Personal tools

FFCP PHASE1:Mm9::chr7:104991549..104991569,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18479
|EntrezGene=18479
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=O88643,Q8K0Z3
|UniProt=O88643,Q8K0Z3
|association_with_transcript=100bp_to_NM_011035,uc009ijv.1,uc009ijw.1_5end
|association_with_transcript=100bp_to_NM_011035,uc009ijv.1,uc009ijw.1_5end
|cluster_id=chr7:104991549..104991569,+
|description=CAGE_peak_3_at_Pak1_5end
|description=CAGE_peak_3_at_Pak1_5end
|id=chr7:104991549..104991569,+
|id=chr7:104991549..104991569,+
|ontology_enrichment_celltype=CL:0000117!4.54e-13!23;CL:0000337!4.54e-13!23;CL:0000540!3.90e-11!33;CL:0000047!3.90e-11!33;CL:0000031!3.90e-11!33;CL:0000404!3.90e-11!33;CL:0000393!1.50e-08!39;CL:0000211!1.50e-08!39;CL:0000221!2.82e-07!44;CL:0000133!2.82e-07!44;CL:0002319!3.90e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,9.46e-18,23;CL:0000337,9.46e-18,23;CL:0000540,1.27e-12,33;CL:0000047,1.27e-12,33;CL:0000031,1.27e-12,33;CL:0000404,1.27e-12,33;CL:0000393,2.47e-09,39;CL:0000211,2.47e-09,39;CL:0002319,2.28e-08,43;CL:0000221,5.46e-08,44;CL:0000133,5.46e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!4.36e-25!63;UBERON:0001017!6.47e-24!73;UBERON:0005743!6.47e-24!73;UBERON:0001049!2.77e-23!52;UBERON:0005068!2.77e-23!52;UBERON:0006241!2.77e-23!52;UBERON:0007135!2.77e-23!52;UBERON:0000073!9.96e-23!75;UBERON:0001016!9.96e-23!75;UBERON:0000955!1.62e-22!50;UBERON:0006238!1.62e-22!50;UBERON:0002616!7.46e-22!49;UBERON:0004121!1.72e-21!102;UBERON:0000924!1.72e-21!102;UBERON:0006601!1.72e-21!102;UBERON:0002346!1.71e-20!71;UBERON:0003075!1.71e-20!71;UBERON:0007284!1.71e-20!71;UBERON:0003056!1.76e-19!49;UBERON:0002020!9.12e-19!34;UBERON:0003080!2.12e-18!40;UBERON:0002780!1.09e-17!39;UBERON:0001890!1.09e-17!39;UBERON:0006240!1.09e-17!39;UBERON:0002791!2.58e-16!29;UBERON:0003528!2.58e-16!29;UBERON:0001893!2.58e-16!29;UBERON:0007811!2.63e-14!86;UBERON:0000153!1.83e-13!94;UBERON:0000956!9.09e-12!21;UBERON:0001869!9.09e-12!21;UBERON:0000203!9.09e-12!21;UBERON:0002619!1.05e-09!17;UBERON:0002021!1.88e-08!10;UBERON:0000411!1.88e-08!10;UBERON:0001950!1.88e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.93e-28,54;UBERON:0001017,1.60e-26,73;UBERON:0001049,2.29e-26,52;UBERON:0005068,2.29e-26,52;UBERON:0006241,2.29e-26,52;UBERON:0007135,2.29e-26,52;UBERON:0002020,2.38e-25,34;UBERON:0001016,2.85e-25,75;UBERON:0002346,4.66e-25,64;UBERON:0003075,4.66e-25,64;UBERON:0007284,4.66e-25,64;UBERON:0000955,1.07e-22,47;UBERON:0006238,1.07e-22,47;UBERON:0004121,2.68e-22,95;UBERON:0000924,2.68e-22,95;UBERON:0006601,2.68e-22,95;UBERON:0003528,6.81e-22,29;UBERON:0002791,6.81e-22,29;UBERON:0001893,6.81e-22,29;UBERON:0002616,7.84e-22,46;UBERON:0010371,8.62e-21,73;UBERON:0003080,1.10e-19,40;UBERON:0003056,2.03e-19,49;UBERON:0002780,9.48e-19,39;UBERON:0001890,9.48e-19,39;UBERON:0006240,9.48e-19,39;UBERON:0000956,1.67e-15,21;UBERON:0001869,1.67e-15,21;UBERON:0000203,1.67e-15,21;UBERON:0010314,1.03e-13,92;UBERON:0002619,1.32e-12,17;UBERON:0002021,2.95e-11,10;UBERON:0000411,2.95e-11,10;UBERON:0001950,2.95e-11,10;UBERON:0002420,1.53e-07,8;UBERON:0007245,1.53e-07,8;UBERON:0010009,1.53e-07,8;UBERON:0010011,1.53e-07,8;UBERON:0000454,1.53e-07,8;UBERON:0003076,3.41e-07,12;UBERON:0003057,3.41e-07,12
|phase1_expression=2.7225304007815,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74190476664707,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0.588231488031014,0,0,0.125896817975577,0,0.183546752161682,0,0.218025156380447,0.439372365468944,0,0,1.43752564364972,0,0,0,0,0,0.515672092277442,4.24864567805155,5.28990979272033,4.43681982454325,0,0,0,0,0,0,0,4.14758449233911,4.05017814995072,3.78584930432488,3.14216082844184,3.3130281142742,6.61450315760752,5.07980996396653,6.43453150627015,15.4162233399144,17.4931653176707,15.5142598588806,5.27545150920775,4.11694396210843,4.16730696445408,18.7052609330925,9.56696437053856,10.0846843532695,4.71405736757868,5.26775218956681,4.28718725398191,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,1.82577746171277,2.21559419351475,1.03914401841148,1.06001872353102,0.845060518660083,0,0,0,0,0,0,0.79928715803342,0,0,0,0.608930956624282,0,0,0.587943535678524,0.502666365318702,0.247194967734374,0.144599356919912,0,4.36770494858005,1.76673214768315,2.90925151881133,0,28.1069565131085,29.5319856606972,0.255457055208591,0.599075622529601,0.599902730993408,0,29.9581278809645,21.0450277296568,10.3036568732549,38.4151747624931,34.5215867395946,16.4152555202052,18.8199865158599,0.509196819251581,0.248813941220186,0,0.631325567659422,0.260240885925407,0.459804208866946,1.26043490863744,1.20563854268572,1.02054748726992,2.43416068541215,1.59292931751539,1.29351685369508,0.431135985865684,0,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.823128545631774,0.199034266818493,0,0,0.284163499395593,0.207125772535502,0.469052119962192,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,24.1833440848746,9.46722433889417,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0,0,0,0,0.494096864172033,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.407302655690628,0.387904974335251,0.210407459670956,0.252946148497029,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.37898282354097,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,1.50791283939272,0,0,0,31.4679156376072,26.8414762296145,0,3.7870639080656,0,1.17131623288992,0.215423397732799,0.238968797952552,0.445597348164788,0,0.809621403349789,0.584511715822624,1.18586333383957,16.708708453934,0.283880170416537,0,0.325773918707152,0.659880491890142,0,0.242780636154981,0,0.188605079755898,0,0,0,0,1.42598951353889,0,0,0,3.74483566329167,0.36012218806262,1.16422815404479,0.428674070063185,0.354680467284547,0.713475270408282,0.658196082408484,0.913394847343798,0,0,5.07215315526412,0.32977250588296,0.484393280087717,0.482503399425247,0.119372344003136,0.328281799490123,0,32.4494278518392,0,0.619160603889667,0,0,0.136694227721025,0,0.339956859987711,0.139951452323658,0.276399947608848,0.954670618015114,0.158167996790568,1.01659733563424,0.648032044930808,0.836353184057875,0.218362563746178,0.404593039154462,0.41326727862668,2.6175594198403,0,1.24267862617385,0,0.149516546043979,0,0,0.258319646955462,0,0,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0.608175645870493,0.102710957164827,0,0.358053391334963,0,0.120195449519969,0,0.403865799792591,0.15241361331,0,0.194915761479505,0.192423683280659,0.116876902181569,3.85441652145859,0,0,0,0.19318959403219,0.187682475451182,1.09890974560359,0.214368379079066,0,25.9785847603851,25.7782132444019,25.2074025913335,25.0905646221784,38.364621107156,40.7912704590438,33.7511250115903,34.674732648265,47.1268105343573,41.9385852518974,0.830298780673413,2.79317411380722,1.02440163452481,1.70174701947806,2.30574478890781,1.10306105070008,2.00022055021454,2.26638562962784,2.24643446714271,1.76888048234658,0.50695859978048,1.32038438970253,1.40462261204824,1.98477972455095,2.1825478203133,1.90517476513229,2.31768651889711,2.31491064556446,2.06042950401653,2.94397840268795,4.11443102862498,1.95223386775271,2.38436189947321,1.59881058295561,1.78807822789128,2.36920902096694,2.74391959309159,2.36762740294059,3.12349461845482,2.24456908663095,2.25406534435931,2.36410757701352,1.63692417267876,1.54936841185966,2.12197272079256,3.49734809113124,1.16965804222704,1.07435527024149,3.25190164517034,4.85301122062934,3.94175320554716
|phase1_expression=2.7225304007815,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74190476664707,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0.588231488031014,0,0,0.125896817975577,0,0.183546752161682,0,0.218025156380447,0.439372365468944,0,0,1.43752564364972,0,0,0,0,0,0.515672092277442,4.24864567805155,5.28990979272033,4.43681982454325,0,0,0,0,0,0,0,4.14758449233911,4.05017814995072,3.78584930432488,3.14216082844184,3.3130281142742,6.61450315760752,5.07980996396653,6.43453150627015,15.4162233399144,17.4931653176707,15.5142598588806,5.27545150920775,4.11694396210843,4.16730696445408,18.7052609330925,9.56696437053856,10.0846843532695,4.71405736757868,5.26775218956681,4.28718725398191,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,1.82577746171277,2.21559419351475,1.03914401841148,1.06001872353102,0.845060518660083,0,0,0,0,0,0,0.79928715803342,0,0,0,0.608930956624282,0,0,0.587943535678524,0.502666365318702,0.247194967734374,0.144599356919912,0,4.36770494858005,1.76673214768315,2.90925151881133,0,28.1069565131085,29.5319856606972,0.255457055208591,0.599075622529601,0.599902730993408,0,29.9581278809645,21.0450277296568,10.3036568732549,38.4151747624931,34.5215867395946,16.4152555202052,18.8199865158599,0.509196819251581,0.248813941220186,0,0.631325567659422,0.260240885925407,0.459804208866946,1.26043490863744,1.20563854268572,1.02054748726992,2.43416068541215,1.59292931751539,1.29351685369508,0.431135985865684,0,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.823128545631774,0.199034266818493,0,0,0.284163499395593,0.207125772535502,0.469052119962192,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,24.1833440848746,9.46722433889417,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0,0,0,0,0.494096864172033,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.407302655690628,0.387904974335251,0.210407459670956,0.252946148497029,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.37898282354097,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,1.50791283939272,0,0,0,31.4679156376072,26.8414762296145,0,3.7870639080656,0,1.17131623288992,0.215423397732799,0.238968797952552,0.445597348164788,0,0.809621403349789,0.584511715822624,1.18586333383957,16.708708453934,0.283880170416537,0,0.325773918707152,0.659880491890142,0,0.242780636154981,0,0.188605079755898,0,0,0,0,1.42598951353889,0,0,0,3.74483566329167,0.36012218806262,1.16422815404479,0.428674070063185,0.354680467284547,0.713475270408282,0.658196082408484,0.913394847343798,0,0,5.07215315526412,0.32977250588296,0.484393280087717,0.482503399425247,0.119372344003136,0.328281799490123,0,32.4494278518392,0,0.619160603889667,0,0,0.136694227721025,0,0.339956859987711,0.139951452323658,0.276399947608848,0.954670618015114,0.158167996790568,1.01659733563424,0.648032044930808,0.836353184057875,0.218362563746178,0.404593039154462,0.41326727862668,2.6175594198403,0,1.24267862617385,0,0.149516546043979,0,0,0.258319646955462,0,0,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0.608175645870493,0.102710957164827,0,0.358053391334963,0,0.120195449519969,0,0.403865799792591,0.15241361331,0,0.194915761479505,0.192423683280659,0.116876902181569,3.85441652145859,0,0,0,0.19318959403219,0.187682475451182,1.09890974560359,0.214368379079066,0,25.9785847603851,25.7782132444019,25.2074025913335,25.0905646221784,38.364621107156,40.7912704590438,33.7511250115903,34.674732648265,47.1268105343573,41.9385852518974,0.830298780673413,2.79317411380722,1.02440163452481,1.70174701947806,2.30574478890781,1.10306105070008,2.00022055021454,2.26638562962784,2.24643446714271,1.76888048234658,0.50695859978048,1.32038438970253,1.40462261204824,1.98477972455095,2.1825478203133,1.90517476513229,2.31768651889711,2.31491064556446,2.06042950401653,2.94397840268795,4.11443102862498,1.95223386775271,2.38436189947321,1.59881058295561,1.78807822789128,2.36920902096694,2.74391959309159,2.36762740294059,3.12349461845482,2.24456908663095,2.25406534435931,2.36410757701352,1.63692417267876,1.54936841185966,2.12197272079256,3.49734809113124,1.16965804222704,1.07435527024149,3.25190164517034,4.85301122062934,3.94175320554716
|short_description=p3@Pak1
|short_description=p3@Pak1
}}
}}

Latest revision as of 13:46, 25 September 2015

Short description:p3@Pak1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Pak1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 100bp_to_NM_011035, uc009ijv.1, uc009ijw.1_5end
EntrezGene:Pak1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Pak1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.08
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.51
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.28
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.71
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.08
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B228.11
cerebellum, neonate N30.CNhs11135.1395-42I229.53
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A429.96
corpus striatum, adult.CNhs10487.19-21D821.05
corpus striatum, neonate N00.CNhs11226.630-43F110.30
cortex, adult.CNhs10473.12-14D538.42
cortex, neonate N30.CNhs11107.1392-42F234.52
diencephalon, adult.CNhs10482.20-12F216.42
diencephalon, neonate N30.CNhs11201.1388-42B218.82
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E824.18
hippocampus, neonate N00.CNhs11228.627-43G19.47
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C231.47
medulla oblongata, neonate N30.CNhs11200.1396-42A326.84
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I916.71
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F85.07
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C932.45
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B43.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A125.98
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A225.78
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A325.21
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A438.36
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A540.79
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A633.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A734.67
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A847.13
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A941.94
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D14.85
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.46e-1823
neuroblast (sensu Vertebrata)9.46e-1823
neuron1.27e-1233
neuronal stem cell1.27e-1233
neuroblast1.27e-1233
electrically signaling cell1.27e-1233
electrically responsive cell2.47e-0939
electrically active cell2.47e-0939
neural cell2.28e-0843
ectodermal cell5.46e-0844
neurectodermal cell5.46e-0844

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.93e-2854
central nervous system1.60e-2673
neural tube2.29e-2652
neural rod2.29e-2652
future spinal cord2.29e-2652
neural keel2.29e-2652
gray matter2.38e-2534
nervous system2.85e-2575
neurectoderm4.66e-2564
neural plate4.66e-2564
presumptive neural plate4.66e-2564
brain1.07e-2247
future brain1.07e-2247
ectoderm-derived structure2.68e-2295
ectoderm2.68e-2295
presumptive ectoderm2.68e-2295
brain grey matter6.81e-2229
regional part of telencephalon6.81e-2229
telencephalon6.81e-2229
regional part of brain7.84e-2246
ecto-epithelium8.62e-2173
anterior neural tube1.10e-1940
pre-chordal neural plate2.03e-1949
regional part of forebrain9.48e-1939
forebrain9.48e-1939
future forebrain9.48e-1939
cerebral cortex1.67e-1521
cerebral hemisphere1.67e-1521
pallium1.67e-1521
structure with developmental contribution from neural crest1.03e-1392
regional part of cerebral cortex1.32e-1217
occipital lobe2.95e-1110
visual cortex2.95e-1110
neocortex2.95e-1110
basal ganglion1.53e-078
nuclear complex of neuraxis1.53e-078
aggregate regional part of brain1.53e-078
collection of basal ganglia1.53e-078
cerebral subcortex1.53e-078
posterior neural tube3.41e-0712
chordal neural plate3.41e-0712
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:104991549..104991569,%2B&oldid=4194457"