FFCP PHASE1:Hg19::chr5:141488481..141488500,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80762 | |EntrezGene=80762 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17592 | |HGNC=17592 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=104bp_to_ENST00000313129_5end | |association_with_transcript=104bp_to_ENST00000313129_5end | ||
|cluster_id=chr5:141488481..141488500,+ | |||
|description=CAGE_peak_2_at_NDFIP1_5end | |description=CAGE_peak_2_at_NDFIP1_5end | ||
|id=chr5:141488481..141488500,+ | |id=chr5:141488481..141488500,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.15e-26!115;UBERON:0001049!2.16e-13!57;UBERON:0005068!2.16e-13!57;UBERON:0006241!2.16e-13!57;UBERON:0007135!2.16e-13!57;UBERON:0005743!2.28e-12!86;UBERON:0001017!3.72e-12!82;UBERON:0002616!3.91e-12!59;UBERON:0000062!5.36e-12!511;UBERON:0003080!2.02e-11!42;UBERON:0000955!3.21e-11!69;UBERON:0006238!3.21e-11!69;UBERON:0002780!5.97e-11!41;UBERON:0001890!5.97e-11!41;UBERON:0006240!5.97e-11!41;UBERON:0000073!1.53e-10!94;UBERON:0001016!1.53e-10!94;UBERON:0001893!2.11e-10!34;UBERON:0002020!2.68e-10!34;UBERON:0003528!2.68e-10!34;UBERON:0001869!3.09e-10!32;UBERON:0000033!3.67e-10!123;UBERON:0002791!5.95e-10!33;UBERON:0000153!6.35e-10!129;UBERON:0007811!6.35e-10!129;UBERON:0004121!1.52e-09!169;UBERON:0003075!2.44e-09!86;UBERON:0007284!2.44e-09!86;UBERON:0002619!2.53e-09!22;UBERON:0001950!8.21e-09!20;UBERON:0000468!8.76e-09!659;UBERON:0000924!1.67e-08!173;UBERON:0006601!1.67e-08!173;UBERON:0000956!3.58e-08!25;UBERON:0000203!3.58e-08!25;UBERON:0002346!6.89e-08!90;UBERON:0003056!1.27e-07!61;UBERON:0000467!5.02e-07!625;UBERON:0000480!7.77e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.66e-09;32!UBERON:0002619;2.25e-09;22!UBERON:0003528;3.78e-09;34!UBERON:0002020;3.78e-09;34!UBERON:0001893;4.28e-09;34!UBERON:0002791;4.95e-09;32!UBERON:0001950;8.01e-09;20!UBERON:0002780;3.14e-08;41!UBERON:0001890;3.14e-08;41!UBERON:0000956;3.24e-08;25!UBERON:0000203;3.24e-08;25!UBERON:0007023;3.82e-08;114!UBERON:0000073;3.06e-07;53!UBERON:0002616;3.06e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.28e-26,114;UBERON:0001049,5.46e-13,56;UBERON:0005068,5.46e-13,56;UBERON:0006241,5.46e-13,56;UBERON:0007135,5.46e-13,56;UBERON:0000073,2.47e-12,53;UBERON:0002616,2.47e-12,53;UBERON:0001017,1.52e-11,81;UBERON:0002780,5.31e-11,41;UBERON:0001890,5.31e-11,41;UBERON:0003080,5.31e-11,41;UBERON:0006240,5.31e-11,41;UBERON:0000955,9.08e-11,68;UBERON:0006238,9.08e-11,68;UBERON:0001893,1.89e-10,34;UBERON:0003528,2.40e-10,34;UBERON:0002020,2.40e-10,34;UBERON:0001869,2.77e-10,32;UBERON:0003075,7.54e-10,82;UBERON:0007284,7.54e-10,82;UBERON:0002791,1.03e-09,32;UBERON:0001016,1.14e-09,89;UBERON:0002619,2.29e-09,22;UBERON:0010314,3.14e-09,132;UBERON:0004121,4.57e-09,171;UBERON:0000924,4.57e-09,171;UBERON:0006601,4.57e-09,171;UBERON:0001950,7.51e-09,20;UBERON:0010371,2.17e-08,104;UBERON:0002346,2.40e-08,86;UBERON:0000956,3.29e-08,25;UBERON:0000203,3.29e-08,25;UBERON:0003056,1.27e-07,61 | |||
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| ||
|short_description=p2@NDFIP1 | |short_description=p2@NDFIP1 | ||
}} | }} |
Latest revision as of 06:11, 25 September 2015
Short description: | p2@NDFIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NDFIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 104bp_to_ENST00000313129_5end |
EntrezGene: | NDFIP1 |
HGNC: | 17592 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.28e-26 | 114 |
neural tube | 5.46e-13 | 56 |
neural rod | 5.46e-13 | 56 |
future spinal cord | 5.46e-13 | 56 |
neural keel | 5.46e-13 | 56 |
regional part of nervous system | 2.47e-12 | 53 |
regional part of brain | 2.47e-12 | 53 |
central nervous system | 1.52e-11 | 81 |
regional part of forebrain | 5.31e-11 | 41 |
forebrain | 5.31e-11 | 41 |
anterior neural tube | 5.31e-11 | 41 |
future forebrain | 5.31e-11 | 41 |
brain | 9.08e-11 | 68 |
future brain | 9.08e-11 | 68 |
telencephalon | 1.89e-10 | 34 |
brain grey matter | 2.40e-10 | 34 |
gray matter | 2.40e-10 | 34 |
cerebral hemisphere | 2.77e-10 | 32 |
neural plate | 7.54e-10 | 82 |
presumptive neural plate | 7.54e-10 | 82 |
regional part of telencephalon | 1.03e-09 | 32 |
nervous system | 1.14e-09 | 89 |
regional part of cerebral cortex | 2.29e-09 | 22 |
structure with developmental contribution from neural crest | 3.14e-09 | 132 |
ectoderm-derived structure | 4.57e-09 | 171 |
ectoderm | 4.57e-09 | 171 |
presumptive ectoderm | 4.57e-09 | 171 |
neocortex | 7.51e-09 | 20 |
ecto-epithelium | 2.17e-08 | 104 |
neurectoderm | 2.40e-08 | 86 |
cerebral cortex | 3.29e-08 | 25 |
pallium | 3.29e-08 | 25 |
pre-chordal neural plate | 1.27e-07 | 61 |