ontology_enrichment_development_v019=UBERON:0009497;5.90e-13;13!UBERON:0004161;4.92e-12;11 | |||
|ontology_enrichment_disease=DOID:14566!1.09e-08!239;DOID:162!3.31e-08!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.76e-09,239;DOID:162,1.68e-08,235 | |||
|ontology_enrichment_uberon=UBERON:0003914!3.86e-27!118;UBERON:0007100!2.07e-25!27;UBERON:0000948!2.30e-22!24;UBERON:0005498!2.30e-22!24;UBERON:0004140!2.30e-22!24;UBERON:0009881!2.30e-22!24;UBERON:0004141!2.30e-22!24;UBERON:0003084!2.30e-22!24;UBERON:0007005!2.30e-22!24;UBERON:0004139!2.30e-22!24;UBERON:0004291!2.30e-22!24;UBERON:0001048!1.72e-20!168;UBERON:0004872!3.09e-18!84;UBERON:0009497!4.49e-18!25;UBERON:0000015!4.49e-18!25;UBERON:0002423!4.49e-18!25;UBERON:0006235!4.49e-18!25;UBERON:0004161!4.49e-18!25;UBERON:0008835!7.61e-18!22;UBERON:0003894!7.61e-18!22;UBERON:0007499!2.55e-17!25;UBERON:0009854!1.12e-16!23;UBERON:0002107!1.63e-16!19;UBERON:0006925!1.63e-16!19;UBERON:0008836!1.63e-16!19;UBERON:0009856!2.77e-16!26;UBERON:0000466!8.50e-15!126;UBERON:0001009!1.13e-13!113;UBERON:0004535!6.17e-12!110;UBERON:0005057!8.43e-12!26;UBERON:0000025!8.44e-12!194;UBERON:0000991!4.11e-11!21;UBERON:0009196!4.11e-11!21;UBERON:0009117!4.11e-11!21;UBERON:0005564!4.11e-11!21;UBERON:0000949!4.55e-11!45;UBERON:0002323!5.49e-11!46;UBERON:0004458!1.64e-10!49;UBERON:0004176!2.60e-10!22;UBERON:0003103!8.18e-10!69;UBERON:0000947!9.00e-10!21;UBERON:0010191!9.00e-10!21;UBERON:0001041!4.17e-09!98;UBERON:0001981!1.18e-08!60;UBERON:0007500!1.18e-08!60;UBERON:0004537!1.18e-08!60;UBERON:0006965!1.18e-08!60;UBERON:0005177!3.45e-08!107;UBERON:0002368!3.46e-08!35;UBERON:0002365!4.20e-08!31;UBERON:0002330!4.20e-08!31;UBERON:0000992!5.32e-08!13;UBERON:0001637!1.31e-07!42;UBERON:0003509!1.31e-07!42;UBERON:0004572!1.31e-07!42;UBERON:0000490!1.50e-07!138;UBERON:0005172!1.84e-07!55;UBERON:0005173!1.84e-07!55;UBERON:0004237!1.89e-07!10;UBERON:0004695!1.89e-07!10;UBERON:0002111!1.89e-07!10;UBERON:0004178!1.89e-07!10;UBERON:0003886!2.07e-07!63;UBERON:0004573!9.10e-07!33;UBERON:0004571!9.10e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.29e-30;25!UBERON:0000948;9.81e-27;22!UBERON:0002423;1.11e-22;25!UBERON:0002107;1.40e-20;19!UBERON:0006925;1.40e-20;19!UBERON:0000949;1.05e-11;43!UBERON:0002368;3.87e-11;33!UBERON:0002365;9.81e-10;31!UBERON:0002330;9.81e-10;31!UBERON:0000991;2.50e-09;21!UBERON:0000992;2.26e-07;13!UBERON:0000947;3.41e-07;21!UBERON:0010191;3.41e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.19e-32,27;UBERON:0000948,4.76e-28,24;UBERON:0005498,4.76e-28,24;UBERON:0004140,4.76e-28,24;UBERON:0009881,4.76e-28,24;UBERON:0004141,4.76e-28,24;UBERON:0003084,4.76e-28,24;UBERON:0007005,4.76e-28,24;UBERON:0004139,4.76e-28,24;UBERON:0004291,4.76e-28,24;UBERON:0003914,2.28e-27,117;UBERON:0009497,9.28e-23,25;UBERON:0000015,9.28e-23,25;UBERON:0002423,9.28e-23,25;UBERON:0006235,9.28e-23,25;UBERON:0004161,9.28e-23,25;UBERON:0008835,2.75e-22,22;UBERON:0003894,2.75e-22,22;UBERON:0009854,5.63e-21,23;UBERON:0002107,1.37e-20,19;UBERON:0006925,1.37e-20,19;UBERON:0008836,1.37e-20,19;UBERON:0007499,2.15e-20,25;UBERON:0009856,2.68e-19,26;UBERON:0004872,1.27e-17,83;UBERON:0001048,2.92e-17,160;UBERON:0001009,1.27e-14,112;UBERON:0000949,1.83e-14,45;UBERON:0004535,1.46e-12,109;UBERON:0000025,2.66e-11,192;UBERON:0002368,1.46e-10,35;UBERON:0002365,3.95e-10,31;UBERON:0002330,3.95e-10,31;UBERON:0002323,2.28e-09,46;UBERON:0000991,2.71e-09,21;UBERON:0009196,2.71e-09,21;UBERON:0009117,2.71e-09,21;UBERON:0005564,2.71e-09,21;UBERON:0004458,3.85e-09,49;UBERON:0003103,4.06e-09,68;UBERON:0004176,1.12e-08,22;UBERON:0005256,1.31e-08,122;UBERON:0003929,6.33e-08,54;UBERON:0005177,9.14e-08,101;UBERON:0000490,1.02e-07,148;UBERON:0005172,1.31e-07,54;UBERON:0005173,1.31e-07,54;UBERON:0000992,2.36e-07,13;UBERON:0000947,3.61e-07,21;UBERON:0010191,3.61e-07,21;UBERON:0001637,4.21e-07,42;UBERON:0003509,4.21e-07,42;UBERON:0004572,4.21e-07,42;UBERON:0007500,5.75e-07,59;UBERON:0001981,5.75e-07,59;UBERON:0004537,5.75e-07,59;UBERON:0006965,5.75e-07,59;UBERON:0003886,5.91e-07,54;UBERON:0002294,7.10e-07,9;UBERON:0001173,7.10e-07,9;UBERON:0004912,7.10e-07,9 | |||
|phase1_expression=0,0,0,0,0,5.23403114460221,0,0,0.261185628199839,0.245733936501509,0,0,0.263766978228454,0,0,12.101852636132,13.2592796165275,14.6062018077475,14.1500511649247,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.2659225679093,69.0821885494745,51.0171621755686,0,0,0,0,0,0.189069634328136,0,0,11.5916481815476,0,0,0,0,0,0,0,0,5.16782259153433,6.881876760849,4.85996702250632,14.1326985481002,16.7799774483962,0,6.89683389571475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,3.16576279161449,4.8991396900891,0.286836620748814,0.354668382198357,40.3687872102461,20.2823091886439,33.7934541331509,70.0224829649474,34.3512213777705,36.2885424911878,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7670734592429,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.795178609928912,5.22872742912833,1.0366105501537,5.2987378683882,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0.269662616320329,0.196221465125346,0,16.9775754563669,23.8411015465858,58.4435096090588,60.2735716680722,7.60530208930985,26.5363348502959,19.4960669204863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.4576964716136,0,0,0,36.9607626692248,0,2.1100756394171,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0,0.117141414992713,0,0,4.1389228517002,0,0.184369168541703,0,1.56640925970192,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,11.8734453155993,0,0,0,16.6161417338759,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,9.47977307159045,0,0,0,0,53.0256968485727,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0.464845549297286,3.46293581513704,0.6970372701606,24.0266192537349,10.6461206063404,4.34966496037536,0,0,0,2.84741482246853,14.4878947382107,4.35026245229268,1.71175595213568,0,0,0,0,0,9.30039415237254,15.8510321173008,20.6416643557101,0.975267478179181,0,0,0,0,1.13008116620243,0,0,0,0.578775534266688,0,0,0,10.1410416911607,0.286822704408103,0,0,0,0,0,0,0,0,0,0,9.50852387845469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18552280775341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6967999804165,0,0,0,3.69376990848337,0,0,0,0,0,0,0,0,0.19924798825107,0,17.8872250976536,4.09074730008619,0,0,2.24670877868317,1.9692329214317,0,0.295930216910801,0,0,0,0,0,0,0.437299999980979,0,0,0,1.18193840883968,2.06846023944879,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,9.0014224119131,0,0.0897576444097721,4.78048436456836,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.6181697223916,0,140.254493865934,80.4401242541734,76.5412889874988,0.067401132980677,3.21031058919516,0,3.64909578431332,1.76098157038881,7.76897214509097,0,37.5071219750858,0,0.063186579628488,9.01940516486955,13.5831530730394,2.65861549082874,3.64091151463049,3.13932918407225,5.97362148864794,1.70765727617876,0,0,0,0,0.52418000472609,2.57979048707425,0,0,0,0.193978032976839,0,0,0.137041924646751,0,0,4.88878456837007,0,30.7372312424668,4.19600180122473,7.92497294347583,0,100.554668747111,0,2.23654564017779,0.235694034616795,9.10558180693214,8.57743339761132,2.24396078799908,0,0,0,0,39.968186052056,27.8660595536073,47.198725815011,47.4362077704185,34.4579051796871,54.5123671362246,108.594190178552,83.6892965407022,123.281672013143,23.0591925467138,3.49487848582361,27.4165474429138,25.3840843813993,26.4221891908405,16.6342443759925,0,0,0,3.69732241469544,0,0.415440338029185,0,0,0,2.68347750079413,0,0.0524545881349981,0,0,0,78.6164859010704,61.5745532439851,0,8.6879936280594,0,0,0,0,0,14.8438839891365,39.2759986257261,10.6005511129777,0,0,1.88195521672762,0,0,0.157204305099666,0,1.48849806543585,0,4.50632614009315,1.91502377331055,0,0,0,0,0.314108192500469,0,0,0,0,0,0.0620964029413835,0,4.99921631848426,13.4967714612067,11.1331480082537,7.76377205003967,0,0,0,0,0,0,0,0,16.7053249929754,30.8511084477008,32.7972493229667,18.6297488986939,17.5226443880073,7.19684979461767,13.3526142913583,0.829412415681711,0,0.521745061811734,1.80309130796662,1.14241563650639,10.9855097965259,14.3660440770022,3.86678005352958,25.5218567933172,6.36953421917786,0,0,0,0,17.3357847366573,8.14878047224718,12.0057374303997,4.53411851024545,3.70435958918134,9.0552580667393,5.55175407352611,4.63202170741458,8.77136198314828,9.01114644323993,10.0315299900876,2.02730928783687,2.81865670446741,0.345430341731199,4.86175929883811,0,0,0.265729680626726,0.817826971279221,0,0.983091635014877,4.01493034381391,1.9998739585493,0.533458648470704,0,0,0,0,0,0,8.84163453452791,0,0.982886743728125,7.63796384793114,0,1.36329340684902,7.26238393365217,0,0,0,0,0,0.385375350578757,0,0,0,0,0,0,0,0,0,0,0,0,2.7614397042404,0,101.082681301402,0.20170506870352,87.5295692581064,0,0,6.94923605220113,0,0,0,0.0634158101939068,0,0,0,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| ||
|short_description=p1@GATA4 | |||
}} | }} |
Latest revision as of 06:00, 25 September 2015
Short description: | p1@GATA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GATA4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000335135, ENST00000528027, NM_002052, uc003wuc.2, uc010lrz.1_5end |
EntrezGene: | GATA4 |
HGNC: | 4173 |
UniProt: | P43694E9PRI5Q8WYX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 2.69e-19 | 16 |
hepatocyte | 9.52e-13 | 12 |
mesothelial cell | 9.76e-11 | 19 |
cardiac fibroblast | 1.51e-08 | 6 |
embryonic cell | 9.47e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.76e-09 | 239 |
cancer | 1.68e-08 | 235 |