FFCP PHASE1:Mm9::chr7:104936999..104937092,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18479 | |EntrezGene=18479 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3585 | |||
|TSSclassifier=NA | |||
|UniProt=G3XA44,Q9R2B2 | |UniProt=G3XA44,Q9R2B2 | ||
|association_with_transcript=0bp_to_ENSMUST00000172423,uc009iju.1_5end | |association_with_transcript=0bp_to_ENSMUST00000172423,uc009iju.1_5end | ||
|cluster_id=chr7:104936999..104937092,+ | |||
|description=CAGE_peak_2_at_Pak1_5end | |description=CAGE_peak_2_at_Pak1_5end | ||
|id=chr7:104936999..104937092,+ | |id=chr7:104936999..104937092,+ | ||
|ontology_enrichment_celltype=CL:0002321!4.66e-14!70;CL:0000220!4.66e-14!70;CL:0000221!1.32e-13!44;CL:0000133!1.32e-13!44;CL:0002319!1.85e-13!43;CL:0000540!9.33e-13!33;CL:0000047!9.33e-13!33;CL:0000031!9.33e-13!33;CL:0000404!9.33e-13!33;CL:0000117!5.24e-12!23;CL:0000337!5.24e-12!23;CL:0000055!1.02e-10!50;CL:0000393!1.36e-10!39;CL:0000211!1.36e-10!39;CL:0002076!4.83e-07!15 | |ontology_enrichment_celltype=CL:0002321!4.66e-14!70;CL:0000220!4.66e-14!70;CL:0000221!1.32e-13!44;CL:0000133!1.32e-13!44;CL:0002319!1.85e-13!43;CL:0000540!9.33e-13!33;CL:0000047!9.33e-13!33;CL:0000031!9.33e-13!33;CL:0000404!9.33e-13!33;CL:0000117!5.24e-12!23;CL:0000337!5.24e-12!23;CL:0000055!1.02e-10!50;CL:0000393!1.36e-10!39;CL:0000211!1.36e-10!39;CL:0002076!4.83e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.87e-14,70;CL:0000221,1.28e-13,44;CL:0000133,1.28e-13,44;CL:0002319,1.79e-13,43;CL:0000540,9.05e-13,33;CL:0000047,9.05e-13,33;CL:0000031,9.05e-13,33;CL:0000404,9.05e-13,33;CL:0000117,5.10e-12,23;CL:0000337,5.10e-12,23;CL:0000393,1.32e-10,39;CL:0000211,1.32e-10,39;CL:0002076,4.76e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.34e-25!73;UBERON:0005743!3.34e-25!73;UBERON:0000073!3.37e-25!75;UBERON:0001016!3.37e-25!75;UBERON:0004121!4.20e-22!102;UBERON:0000924!4.20e-22!102;UBERON:0006601!4.20e-22!102;UBERON:0000955!2.84e-18!50;UBERON:0006238!2.84e-18!50;UBERON:0001049!3.45e-18!52;UBERON:0005068!3.45e-18!52;UBERON:0006241!3.45e-18!52;UBERON:0007135!3.45e-18!52;UBERON:0002616!1.41e-17!49;UBERON:0002346!2.08e-17!71;UBERON:0003075!2.08e-17!71;UBERON:0007284!2.08e-17!71;UBERON:0000033!3.96e-17!63;UBERON:0002020!3.18e-14!34;UBERON:0003080!8.12e-14!40;UBERON:0003056!1.93e-13!49;UBERON:0002780!3.11e-13!39;UBERON:0001890!3.11e-13!39;UBERON:0006240!3.11e-13!39;UBERON:0002791!2.03e-12!29;UBERON:0003528!2.03e-12!29;UBERON:0001893!2.03e-12!29;UBERON:0000064!3.87e-09!99;UBERON:0000344!1.45e-08!15;UBERON:0000956!2.57e-08!21;UBERON:0001869!2.57e-08!21;UBERON:0000203!2.57e-08!21;UBERON:0001242!1.19e-07!13;UBERON:0000060!1.19e-07!13;UBERON:0001262!1.19e-07!13;UBERON:0004786!1.19e-07!13;UBERON:0007811!1.21e-07!86;UBERON:0000153!4.01e-07!94;UBERON:0002619!7.23e-07!17 | |ontology_enrichment_uberon=UBERON:0001017!3.34e-25!73;UBERON:0005743!3.34e-25!73;UBERON:0000073!3.37e-25!75;UBERON:0001016!3.37e-25!75;UBERON:0004121!4.20e-22!102;UBERON:0000924!4.20e-22!102;UBERON:0006601!4.20e-22!102;UBERON:0000955!2.84e-18!50;UBERON:0006238!2.84e-18!50;UBERON:0001049!3.45e-18!52;UBERON:0005068!3.45e-18!52;UBERON:0006241!3.45e-18!52;UBERON:0007135!3.45e-18!52;UBERON:0002616!1.41e-17!49;UBERON:0002346!2.08e-17!71;UBERON:0003075!2.08e-17!71;UBERON:0007284!2.08e-17!71;UBERON:0000033!3.96e-17!63;UBERON:0002020!3.18e-14!34;UBERON:0003080!8.12e-14!40;UBERON:0003056!1.93e-13!49;UBERON:0002780!3.11e-13!39;UBERON:0001890!3.11e-13!39;UBERON:0006240!3.11e-13!39;UBERON:0002791!2.03e-12!29;UBERON:0003528!2.03e-12!29;UBERON:0001893!2.03e-12!29;UBERON:0000064!3.87e-09!99;UBERON:0000344!1.45e-08!15;UBERON:0000956!2.57e-08!21;UBERON:0001869!2.57e-08!21;UBERON:0000203!2.57e-08!21;UBERON:0001242!1.19e-07!13;UBERON:0000060!1.19e-07!13;UBERON:0001262!1.19e-07!13;UBERON:0004786!1.19e-07!13;UBERON:0007811!1.21e-07!86;UBERON:0000153!4.01e-07!94;UBERON:0002619!7.23e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.13e-25,73;UBERON:0001016,3.16e-25,75;UBERON:0004121,6.82e-23,95;UBERON:0000924,6.82e-23,95;UBERON:0006601,6.82e-23,95;UBERON:0000073,1.40e-19,54;UBERON:0002346,1.52e-18,64;UBERON:0003075,1.52e-18,64;UBERON:0007284,1.52e-18,64;UBERON:0001049,3.30e-18,52;UBERON:0005068,3.30e-18,52;UBERON:0006241,3.30e-18,52;UBERON:0007135,3.30e-18,52;UBERON:0010371,3.99e-17,73;UBERON:0000955,2.73e-16,47;UBERON:0006238,2.73e-16,47;UBERON:0002616,1.29e-15,46;UBERON:0002020,3.07e-14,34;UBERON:0003080,7.86e-14,40;UBERON:0003056,1.86e-13,49;UBERON:0002780,3.01e-13,39;UBERON:0001890,3.01e-13,39;UBERON:0006240,3.01e-13,39;UBERON:0003528,1.97e-12,29;UBERON:0002791,1.97e-12,29;UBERON:0001893,1.97e-12,29;UBERON:0000160,1.46e-11,31;UBERON:0011216,5.05e-11,194;UBERON:0000344,1.43e-08,15;UBERON:0000956,2.52e-08,21;UBERON:0001869,2.52e-08,21;UBERON:0000203,2.52e-08,21;UBERON:0005409,7.94e-08,47;UBERON:0001242,1.17e-07,13;UBERON:0001262,1.17e-07,13;UBERON:0004786,1.17e-07,13;UBERON:0002619,7.12e-07,17;UBERON:0010314,7.40e-07,92 | |||
|phase1_expression=14.0930985452219,70.1440569355116,63.699893514535,137.016287721994,136.744534275353,31.8970616632591,41.5830500260036,0.387369970324729,29.0024767632433,26.6833560007073,0.171217968225505,0.239316476986009,0,0,2.99798785634096,1.61980213911861,1.39912375625629,1.10411757875383,0.685572168028694,0.84877930359606,13.9470995847754,0.496454756004426,0.522399578277871,39.5181284299714,30.970252944068,40.7704694521664,39.6301036466349,40.0776492795754,62.7077284206034,50.910086211506,21.2861290229093,0,0,0,22.5304263405994,15.1273527276228,15.9252097884648,10.4632907684227,7.813353445238,12.0410461113974,22.3527965451785,18.442228093878,16.9928623560904,9.06457089424156,7.90740063512214,9.36088436024576,3.9119567217402,26.381043922034,19.552070263368,12.8323733389027,16.2384249085421,33.0630898039435,0.335565212115473,2.90144856804538,1.34437519656986,7.20326420900652,3.72493471920384,2.57836046138721,49.1628999888823,42.3192783417626,43.7343668419264,7.45457970552091,6.22506357277798,9.44894703145469,7.9109309005358,6.3943210345149,11.3848041996994,12.2949857702897,24.4707485048007,21.4659441947388,23.3460707100034,24.5659846587271,21.4242484723065,26.8254850280749,21.3735400370667,33.0918763179608,69.3730050296149,65.2482297615309,62.3642525020349,56.5792174362532,45.103408295988,46.3612899795516,50.2529398202486,35.4540444319958,53.3265884741067,20.6240009831567,23.7760706934502,33.7382996943794,9.76867893998074,11.3357340160178,6.95674772884027,0,0,0.539703191637817,0,0.448026887097336,7.72444310724635,17.8951838706961,12.2099422163348,17.666978725517,14.2251853974447,17.9657068380045,12.7402619853323,21.3320010945999,25.329451798312,24.8292668165597,24.2651733607096,14.5013527243206,8.2860122767095,8.90652834388949,6.24547176358089,8.52503339273995,8.07154240396205,6.63179618431539,8.81915303517786,10.8073268543521,15.8204779349999,0.144599356919912,3.5384422077995,5.82360659810673,3.3126227769059,3.87900202508178,16.775258509631,22.8369021669007,23.2485844562935,45.2158987719207,1.67741174308288,0.599902730993408,2.66847476853436,49.2811203641867,40.2600530480391,20.7329680986226,38.9366477230699,29.1515621356577,48.8301904714966,59.2180610197315,3.56437773476107,4.35424397135326,3.28539585963777,9.6803253707778,11.3204785377552,15.1735388926092,12.9644733459851,12.8099095160358,7.8241974024027,9.60852902136373,7.96464658757695,8.79591460512653,20.0478233427543,13.0483195315795,12.3165786914764,6.35667624039967,6.95118123063995,1.39300866608867,1.85203922767149,5.57295947091781,0.702213187313235,1.80143534980301,1.13665399758237,1.24275463521301,2.11073453982987,0.540186184383045,1.18372367792605,0.590292695242212,0.617068451549513,0.465067889500816,0,0.350296027101508,0.329119699826961,0,0,0.146199987425332,0.658650345873152,0,19.1363853193356,14.4066457330998,64.4316626818406,31.7340679996253,9.81125952462076,12.3085436086032,17.912577123771,17.5464666422308,11.5636582799333,17.5007576023554,30.3698599388487,14.822905925161,12.5667604400135,11.7384318504279,15.2071987952914,30.5598598942435,35.2305021295752,36.4428530055492,8.91439134479484,5.9409226557059,7.88954149711563,5.09128319613286,5.04276466635827,8.34616256694791,5.05892296994058,2.95220295959204,4.55296310739987,5.67626954040282,0.592905254174298,1.00107063429656,2.35870794135844,2.02375901146368,3.65148218499305,2.41177159752417,3.31013607315846,5.17853047411459,2.10775794807546,3.0201755450689,5.75072826109418,2.23284568601102,1.24815069245824,0,0.538192240565737,0.964887042726734,2.21703828199926,8.7166049414423,8.47417877498535,8.48725428875941,5.39787571063555,4.52266895092903,4.99891645860629,7.41507861859636,3.62560831444239,2.6575762757853,2.71073106717728,2.62181303545181,3.62638461918381,3.61622646453779,0,8.15858525728064,3.44234991113325,5.51873492609465,57.3165606256417,82.2826039877266,13.7705354116407,1.51482556322624,14.8288863125641,14.4462335389756,17.8801420118223,11.2315335037699,10.0259403337077,15.8522857241746,14.1683745586213,14.9050487534769,13.8350722281283,73.261260144172,3.26462195979018,6.23229612835393,4.56083486190013,5.77395430403874,1.32745138339963,9.71122544619926,3.62788268357701,4.14931175462976,2.06711325016541,2.76691633149535,7.49442050187841,3.63533729477506,3.20847640546249,1.8962205476149,0,1.03135543248187,18.0432991049508,13.8647042404109,16.0404767890616,13.2888961719587,8.51233121482913,9.27517851530767,6.74650984468696,8.82948352432338,3.52007562095566,19.9122146611991,7.71849393192367,16.488625294148,4.03661066739764,6.63442174209714,6.32673423216623,13.29541287935,23.3184669303881,62.4883267775418,2.73393409276564,2.68302928352189,2.96311243791539,2.82552685507037,3.2806614653046,1.83022538565218,4.24946074984638,4.05859211738608,2.62579950228405,5.72802370809068,14.7096237015228,14.0290432317526,11.4485661271109,10.8725913927524,13.538478952263,9.44050424693745,8.76126630688561,5.75863072364865,24.8860748720242,7.45607175704311,10.7101658349996,7.17679421011098,4.963754713712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| ||
|short_description=p2@Pak1 | |short_description=p2@Pak1 | ||
}} | }} |
Latest revision as of 13:44, 25 September 2015
Short description: | p2@Pak1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pak1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3585 |
Association with transcript: | 0bp_to_ENSMUST00000172423, uc009iju.1_5end |
EntrezGene: | Pak1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.87e-14 | 70 |
ectodermal cell | 1.28e-13 | 44 |
neurectodermal cell | 1.28e-13 | 44 |
neural cell | 1.79e-13 | 43 |
neuron | 9.05e-13 | 33 |
neuronal stem cell | 9.05e-13 | 33 |
neuroblast | 9.05e-13 | 33 |
electrically signaling cell | 9.05e-13 | 33 |
CNS neuron (sensu Vertebrata) | 5.10e-12 | 23 |
neuroblast (sensu Vertebrata) | 5.10e-12 | 23 |
electrically responsive cell | 1.32e-10 | 39 |
electrically active cell | 1.32e-10 | 39 |
endo-epithelial cell | 4.76e-07 | 15 |