FFCP PHASE1:Hg19::chr12:89413463..89413484,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=728084 | |EntrezGene=728084 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_038385,uc001tax.1_5end | |association_with_transcript=0bp_to_NR_038385,uc001tax.1_5end | ||
|cluster_id=chr12:89413463..89413484,- | |||
|description=CAGE_peak_1_at_LOC728084_5end | |description=CAGE_peak_1_at_LOC728084_5end | ||
|id=chr12:89413463..89413484,- | |id=chr12:89413463..89413484,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002127;4.08e-10;1!CL:0000911;4.08e-10;1!CL:0000814;4.08e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,4.09e-10,1;CL:0000914,4.09e-10,1;CL:0000911,4.09e-10,1;CL:0000814,4.09e-10,1;CL:0002042,4.09e-10,1;CL:0002039,4.09e-10,1;CL:0002040,4.09e-10,1;CL:0002041,4.09e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.53e-09;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;1.68e-09;1!DOID:4549;1.68e-09;1!DOID:5861;1.68e-09;1!DOID:6496;1.68e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.15e-09,1;DOID:4549,1.15e-09,1;DOID:5861,1.15e-09,1;DOID:6496,1.15e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001893!5.28e-29!34;UBERON:0001869!7.95e-29!32;UBERON:0001049!1.19e-28!57;UBERON:0005068!1.19e-28!57;UBERON:0006241!1.19e-28!57;UBERON:0007135!1.19e-28!57;UBERON:0002020!2.27e-28!34;UBERON:0003528!2.27e-28!34;UBERON:0002619!7.98e-28!22;UBERON:0002791!2.45e-27!33;UBERON:0002616!4.35e-27!59;UBERON:0001017!6.03e-25!82;UBERON:0002780!9.08e-25!41;UBERON:0001890!9.08e-25!41;UBERON:0006240!9.08e-25!41;UBERON:0001950!1.35e-24!20;UBERON:0005743!1.67e-24!86;UBERON:0003080!5.39e-24!42;UBERON:0000956!6.95e-24!25;UBERON:0000203!6.95e-24!25;UBERON:0000955!6.08e-23!69;UBERON:0006238!6.08e-23!69;UBERON:0000073!4.61e-21!94;UBERON:0001016!4.61e-21!94;UBERON:0002346!2.41e-20!90;UBERON:0003075!2.66e-19!86;UBERON:0007284!2.66e-19!86;UBERON:0007023!1.16e-18!115;UBERON:0003056!2.78e-15!61;UBERON:0000200!1.80e-12!6;UBERON:0000033!7.11e-11!123;UBERON:0000153!8.73e-11!129;UBERON:0007811!8.73e-11!129;UBERON:0000349!3.26e-10!5;UBERON:0000025!1.29e-09!194;UBERON:0000924!1.69e-09!173;UBERON:0006601!1.69e-09!173;UBERON:0001871!5.95e-09!7;UBERON:0004121!9.14e-09!169;UBERON:0004111!3.59e-08!241;UBERON:0000477!1.48e-07!286;UBERON:0002298!4.43e-07!8;UBERON:0002771!5.11e-07!3;UBERON:0001872!5.63e-07!5;UBERON:0002420!6.55e-07!9;UBERON:0007245!6.55e-07!9;UBERON:0010009!6.55e-07!9;UBERON:0010011!6.55e-07!9;UBERON:0000454!6.55e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.70e-50;22!UBERON:0001950;2.57e-46;20!UBERON:0000956;2.84e-44;25!UBERON:0000203;2.84e-44;25!UBERON:0001869;1.22e-43;32!UBERON:0001893;1.06e-41;34!UBERON:0002791;6.47e-37;32!UBERON:0003528;3.27e-36;34!UBERON:0002020;3.27e-36;34!UBERON:0000200;9.22e-35;6!UBERON:0001870;9.94e-26;3!UBERON:0002780;2.49e-24;41!UBERON:0001890;2.49e-24;41!UBERON:0002702;1.23e-17;2!UBERON:0000349;7.40e-16;5!UBERON:0001872;1.35e-15;5!UBERON:0000073;7.86e-15;53!UBERON:0002616;7.86e-15;53!UBERON:0001017;2.05e-12;75!UBERON:0001871;1.48e-11;6!UBERON:0000955;1.53e-11;68!UBERON:0001016;1.32e-10;83!UBERON:0002022;7.18e-10;1!UBERON:0007190;7.18e-10;1!UBERON:0002581;1.68e-09;1!UBERON:0001882;1.68e-09;1!UBERON:0003112;1.68e-09;1!UBERON:0011158;1.68e-09;1!UBERON:0003128;1.68e-09;1!UBERON:0005403;1.68e-09;1!UBERON:0001703;1.68e-09;1!UBERON:0002241;1.68e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.54e-50,22;UBERON:0001869,3.60e-47,32;UBERON:0001950,2.47e-46,20;UBERON:0001893,2.42e-44,34;UBERON:0000956,2.69e-44,25;UBERON:0000203,2.69e-44,25;UBERON:0002791,1.62e-40,32;UBERON:0003528,4.44e-38,34;UBERON:0002020,4.44e-38,34;UBERON:0002780,1.45e-36,41;UBERON:0001890,1.45e-36,41;UBERON:0003080,1.45e-36,41;UBERON:0006240,1.45e-36,41;UBERON:0000200,9.92e-35,6;UBERON:0000073,6.52e-28,53;UBERON:0002616,6.52e-28,53;UBERON:0001049,2.56e-26,56;UBERON:0005068,2.56e-26,56;UBERON:0006241,2.56e-26,56;UBERON:0007135,2.56e-26,56;UBERON:0001017,3.96e-26,81;UBERON:0001870,5.28e-26,3;UBERON:0000955,2.65e-24,68;UBERON:0006238,2.65e-24,68;UBERON:0003056,5.31e-24,61;UBERON:0001016,2.75e-23,89;UBERON:0002702,8.80e-18,2;UBERON:0003075,2.58e-17,82;UBERON:0007284,2.58e-17,82;UBERON:0002346,2.09e-16,86;UBERON:0007023,5.87e-16,114;UBERON:0000349,6.70e-16,5;UBERON:0001872,1.65e-15,5;UBERON:0010371,3.58e-13,104;UBERON:0001871,1.36e-11,6;UBERON:0010314,1.72e-11,132;UBERON:0011216,2.11e-11,223;UBERON:0004121,6.59e-11,171;UBERON:0000924,6.59e-11,171;UBERON:0006601,6.59e-11,171;UBERON:0007190,7.50e-10,1;UBERON:0002022,9.70e-10,1;UBERON:0001882,1.48e-09,1;UBERON:0005403,1.48e-09,1;UBERON:0003112,1.76e-09,1;UBERON:0011158,1.76e-09,1;UBERON:0003128,1.76e-09,1;UBERON:0001703,1.76e-09,1;UBERON:0002241,1.76e-09,1;UBERON:0004761,1.76e-09,1;UBERON:0009617,1.76e-09,1;UBERON:0002581,2.46e-09,1;UBERON:0000025,4.12e-07,192 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0.650296737799391,0.657751618414705,1.10540007114339,0.579606171470105,0,0,0,0.453237370790265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0.225222960966644,0,0.949265659568129,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82842748766342,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,1.1490322207942,0,0,0.280797178113459,0,0,0,2.53937666702405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0,0,0,0,6.95903353436409,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87581104301739,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,1.75508317723178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,1.76512253383001,0,0.137041924646751,0,2.9756074099263,0,0.160317640503067,0,0,0.144090417154106,0.572682980829578,0,0.432164393964449,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,2.38568906942791,0.272406812223151,0,0,0,0,0,2.00473536971481,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0.574647645245373,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0.7520696820681,0,0,0,1.77213635993397,3.29470915235301,2.253436752717,0.573409195690071,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0,0,0.449803112163605,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0,1.54150140231503,1.41696576325585,0.638535436228605,0.41023272848151,0,0.899044282034833,1.45328081068666,0,0,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0,0,0,2.36381546164381,4.68646859168308,0.620060389503552,1.45856363445986,0,0,0,0,0,0,0,0,0,0,0,0,0.747667062745149,1.11813715056843,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0.23248285073625,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14056163399623,0,0,0,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,1.69978725477287,0,0.5290268405154,0,0,0,0,0,0.380095503034311,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0.332660356546013,0.0814032686109745,0,0,0.179650404213174,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0.650296737799391,0.657751618414705,1.10540007114339,0.579606171470105,0,0,0,0.453237370790265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0.225222960966644,0,0.949265659568129,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82842748766342,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,1.1490322207942,0,0,0.280797178113459,0,0,0,2.53937666702405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0,0,0,0,6.95903353436409,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87581104301739,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,1.75508317723178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,1.76512253383001,0,0.137041924646751,0,2.9756074099263,0,0.160317640503067,0,0,0.144090417154106,0.572682980829578,0,0.432164393964449,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,2.38568906942791,0.272406812223151,0,0,0,0,0,2.00473536971481,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0.574647645245373,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0.7520696820681,0,0,0,1.77213635993397,3.29470915235301,2.253436752717,0.573409195690071,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0,0,0.449803112163605,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0,1.54150140231503,1.41696576325585,0.638535436228605,0.41023272848151,0,0.899044282034833,1.45328081068666,0,0,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0,0,0,2.36381546164381,4.68646859168308,0.620060389503552,1.45856363445986,0,0,0,0,0,0,0,0,0,0,0,0,0.747667062745149,1.11813715056843,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0.23248285073625,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14056163399623,0,0,0,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,1.69978725477287,0,0.5290268405154,0,0,0,0,0,0.380095503034311,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0.332660356546013,0.0814032686109745,0,0,0.179650404213174,0,0.122241444182866,0,0,0,0 | ||
|short_description=p1@LOC728084 | |short_description=p1@LOC728084 | ||
}} | }} |
Latest revision as of 06:09, 25 September 2015
Short description: | p1@LOC728084 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC728084_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NR_038385, uc001tax.1_5end |
EntrezGene: | LOC728084 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 4.09e-10 | 1 |
immature NK T cell | 4.09e-10 | 1 |
effector T cell | 4.09e-10 | 1 |
mature NK T cell | 4.09e-10 | 1 |
immature NK T cell stage IV | 4.09e-10 | 1 |
immature NK T cell stage I | 4.09e-10 | 1 |
immature NK T cell stage II | 4.09e-10 | 1 |
immature NK T cell stage III | 4.09e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.15e-09 | 1 |
extraosseous chondrosarcoma | 1.15e-09 | 1 |
myxoid chondrosarcoma | 1.15e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 1.15e-09 | 1 |