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FFCP PHASE1:Mm9::chr7:104991427..104991490,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18479
|EntrezGene=18479
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=G5E884,O88643,Q8K0Z3
|UniProt=G5E884,O88643,Q8K0Z3
|association_with_transcript=0bp_to_ENSMUST00000033040,ENSMUST00000156637,NM_011035,uc009ijv.1,uc009ijw.1_5end
|association_with_transcript=0bp_to_ENSMUST00000033040,ENSMUST00000156637,NM_011035,uc009ijv.1,uc009ijw.1_5end
|cluster_id=chr7:104991427..104991490,+
|description=CAGE_peak_1_at_Pak1_5end
|description=CAGE_peak_1_at_Pak1_5end
|id=chr7:104991427..104991490,+
|id=chr7:104991427..104991490,+
|ontology_enrichment_celltype=CL:0000117!1.64e-11!23;CL:0000337!1.64e-11!23;CL:0000540!4.31e-09!33;CL:0000047!4.31e-09!33;CL:0000031!4.31e-09!33;CL:0000404!4.31e-09!33;CL:0000393!6.70e-07!39;CL:0000211!6.70e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.64e-11,23;CL:0000337,1.64e-11,23;CL:0000540,4.31e-09,33;CL:0000047,4.31e-09,33;CL:0000031,4.31e-09,33;CL:0000404,4.31e-09,33;CL:0000393,6.70e-07,39;CL:0000211,6.70e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.19e-18!52;UBERON:0005068!3.19e-18!52;UBERON:0006241!3.19e-18!52;UBERON:0007135!3.19e-18!52;UBERON:0001017!5.22e-18!73;UBERON:0005743!5.22e-18!73;UBERON:0000955!1.43e-17!50;UBERON:0006238!1.43e-17!50;UBERON:0002020!4.80e-17!34;UBERON:0002616!5.20e-17!49;UBERON:0000073!2.05e-16!75;UBERON:0001016!2.05e-16!75;UBERON:0000033!4.73e-16!63;UBERON:0002791!1.13e-14!29;UBERON:0003528!1.13e-14!29;UBERON:0001893!1.13e-14!29;UBERON:0002346!4.21e-14!71;UBERON:0003075!4.21e-14!71;UBERON:0007284!4.21e-14!71;UBERON:0003080!8.70e-14!40;UBERON:0002780!3.48e-13!39;UBERON:0001890!3.48e-13!39;UBERON:0006240!3.48e-13!39;UBERON:0004121!9.78e-13!102;UBERON:0000924!9.78e-13!102;UBERON:0006601!9.78e-13!102;UBERON:0003056!1.82e-12!49;UBERON:0007811!6.38e-12!86;UBERON:0000153!1.59e-11!94;UBERON:0000956!1.05e-10!21;UBERON:0001869!1.05e-10!21;UBERON:0000203!1.05e-10!21;UBERON:0002619!5.10e-09!17;UBERON:0002021!4.07e-08!10;UBERON:0000411!4.07e-08!10;UBERON:0001950!4.07e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.73e-19,54;UBERON:0001049,3.18e-18,52;UBERON:0005068,3.18e-18,52;UBERON:0006241,3.18e-18,52;UBERON:0007135,3.18e-18,52;UBERON:0001017,5.21e-18,73;UBERON:0002020,4.79e-17,34;UBERON:0001016,2.17e-16,75;UBERON:0000955,9.27e-16,47;UBERON:0006238,9.27e-16,47;UBERON:0002346,1.26e-15,64;UBERON:0003075,1.26e-15,64;UBERON:0007284,1.26e-15,64;UBERON:0002616,3.27e-15,46;UBERON:0003528,1.13e-14,29;UBERON:0002791,1.13e-14,29;UBERON:0001893,1.13e-14,29;UBERON:0010371,6.28e-14,73;UBERON:0003080,8.69e-14,40;UBERON:0004121,1.27e-13,95;UBERON:0000924,1.27e-13,95;UBERON:0006601,1.27e-13,95;UBERON:0002780,3.47e-13,39;UBERON:0001890,3.47e-13,39;UBERON:0006240,3.47e-13,39;UBERON:0003056,1.82e-12,49;UBERON:0000956,1.05e-10,21;UBERON:0001869,1.05e-10,21;UBERON:0000203,1.05e-10,21;UBERON:0002619,5.10e-09,17;UBERON:0002021,4.07e-08,10;UBERON:0000411,4.07e-08,10;UBERON:0001950,4.07e-08,10
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|phase1_expression=23.8621782186143,2.09385244583617,1.81999695755814,2.72217790176147,3.00537437967808,3.86122325397347,3.73780224952841,6.45616617207881,3.37892933164,1.40438715793196,0.34243593645101,0.239316476986009,5.47842335779858,3.2345548895029,3.33109761815663,5.4668322195253,2.79824751251259,5.20512572841092,4.66189074259512,5.51706547337439,35.0378355422407,0.496454756004426,0,7.1996590257033,7.11168771308227,2.8711598205751,2.58457197695445,1.939241094173,1.71021077510736,3.52842181663903,1.33038306393183,0,0,0,7.79899373328441,3.98963148860382,4.28755648150975,57.7573650416933,45.3174499823804,57.064088093144,81.17594534828,66.2554120409692,68.4569597773927,10.7012295279241,10.0363161907319,8.44315059943735,6.25913075478431,8.06693078607652,10.1055644057857,7.38833616482277,12.8787507895334,8.62515386189829,1.34226084846189,6.5282592781021,4.03312558970957,4.11615097657515,5.73066879877513,4.64104883049698,35.8100135721488,52.8990979272033,43.1005354384202,5.42151251310611,2.66788438833342,10.7987966073768,12.8552627133707,13.4991221839759,2.99600110518405,2.68952813725088,36.8098123695096,39.0167161778586,38.2791429659515,48.8463183330504,49.4745531731614,42.2593257291591,39.8717159435863,50.5570332635512,161.870345069101,163.567480087125,152.992107123218,41.2804080595507,45.3778712267952,42.1939830150976,141.266597494699,117.054622886589,107.264369939321,55.0955454835759,55.382583830851,45.295065335548,0.984440513331393,4.30757892608677,10.4351215932604,5.16254326188832,1.3599426674155,1.61910957491345,2.59910566979068,3.58421509677868,16.2915527352832,25.9054090318648,20.2633083590238,27.2071472372962,14.5068722369981,16.6824420638613,5.09610479413291,0,3.89683873820185,2.78695852022608,3.0331466700887,11.6467557313441,31.3314839213078,13.5082346548991,4.8575891494518,10.9607572192371,8.99400439298628,9.19408107370998,7.64326596382081,11.8126595849895,3.95511948374998,3.90418263683761,29.1921482143459,49.6624229338546,31.5803371398363,32.9715172131951,13.0474232852686,219.292816961649,263.69340387814,9.70736809792647,36.7832432233175,36.5940665905979,33.9277506285083,176.453373218881,98.8201302088233,81.6753288733619,302.801965774946,294.584206844541,136.93232136475,151.371098442218,10.4894544765826,26.74749868117,4.29628689337247,6.94458124425364,7.28674480591141,7.35686734187113,12.0641626969584,17.6324636867787,13.6753363294169,21.7793324484245,15.1796793786761,18.1092359517311,7.11374376678379,10.0226222488944,7.74184946321375,7.45265490253754,9.45360647367033,15.3230953269753,15.8452245034116,7.56330213910274,48.4527099246132,34.9993153676013,30.689657934724,4.14251545071004,3.28336483973535,2.88099298337624,2.60419209143731,2.36117078096885,2.62254091908543,0.465067889500816,1.60964040839772,1.40118410840603,2.13927804887525,1.14917224855367,1.37816976227955,2.04679982395465,3.73235195994786,3.22095405024892,157.717461423095,55.9801091343307,5.94753809370836,2.90895623329899,6.82522401712749,10.4506502337197,7.60318021800351,7.05892336181699,4.89231696458715,4.37518940058886,5.69434873853414,3.78807595865225,5.52937459360593,5.57078121715222,7.79856348476481,6.29173586057955,6.91641759599022,8.96135729644652,3.79335801906163,5.71242563048644,7.88954149711563,5.29493452397817,5.81857461502877,5.19005067188357,12.0781785907331,9.00421902675573,10.8329122210549,10.1185674415876,8.00422093135302,6.84064933435986,7.86235980452812,8.31989815823959,11.9687471619217,9.40590923034426,16.2960545140109,19.2756412092043,10.3766545136023,13.1789478330279,20.1275489138296,19.3513292787622,15.2898459826135,10.6083128737787,9.14926808961752,4.3419916922703,13.1174765018289,8.33762211790133,7.00749398700711,6.78980343100753,4.69380496577004,4.18765643604539,4.52282917683426,4.68320754858717,6.30540576424764,6.64394068946325,5.42146213435456,9.66793556822854,12.0879487306127,10.4147322178688,27.142431109069,74.5150786831632,5.90117127622843,10.4855963595798,176.445098396583,164.565207975453,0.163934945376675,49.9892435864659,6.94118082715765,5.85658116444958,8.83235930704476,13.6212214832955,9.35754431146055,14.4369030702305,12.5491317519217,11.3979784585412,13.8350722281283,98.6456441414948,8.51640511249612,10.3278050127008,9.44744364250741,14.1874305756381,5.30980553359851,8.74010290157933,6.34879469625977,4.90373207365335,5.61073596473468,5.53383266299069,4.9101375701962,5.45300594216258,11.7644134866958,3.16036757935816,2.10837217149998,2.06271086496374,41.5336319019621,6.84232157318979,6.46793418913772,6.43011105094777,10.6404140185364,12.4858172321449,10.0374902567294,10.656273219011,2.58138878870081,1.90648863777438,29.109748543255,13.6855589941428,8.39615018818709,7.90099316558842,6.80422360817878,6.56563598980245,5.53813589596716,141.294080132008,13.6696704638282,15.6854019652049,18.5194527369712,9.79515976424393,8.61173634642459,10.5237959675,44.3643702283962,43.6648531249813,37.3139929271944,22.9120948323627,6.32671987162271,10.1659733563424,9.07244862903131,8.36353184057875,9.17122767733946,7.68726774393478,10.579642332843,19.6316956488022,4.92536898508813,6.21339313086926,2.81846469342095,5.08356256549528,3.30916980914195,5.05573089694524,5.29555276258697,7.60302564708502,5.51579021635044,5.33837977860195,6.92071673209692,4.59009829569411,5.18454011264158,18.3286449964343,9.32535990334755,13.5578463457572,13.3818447667129,17.1865627840782,19.6694541233452,19.351467372715,20.2334652229171,20.3952228895258,21.261699056745,20.0644108422313,26.1187120382536,21.7438762107145,19.6353195665036,23.8066902795972,1.99787358036658,0.358855426437903,0.839423081820392,7.92077335531981,8.25802891985201,14.1026750685794,10.2896821957952,6.01886524842436,236.631022056551,232.464244436124,232.595578456395,225.299522052574,382.961128551789,426.042158127791,359.786992623553,353.952465734237,383.358478000637,372.269664149559,15.4643147900423,11.9707462020309,20.6587662962502,18.2330037801221,25.1535795153579,28.3119003013022,31.3367886200277,24.9302419259062,22.1434254618353,28.0493905057815,27.8827229879264,28.1053248665254,27.2496786737358,26.1222621811867,24.9844289956918,25.719859329286,27.6963539008205,25.0781986602817,20.6042950401653,28.9981872664763,27.4295401908332,28.396128985494,27.8970342238365,25.4356229106575,27.8563766029379,25.7228407990697,26.524556066552,26.5700408552221,25.1237610614844,24.6902599529405,26.3369740235667,24.823129558642,22.0984763311632,25.5645787956844,21.4126338189067,37.2217761127539,27.8378614050036,23.4209448912645,31.5625747913592,42.794735309186,49.8515846583906
|short_description=p1@Pak1
|short_description=p1@Pak1
}}
}}

Latest revision as of 13:46, 25 September 2015

Short description:p1@Pak1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pak1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000033040, ENSMUST00000156637, NM_011035, uc009ijv.1, uc009ijw.1_5end
EntrezGene:Pak1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pak1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G723.86
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.38
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.48
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.23
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.47
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.66
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A335.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.11
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.80
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G857.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H145.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H357.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G981.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H266.26
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H468.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.70
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.04
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.44
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.07
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.11
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.88
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.73
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C335.81
Mouse Granule cells, donor2.CNhs12357.11731-123E352.90
Mouse Granule cells, donor3.CNhs12108.11636-122C743.10
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C710.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E712.86
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D213.50
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D536.81
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F539.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D938.28
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F148.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D549.47
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D242.26
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F239.87
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D650.56
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3161.87
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3163.57
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7152.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D441.28
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F445.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D842.19
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4141.27
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5117.05
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6107.26
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D655.10
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F655.38
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E145.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F94.31
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.44
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A716.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I725.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E320.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I827.21
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H116.68
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.90
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.65
accessory axillary lymph node, adult.CNhs10475.1063-29H931.33
adrenal gland, adult.CNhs10508.49-24D713.51
adrenal gland, embryo E14.CNhs11038.406-44C54.86
adrenal gland, embryo E16.CNhs11004.1254-43D610.96
adrenal gland, embryo E17.CNhs11043.1263-45I18.99
adrenal gland, embryo E18.CNhs11026.1262-18F59.19
adrenal gland, neonate N00.CNhs11191.1311-23C17.64
adrenal gland, neonate N25.CNhs11223.1377-27I311.81
amnion, adult pregnant day17.5.CNhs10488.583-22A83.96
aorta, adult.CNhs10498.46-23H13.90
bone (os femoris), adult.CNhs10483.56-12G229.19
bone (os femoris), neonate N02.CNhs11227.1985-43F549.66
bone (os femoris), neonate N16.CNhs11225.1525-43A631.58
bone (os femoris), neonate N20.CNhs11195.1350-25C332.97
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B2219.29
cerebellum, neonate N30.CNhs11135.1395-42I2263.69
colon, adult.CNhs10468.36-18H79.71
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C736.78
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D136.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D433.93
corpora quadrigemina, adult.CNhs10501.16-22A4176.45
corpus striatum, adult.CNhs10487.19-21D898.82
corpus striatum, neonate N00.CNhs11226.630-43F181.68
cortex, adult.CNhs10473.12-14D5302.80
cortex, neonate N30.CNhs11107.1392-42F2294.58
diencephalon, adult.CNhs10482.20-12F2136.93
diencephalon, neonate N30.CNhs11201.1388-42B2151.37
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.49
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A226.75
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G46.94
eyeball, embryo E12.CNhs11016.345-16C67.29
eyeball, embryo E14.CNhs10521.399-16E27.36
eyeball, embryo E15.CNhs10593.426-16C912.06
eyeball, embryo E17.CNhs11023.1261-18D417.63
eyeball, neonate N00.CNhs11207.633-15C613.68
eyeball, neonate N01.CNhs11140.1532-43E721.78
eyeball, neonate N02.CNhs11205.1551-44G815.18
eyeball, neonate N16.CNhs11188.777-19A218.11
forelimb, embryo E11.CNhs10596.335-25E27.11
forelimb, embryo E12.CNhs10600.359-14H210.02
forelimb, embryo E13.CNhs10589.384-1E27.74
forelimb, embryo E14.CNhs10577.413-26A87.45
forelimb, embryo E15.CNhs11007.437-20E79.45
forelimb, embryo E17.CNhs10598.1517-43C415.32
forelimb, embryo E18.CNhs11008.1520-43B515.85
gonad, embryo E13.CNhs11044.1564-45I67.56
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C848.45
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D235.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D530.69
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I92.88
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C62.62
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G11.38
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D23.22
hippocampus, adult.CNhs10478.13-16E8157.72
hippocampus, neonate N00.CNhs11228.627-43G155.98
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I56.83
intestine, embryo E13.CNhs11010.381-16D510.45
intestine, embryo E15.CNhs10602.976-16D87.60
intestine, embryo E16.CNhs10585.463-22H47.06
intestine, embryo E17.CNhs10582.482-18D34.89
intestine, embryo E18.CNhs10526.1289-20F74.38
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E93.79
intestine, neonate N06.CNhs11102.688-20B85.53
intestine, neonate N07.CNhs11095.720-20F25.57
intestine, neonate N10.CNhs11098.755-23A57.80
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E36.92
intestine, neonate N30.CNhs11131.1384-42G18.96
kidney, embryo E14.CNhs10606.411-4I93.79
kidney, embryo E15.CNhs10997.434-16F85.71
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C75.82
kidney, neonate N00.CNhs11214.646-21G75.19
kidney, neonate N10.CNhs11206.758-6D512.08
kidney, neonate N20.CNhs11113.832-19I19.00
kidney, neonate N25.CNhs11122.1353-25F310.83
kidney, neonate N30.CNhs11203.1385-42H110.12
liver, adult pregnant day01.CNhs10466.508-5B28.00
liver, embryo E12.CNhs10601.355-15F86.84
liver, embryo E13.CNhs10524.378-3H67.86
liver, embryo E14.CNhs10594.409-16E18.32
liver, embryo E15.CNhs10520.433-16D711.97
liver, embryo E16.CNhs10523.462-17F59.41
liver, embryo E17.CNhs10510.481-18A316.30
liver, embryo E18.CNhs10579.499-43G419.28
liver, neonate N00.CNhs11117.641-24F410.38
liver, neonate N03.CNhs11123.1345-25G213.18
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H219.35
liver, neonate N10.CNhs11115.751-24B915.29
liver, neonate N20.CNhs11220.823-25A310.61
liver, neonate N25.CNhs11198.1368-26H19.15
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B113.12
lung, embryo E12.CNhs10522.354-16G28.34
lung, embryo E14.CNhs10604.404-26F87.01
lung, embryo E15.CNhs11020.432-17C56.79
lung, embryo E16.CNhs10998.458-17B64.69
lung, embryo E17.CNhs10605.480-44A64.19
lung, embryo E18.CNhs10583.1287-20I64.52
lung, neonate N00.CNhs11224.640-42C64.68
lung, neonate N06.CNhs11212.683-20E56.31
lung, neonate N07.CNhs11111.715-19A36.64
lung, neonate N10.CNhs11219.750-23E65.42
lung, neonate N20.CNhs11109.822-18A49.67
lung, neonate N25.CNhs11119.1359-25C712.09
lung, neonate N30.CNhs11133.1394-42H210.41
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A127.14
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A174.52
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H210.49
medulla oblongata, adult.CNhs10477.17-12C2176.45
medulla oblongata, neonate N30.CNhs11200.1396-42A3164.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C249.99
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.83
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.62
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D914.44
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.55
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.40
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.84
olfactory brain, adult.CNhs10489.18-22I998.65
ovary, adult.CNhs10507.91-2I78.52
ovary, embryo E18.CNhs11040.505-44H710.33
ovary, neonate N00.CNhs11217.1299-22I49.45
oviduct, adult pregnant day01.CNhs10500.988-6G614.19
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F48.74
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E54.90
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G94.91
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D811.76
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G841.53
pituitary gland, embryo E12.CNhs11018.346-16E66.84
pituitary gland, embryo E13.CNhs11009.370-44C76.47
pituitary gland, embryo E14.CNhs11037.398-44A56.43
pituitary gland, embryo E15.CNhs10592.427-16B910.64
pituitary gland, embryo E16.CNhs11036.449-43F612.49
pituitary gland, embryo E17.CNhs11039.1265-44F510.04
pituitary gland, neonate N00.CNhs11190.1308-22E910.66
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F829.11
skin, adult.CNhs10492.30-1C313.69
skin, neonate N00.CNhs11124.650-25G48.40
skin, neonate N03.CNhs11215.662-22H37.90
skin, neonate N06.CNhs11097.693-20I56.80
skin, neonate N10.CNhs11108.762-6C46.57
small intestine, neonate N16.CNhs11114.790-21I15.54
spinal cord, adult.CNhs10505.24-13C9141.29
spleen, adult.CNhs10465.25-2G213.67
spleen, embryo E16.CNhs11035.461-43C115.69
spleen, embryo E18.CNhs11011.1271-21F218.52
spleen, neonate N10.CNhs11116.752-24D19.80
spleen, neonate N20.CNhs11112.824-19H18.61
spleen, neonate N25.CNhs11099.1354-25G310.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C644.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C943.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D337.31
stomach, adult.CNhs10503.33-1H622.91
stomach, embryo E12.CNhs10588.356-43E36.33
stomach, embryo E15.CNhs10603.1252-16G810.17
stomach, embryo E16.CNhs11022.459-17D49.07
stomach, embryo E17.CNhs11006.1035-18D58.36
stomach, embryo E18.CNhs10999.1286-20C69.17
stomach, neonate N03.CNhs11193.1340-24B87.69
stomach, neonate N07.CNhs11210.718-18A910.58
stomach, neonate N25.CNhs11104.1355-25E419.63
stomach, neonate N30.CNhs11134.1386-42I14.93
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F55.08
testis, embryo E15.CNhs11034.443-27C53.31
testis, embryo E16.CNhs11033.470-26G55.06
testis, embryo E17.CNhs11029.486-18I55.30
testis, embryo E18.CNhs11027.503-18G57.60
testis, neonate N00.CNhs11189.1300-22B75.52
testis, neonate N07.CNhs11222.726-26I45.34
testis, neonate N10.CNhs11204.763-44D96.92
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E25.18
thymus, adult.CNhs10471.38-12B518.33
thymus, embryo E14.CNhs11041.402-44I49.33
thymus, embryo E15.CNhs11005.430-45I213.56
thymus, embryo E16.CNhs11002.456-26C513.38
thymus, embryo E17.CNhs10581.478-18C117.19
thymus, embryo E18.CNhs10595.1273-19G419.67
thymus, neonate N02.CNhs11181.1541-43F819.35
thymus, neonate N03.CNhs11137.2104-43C720.23
thymus, neonate N06.CNhs11197.681-26C420.40
thymus, neonate N07.CNhs11211.713-19D321.26
thymus, neonate N10.CNhs11194.748-24E420.06
thymus, neonate N20.CNhs11186.820-7A226.12
thymus, neonate N25.CNhs11125.1362-25G721.74
thymus, neonate N30.CNhs11132.1393-42G219.64
tongue, adult.CNhs10499.32-1B423.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E47.92
uterus, adult pregnant day19.CNhs10497.590-15F58.26
uterus, adult.CNhs10509.92-27E514.10
vagina, adult.CNhs10502.89-27D510.29
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1236.63
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2232.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3232.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7225.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4382.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5426.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6359.79
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7353.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8383.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9372.27
whole body, embryo E11.CNhs11014.324-5I815.46
whole body, embryo E12.CNhs10587.857-27C911.97
whole body, embryo E13.CNhs10512.372-23H220.66
whole body, embryo E14.5.CNhs10578.420-27D218.23
whole body, embryo E14.CNhs10519.395-14B125.15
whole body, embryo E16.CNhs10514.453-14F228.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G531.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G524.93
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G522.14
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G528.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G527.88
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G528.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G527.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G526.12
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G524.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G525.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G527.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G525.08
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G529.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G527.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G528.40
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G527.90
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G525.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G527.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G525.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G526.52
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G526.57
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G525.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G524.69
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G526.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G524.82
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G522.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G525.56
whole body, embryo E17.5.CNhs10513.490-9F921.41
whole body, embryo E17.CNhs10517.475-3I537.22
whole body, embryo E18.CNhs10516.493-3B327.84
whole body, neonate N00.CNhs10525.657-19C223.42
whole body, neonate N01.CNhs10576.659-23C631.56
whole body, neonate N06.CNhs10515.692-21D142.79
whole body, neonate N10.CNhs10518.761-6B449.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.64e-1123
neuroblast (sensu Vertebrata)1.64e-1123
neuron4.31e-0933
neuronal stem cell4.31e-0933
neuroblast4.31e-0933
electrically signaling cell4.31e-0933
electrically responsive cell6.70e-0739
electrically active cell6.70e-0739

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.73e-1954
neural tube3.18e-1852
neural rod3.18e-1852
future spinal cord3.18e-1852
neural keel3.18e-1852
central nervous system5.21e-1873
gray matter4.79e-1734
nervous system2.17e-1675
brain9.27e-1647
future brain9.27e-1647
neurectoderm1.26e-1564
neural plate1.26e-1564
presumptive neural plate1.26e-1564
regional part of brain3.27e-1546
brain grey matter1.13e-1429
regional part of telencephalon1.13e-1429
telencephalon1.13e-1429
ecto-epithelium6.28e-1473
anterior neural tube8.69e-1440
ectoderm-derived structure1.27e-1395
ectoderm1.27e-1395
presumptive ectoderm1.27e-1395
regional part of forebrain3.47e-1339
forebrain3.47e-1339
future forebrain3.47e-1339
pre-chordal neural plate1.82e-1249
cerebral cortex1.05e-1021
cerebral hemisphere1.05e-1021
pallium1.05e-1021
regional part of cerebral cortex5.10e-0917
occipital lobe4.07e-0810
visual cortex4.07e-0810
neocortex4.07e-0810
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