FFCP PHASE1:Hg19::chr8:11706585..11706619,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=1508 | |EntrezGene=1508 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=2527 | |HGNC=2527 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=F5H2P9 | |UniProt=F5H2P9 | ||
|association_with_transcript=-373bp_to_ENST00000420692,ENST00000540571,uc003wul.2_5end | |association_with_transcript=-373bp_to_ENST00000420692,ENST00000540571,uc003wul.2_5end | ||
|cluster_id=chr8:11706585..11706619,- | |||
|coexpression_cluster_id=C71 | |coexpression_cluster_id=C71 | ||
|description=CAGE_peak_2_at_CTSB_5end | |description=CAGE_peak_2_at_CTSB_5end | ||
Latest revision as of 07:16, 25 September 2015
| Short description: | p2@CTSB |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_CTSB_5end |
| Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
| Association with transcript: | -373bp_to_ENST00000420692, ENST00000540571, uc003wul.2_5end |
| EntrezGene: | CTSB |
| HGNC: | 2527 |
| UniProt: | F5H2P9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@CTSB |
|---|
0
25
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125
150
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| monopoietic cell | 3.53e-16 | 59 |
| monocyte | 3.53e-16 | 59 |
| monoblast | 3.53e-16 | 59 |
| promonocyte | 3.53e-16 | 59 |
| defensive cell | 1.28e-15 | 48 |
| phagocyte | 1.28e-15 | 48 |
| macrophage dendritic cell progenitor | 5.36e-15 | 61 |
| myeloid lineage restricted progenitor cell | 2.04e-12 | 66 |
| granulocyte monocyte progenitor cell | 5.87e-12 | 67 |
| classical monocyte | 1.62e-11 | 42 |
Showing 1 to 10 of 18 entries
| Ontology term | p-value | n |
|---|---|---|
| mesoderm | 2.81e-17 | 315 |
| mesoderm-derived structure | 2.81e-17 | 315 |
| presumptive mesoderm | 2.81e-17 | 315 |
| musculoskeletal system | 1.36e-13 | 167 |
| lateral plate mesoderm | 1.55e-12 | 203 |
| bone marrow | 2.11e-11 | 76 |
| skeletal system | 2.47e-11 | 100 |
| skeletal element | 7.13e-11 | 90 |
| bone element | 8.42e-10 | 82 |
| immune system | 1.10e-09 | 93 |
Showing 1 to 10 of 17 entries
