FFCP PHASE1:Hg19::chr9:130743256..130743286,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=399665 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31419 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T9C2 | |||
|association_with_transcript=-444bp_to_ENST00000464641,NM_001035254_5end | |||
|cluster_id=chr9:130743256..130743286,- | |||
|description=CAGE_peak_1_at_FAM102A_5end | |||
|id=chr9:130743256..130743286,- | |||
|ontology_enrichment_celltype=CL:0000791!2.50e-11!18;CL:0000789!2.50e-11!18;CL:0002420!2.50e-11!18;CL:0002419!2.50e-11!18;CL:0000790!2.50e-11!18;CL:0000838!1.31e-07!52;CL:0000625!1.35e-07!11;CL:0000084!1.80e-07!25;CL:0000827!1.80e-07!25;CL:0000542!3.75e-07!53;CL:0000051!3.75e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.34e-11;18!CL:0000789;2.34e-11;18!CL:0002419;2.34e-11;18!CL:0000625;1.31e-07;11!CL:0000084;1.96e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.50e-11,18;CL:0000789,2.50e-11,18;CL:0002420,2.50e-11,18;CL:0002419,2.50e-11,18;CL:0000790,2.50e-11,18;CL:0000838,1.31e-07,52;CL:0000625,1.35e-07,11;CL:0000084,1.80e-07,25;CL:0000827,1.80e-07,25;CL:0000542,3.75e-07,53;CL:0000051,3.75e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;2.34e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.75e-28!115;UBERON:0001049!2.27e-15!57;UBERON:0005068!2.27e-15!57;UBERON:0006241!2.27e-15!57;UBERON:0007135!2.27e-15!57;UBERON:0003080!1.97e-13!42;UBERON:0002780!3.09e-13!41;UBERON:0001890!3.09e-13!41;UBERON:0006240!3.09e-13!41;UBERON:0005743!1.98e-12!86;UBERON:0001017!4.49e-12!82;UBERON:0002020!9.00e-12!34;UBERON:0003528!9.00e-12!34;UBERON:0001893!9.43e-12!34;UBERON:0000073!1.82e-11!94;UBERON:0001016!1.82e-11!94;UBERON:0002616!2.18e-11!59;UBERON:0002791!2.20e-11!33;UBERON:0001869!1.28e-10!32;UBERON:0000955!1.98e-10!69;UBERON:0006238!1.98e-10!69;UBERON:0003075!8.37e-10!86;UBERON:0007284!8.37e-10!86;UBERON:0002346!4.38e-09!90;UBERON:0002619!1.97e-08!22;UBERON:0003056!8.28e-08!61;UBERON:0001950!1.31e-07!20;UBERON:0000956!2.99e-07!25;UBERON:0000203!2.99e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.61e-10;34!UBERON:0003528;5.21e-10;34!UBERON:0002020;5.21e-10;34!UBERON:0002791;7.33e-10;32!UBERON:0002780;8.20e-10;41!UBERON:0001890;8.20e-10;41!UBERON:0001869;1.11e-09;32!UBERON:0002619;1.90e-08;22!UBERON:0000073;3.93e-08;53!UBERON:0002616;3.93e-08;53!UBERON:0007023;1.04e-07;114!UBERON:0001950;1.25e-07;20!UBERON:0000956;2.91e-07;25!UBERON:0000203;2.91e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.12e-27,114;UBERON:0001049,3.65e-15,56;UBERON:0005068,3.65e-15,56;UBERON:0006241,3.65e-15,56;UBERON:0007135,3.65e-15,56;UBERON:0000073,8.93e-14,53;UBERON:0002616,8.93e-14,53;UBERON:0002780,3.09e-13,41;UBERON:0001890,3.09e-13,41;UBERON:0003080,3.09e-13,41;UBERON:0006240,3.09e-13,41;UBERON:0001017,7.16e-12,81;UBERON:0003528,9.00e-12,34;UBERON:0002020,9.00e-12,34;UBERON:0001893,9.42e-12,34;UBERON:0001016,6.70e-11,89;UBERON:0002791,8.32e-11,32;UBERON:0001869,1.28e-10,32;UBERON:0000955,3.13e-10,68;UBERON:0006238,3.13e-10,68;UBERON:0003075,1.63e-09,82;UBERON:0007284,1.63e-09,82;UBERON:0002346,8.65e-09,86;UBERON:0002619,1.97e-08,22;UBERON:0003056,4.82e-08,61;UBERON:0011216,7.03e-08,223;UBERON:0001950,1.31e-07,20;UBERON:0000956,2.99e-07,25;UBERON:0000203,2.99e-07,25 | |||
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| |||
|short_description=p1@FAM102A | |||
}} |
Latest revision as of 06:43, 25 September 2015
Short description: | p1@FAM102A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM102A_5end |
Coexpression cluster: | NA |
Association with transcript: | -444bp_to_ENST00000464641, NM_001035254_5end |
EntrezGene: | FAM102A |
HGNC: | 31419 |
UniProt: | Q5T9C2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.50e-11 | 18 |
alpha-beta T cell | 2.50e-11 | 18 |
immature T cell | 2.50e-11 | 18 |
mature T cell | 2.50e-11 | 18 |
immature alpha-beta T cell | 2.50e-11 | 18 |
lymphoid lineage restricted progenitor cell | 1.31e-07 | 52 |
CD8-positive, alpha-beta T cell | 1.35e-07 | 11 |
T cell | 1.80e-07 | 25 |
pro-T cell | 1.80e-07 | 25 |
lymphocyte | 3.75e-07 | 53 |
common lymphoid progenitor | 3.75e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.12e-27 | 114 |
neural tube | 3.65e-15 | 56 |
neural rod | 3.65e-15 | 56 |
future spinal cord | 3.65e-15 | 56 |
neural keel | 3.65e-15 | 56 |
regional part of nervous system | 8.93e-14 | 53 |
regional part of brain | 8.93e-14 | 53 |
regional part of forebrain | 3.09e-13 | 41 |
forebrain | 3.09e-13 | 41 |
anterior neural tube | 3.09e-13 | 41 |
future forebrain | 3.09e-13 | 41 |
central nervous system | 7.16e-12 | 81 |
brain grey matter | 9.00e-12 | 34 |
gray matter | 9.00e-12 | 34 |
telencephalon | 9.42e-12 | 34 |
nervous system | 6.70e-11 | 89 |
regional part of telencephalon | 8.32e-11 | 32 |
cerebral hemisphere | 1.28e-10 | 32 |
brain | 3.13e-10 | 68 |
future brain | 3.13e-10 | 68 |
neural plate | 1.63e-09 | 82 |
presumptive neural plate | 1.63e-09 | 82 |
neurectoderm | 8.65e-09 | 86 |
regional part of cerebral cortex | 1.97e-08 | 22 |
pre-chordal neural plate | 4.82e-08 | 61 |
organ system subdivision | 7.03e-08 | 223 |
neocortex | 1.31e-07 | 20 |
cerebral cortex | 2.99e-07 | 25 |
pallium | 2.99e-07 | 25 |