FFCP PHASE1:Hg19::chr17:46703491..46703497,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3219 | |EntrezGene=3219 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5120 | |HGNC=5120 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=116bp_to_AK056123_5end | |||
|cluster_id=chr17:46703491..46703497,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_12_at_HOXB9_5end | |||
|id=chr17:46703491..46703497,- | |||
|ontology_enrichment_celltype=CL:0000066!2.66e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000306;1.57e-09;4!CL:0002222;1.57e-09;4!CL:0002224;1.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.57e-09,4;CL:0002222,1.57e-09,4;CL:0002224,1.57e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!6.97e-20!239;DOID:162!1.24e-18!235;DOID:0050687!1.09e-16!143;DOID:305!8.93e-11!106;DOID:1749!9.94e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.07e-17;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,9.07e-18,2 | |||
|ontology_enrichment_uberon=UBERON:0002113!2.65e-11!27;UBERON:0003918!2.65e-11!27;UBERON:0005095!2.65e-11!27;UBERON:0007687!2.65e-11!27;UBERON:0000489!1.58e-10!32;UBERON:0006554!5.75e-08!44;UBERON:0001008!1.04e-07!45;UBERON:0006947!1.19e-07!3;UBERON:0004054!1.19e-07!3;UBERON:0005172!1.66e-07!55;UBERON:0005173!1.66e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.68e-30;10!UBERON:0000178;1.20e-20;15!UBERON:0000179;1.20e-20;15!UBERON:0000463;1.20e-20;15!UBERON:0000478;3.20e-13;24!UBERON:0002390;3.38e-10;32!UBERON:0010077;1.57e-09;4!UBERON:0005389;1.57e-09;4!UBERON:0000484;1.57e-09;4!UBERON:0000965;1.57e-09;4!UBERON:0001803;1.57e-09;4!UBERON:0000922;9.34e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.68e-30,10;UBERON:0000358,1.68e-30,10;UBERON:0000307,1.68e-30,10;UBERON:0000091,1.68e-30,10;UBERON:0000087,1.68e-30,10;UBERON:0007010,1.68e-30,10;UBERON:0007806,1.68e-30,10;UBERON:0008780,1.68e-30,10;UBERON:0005728,1.68e-30,10;UBERON:0000178,1.20e-20,15;UBERON:0000179,1.20e-20,15;UBERON:0000463,1.20e-20,15;UBERON:0000478,3.20e-13,24;UBERON:0010077,1.57e-09,4;UBERON:0005389,1.57e-09,4;UBERON:0000484,1.57e-09,4;UBERON:0002546,1.57e-09,4;UBERON:0000965,1.57e-09,4;UBERON:0001803,1.57e-09,4;UBERON:0003073,1.57e-09,4;UBERON:0005426,1.57e-09,4 | |||
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| ||
|short_description=p12@HOXB9 | |||
}} | }} |
Latest revision as of 07:37, 25 September 2015
Short description: | p12@HOXB9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_HOXB9_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 116bp_to_AK056123_5end |
EntrezGene: | HOXB9 |
HGNC: | 5120 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.57e-09 | 4 |
vertebrate lens cell | 1.57e-09 | 4 |
lens epithelial cell | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.68e-30 | 10 |
blastocyst | 1.68e-30 | 10 |
blastula | 1.68e-30 | 10 |
bilaminar disc | 1.68e-30 | 10 |
inner cell mass | 1.68e-30 | 10 |
cleaving embryo | 1.68e-30 | 10 |
connecting stalk | 1.68e-30 | 10 |
inner cell mass derived epiblast | 1.68e-30 | 10 |
extraembryonic mesoderm | 1.68e-30 | 10 |
blood | 1.20e-20 | 15 |
haemolymphatic fluid | 1.20e-20 | 15 |
organism substance | 1.20e-20 | 15 |
extraembryonic structure | 3.20e-13 | 24 |
cuboidal epithelium | 1.57e-09 | 4 |
transparent eye structure | 1.57e-09 | 4 |
simple cuboidal epithelium | 1.57e-09 | 4 |
cranial placode | 1.57e-09 | 4 |
lens of camera-type eye | 1.57e-09 | 4 |
epithelium of lens | 1.57e-09 | 4 |
lens placode | 1.57e-09 | 4 |
lens vesicle | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 9.07e-18 | 2 |