FFCP PHASE1:Hg19::chr7:116139649..116139711,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=858 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1528 | |||
|TSSclassifier=strong | |||
|UniProt=P51636,Q53X57 | |||
|association_with_transcript=0bp_to_NM_001206747,NM_001233,NM_198212_5end | |||
|cluster_id=chr7:116139649..116139711,+ | |||
|coexpression_cluster_id=C2874 | |||
|description=CAGE_peak_2_at_CAV2_5end | |||
|id=chr7:116139649..116139711,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.44e-18!254;CL:0000220!1.07e-17!246;CL:0002321!4.17e-17!248;CL:0000055!1.24e-12!180;CL:0000057!2.40e-11!75;CL:0000076!1.79e-10!62;CL:0000222!2.62e-10!119;CL:0002076!9.24e-09!43;CL:0000136!9.53e-09!15;CL:0000548!8.58e-07!679;CL:0000004!8.58e-07!679;CL:0000255!8.58e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.11e-08;13!CL:0002076;9.81e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.22e-17,253;CL:0002321,3.27e-17,250;CL:0000057,1.30e-11,76;CL:0000222,8.10e-11,121;CL:0000076,8.23e-11,63;CL:0000136,8.14e-09,15;CL:0002076,1.59e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.75e-13!365;UBERON:0002100!5.94e-13!216;UBERON:0000468!1.39e-12!659;UBERON:0003102!2.13e-12!95;UBERON:0000483!1.61e-10!309;UBERON:0000119!1.64e-10!312;UBERON:0003104!4.16e-10!238;UBERON:0009142!4.16e-10!238;UBERON:0005256!5.53e-10!143;UBERON:0004923!6.51e-10!57;UBERON:0000481!6.91e-10!347;UBERON:0000467!7.72e-10!625;UBERON:0000480!8.95e-10!626;UBERON:0003914!1.50e-08!118;UBERON:0000486!2.44e-08!82;UBERON:0004119!3.19e-08!169;UBERON:0000925!3.19e-08!169;UBERON:0006595!3.19e-08!169;UBERON:0000064!7.27e-08!219;UBERON:0000490!8.22e-08!138;UBERON:0004872!1.39e-07!84;UBERON:0000477!1.51e-07!286;UBERON:0000914!2.19e-07!83;UBERON:0002329!2.19e-07!83;UBERON:0003077!2.19e-07!83;UBERON:0003059!2.19e-07!83;UBERON:0007282!2.19e-07!83;UBERON:0009618!2.19e-07!83;UBERON:0007285!2.19e-07!83;UBERON:0002049!4.20e-07!79;UBERON:0007798!4.20e-07!79;UBERON:0000055!4.30e-07!69;UBERON:0002199!4.89e-07!45;UBERON:0002416!4.89e-07!45;UBERON:0005631!5.94e-07!14;UBERON:0000158!5.94e-07!14;UBERON:0004111!6.64e-07!241;UBERON:0000464!7.43e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0004923;6.75e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.02e-14,99;UBERON:0004923,2.14e-11,66;UBERON:0002100,2.15e-11,199;UBERON:0000483,3.45e-10,306;UBERON:0000119,3.50e-10,309;UBERON:0000490,5.88e-09,148;UBERON:0003914,1.72e-08,117;UBERON:0000486,1.79e-08,83;UBERON:0004119,5.00e-08,160;UBERON:0000925,5.00e-08,160;UBERON:0006595,5.00e-08,160;UBERON:0004872,2.00e-07,83;UBERON:0002199,2.71e-07,46;UBERON:0002416,2.71e-07,46;UBERON:0005256,2.77e-07,122;UBERON:0003104,2.86e-07,160;UBERON:0009142,2.86e-07,160;UBERON:0005631,5.27e-07,14;UBERON:0000158,5.27e-07,14;UBERON:0007503,6.14e-07,78;UBERON:0002049,6.45e-07,78;UBERON:0007798,6.45e-07,78;UBERON:0000055,6.74e-07,68 | |||
|phase1_expression=80.6652003961271,105.551558278255,85.8412320944464,61.0447119954096,50.5066036702835,22.6808016266096,65.8579683237607,45.4838308867318,77.3109459471522,34.4027511102112,17.4450291993107,48.7124259850284,60.6664049925443,10.520140001604,18.2268556650354,21.5144046864568,10.8485015044316,16.0668219885222,20.9811103479918,16.251979666136,14.484049078342,18.4938285672072,25.475002854664,19.8467916355682,27.1172101524774,1.75750833220288,1.72411237844886,0.944529375764151,1.18009283054671,0,2.63187409637329,22.9855306119732,30.7230037153815,22.554994620174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3806866313962,4.02420515822182,31.4541902135085,31.0837671050727,21.5575301573433,32.3007737282637,15.1104329939709,13.1391414981712,20.2304508731105,10.6430110782031,14.3170700679795,14.2767192292507,48.4512733429081,37.4492287212274,0,0,0.132957960518865,0.238490624305342,0,0,13.9133685156694,17.2046919021225,21.1755705980633,37.3103241669846,16.3604780121863,26.4113320262465,17.1375872560185,44.4476825771246,54.4322381910667,49.8733713019359,33.8376626371683,25.8492515944294,44.9074185888632,40.0752757576997,15.3926970097534,22.3249320710199,14.594409220701,18.1304483578149,13.7984973719295,14.2389848935219,31.6939016999605,0,0,56.6922267785295,38.2668402805395,25.1994718212514,10.7251436458707,12.6208113129478,31.9201543978521,20.7450712052654,5.33744978648525,29.6001058100592,18.672662123986,16.4347019925019,12.7500284428498,7.56787138224657,4.60940739583999,21.7918931605431,39.956489834281,15.9732110032446,57.3882933318916,53.6675658802005,31.2414782630494,33.7081936085396,25.9275797493714,14.9857867120357,18.9086179551651,30.8880742893334,27.1993622206413,46.4182294588393,25.8702531053846,17.843628079131,17.0161187025871,45.7155790548902,24.5827467693269,16.8568287689461,24.7892797195885,24.9550802952046,12.9160537695981,36.3047560991565,56.585817609603,22.8069233024146,46.0644805695822,10.0479810617795,37.4094881226496,16.7088568918854,24.5541253006221,9.34004964703224,26.4183209103399,14.7097911705119,24.850671476163,71.130981348714,28.4861795081619,34.5936927162301,48.8215555857594,45.8887352622406,0.487894824518382,0.397589304964456,0.813357600086629,1.34759371519982,2.01856680700503,0,4.69348596989448,22.513432836751,6.90674606762403,22.754028473567,23.8220228950963,19.9938492067336,22.2531790903094,21.6909926895134,23.2720282465351,23.9667388501647,18.0325670524433,14.2921186649774,13.3430596285235,15.3898862778556,16.9775754563669,22.4386838085513,39.5111050878144,19.1111324801205,10.1404027857465,1.96565443335525,5.31710916013264,0,5.90344505006945,26.76457840657,55.09464327513,24.7283857166763,81.428467653421,83.051835307201,8.14520763275812,34.3178479142261,27.4229549848019,32.3445829880464,39.9189560401794,25.408494805949,17.1304639653346,24.162277333794,10.2726571734706,7.72637545885385,0,0.234004265139238,0.594524649154913,87.1724656077026,63.1612802027712,56.9935890914394,158.697702229447,86.6089136771607,45.2391561414949,0,0,0.621984346622316,0.288239906833923,0.12624243342638,10.4136546639157,4.20187268114105,2.34434894420094,8.55362230113526,9.04881935789247,1.20137223137567,13.7196687662678,9.9796665067371,9.15516144549888,16.134422880609,22.4932785418533,10.7296933755565,53.254073411028,68.3460959623117,48.8834953483421,35.7518250224377,26.9513350844229,43.6932373586403,21.4466990487221,5.96883765930587,8.23240336780769,58.3067769885786,12.4387182059891,11.087326221068,75.6612836419561,55.7781413504188,64.5825523036088,0,0,0,57.7495901734714,16.0806710167759,11.4109524032575,53.2795208536691,42.7390750904798,70.370958553279,0,0,0,0,10.1637849688985,7.8083912314573,9.27946575333234,4.35542289869307,11.4828975297569,0,0,0,12.8826066305097,7.00238729483548,12.2069260664881,42.8419974753463,50.4954038295968,29.3326491963119,50.9565155218302,15.3482510861137,4.5481500811197,25.8682678231262,31.2186031311655,22.6774077306295,50.1318455480838,10.1816601880625,13.7257369524342,0.206768026122887,0,0,22.1283127155769,48.2662774580442,38.4035672528694,52.1026396419431,35.7566397761185,48.5541963369217,50.6149639560019,61.4048698880044,55.8163106368318,8.90508398669946,48.8844729354418,50.249968263615,62.9915286625916,33.7515378969354,51.4811976577619,4.10922128611516,77.7965104776745,32.5045890943714,18.5999406026663,35.5077777613098,20.0620354887919,27.0719767744447,32.8855489435851,11.7652465376528,33.61202167025,55.8368116843312,35.2573490619779,37.59070886611,30.8759760026059,20.0495428497376,27.3655901919291,13.545623894081,29.0558951271344,27.4255082946479,15.8951075852747,0,0,10.2580050046556,5.576248976895,10.0867302345934,9.47977307159045,3.29650073346036,2.97034199714117,34.4559322797703,39.0036147621913,30.5299466703903,6.86362099874066,35.1230847021389,29.4727055474169,31.1510653815039,22.77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| |||
|short_description=p2@CAV2 | |||
}} |
Latest revision as of 07:19, 25 September 2015
Short description: | p2@CAV2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CAV2_5end |
Coexpression cluster: | C2874_mature_neuroblastoma_oral_pharyngeal_normal_neuroectodermal_mesothelioma |
Association with transcript: | 0bp_to_NM_001206747, NM_001233, NM_198212_5end |
EntrezGene: | CAV2 |
HGNC: | 1528 |
UniProt: | P51636Q53X57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.22e-17 | 253 |
embryonic cell | 3.27e-17 | 250 |
fibroblast | 1.30e-11 | 76 |
mesodermal cell | 8.10e-11 | 121 |
squamous epithelial cell | 8.23e-11 | 63 |
fat cell | 8.14e-09 | 15 |
endo-epithelial cell | 1.59e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
surface structure | 5.02e-14 | 99 |
organ component layer | 2.14e-11 | 66 |
trunk | 2.15e-11 | 199 |
epithelium | 3.45e-10 | 306 |
cell layer | 3.50e-10 | 309 |
unilaminar epithelium | 5.88e-09 | 148 |
epithelial tube | 1.72e-08 | 117 |
multilaminar epithelium | 1.79e-08 | 83 |
endoderm-derived structure | 5.00e-08 | 160 |
endoderm | 5.00e-08 | 160 |
presumptive endoderm | 5.00e-08 | 160 |
splanchnic layer of lateral plate mesoderm | 2.00e-07 | 83 |
integument | 2.71e-07 | 46 |
integumental system | 2.71e-07 | 46 |
trunk mesenchyme | 2.77e-07 | 122 |
mesenchyme | 2.86e-07 | 160 |
entire embryonic mesenchyme | 2.86e-07 | 160 |
extraembryonic membrane | 5.27e-07 | 14 |
membranous layer | 5.27e-07 | 14 |
epithelial vesicle | 6.14e-07 | 78 |
vasculature | 6.45e-07 | 78 |
vascular system | 6.45e-07 | 78 |
vessel | 6.74e-07 | 68 |