FFCP PHASE1:Mm9::chr2:119114461..119114507,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=228545 | |EntrezGene=228545 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=247 | |MCL_coexpression_id=247 | ||
|TSSclassifier=NA | |||
|UniProt=Q8R307,E9PWR0,E9Q0R7,A2AV60,Q8BLK7 | |UniProt=Q8R307,E9PWR0,E9Q0R7,A2AV60,Q8BLK7 | ||
|association_with_transcript=0bp_to_ENSMUST00000037280,ENSMUST00000139367,ENSMUST00000170824,ENSMUST00000171090,NM_172269,uc008ltn.2,uc008lto.2_5end | |association_with_transcript=0bp_to_ENSMUST00000037280,ENSMUST00000139367,ENSMUST00000170824,ENSMUST00000171090,NM_172269,uc008ltn.2,uc008lto.2_5end | ||
|cluster_id=chr2:119114461..119114507,+ | |||
|description=CAGE_peak_1_at_Vps18_5end | |description=CAGE_peak_1_at_Vps18_5end | ||
|id=chr2:119114461..119114507,+ | |id=chr2:119114461..119114507,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.50e-13!50;CL:0000221!3.08e-12!44;CL:0000133!3.08e-12!44;CL:0002319!3.61e-12!43;CL:0000117!2.09e-10!23;CL:0000337!2.09e-10!23;CL:0000393!4.85e-09!39;CL:0000211!4.85e-09!39;CL:0000540!5.92e-08!33;CL:0000047!5.92e-08!33;CL:0000031!5.92e-08!33;CL:0000404!5.92e-08!33 | |ontology_enrichment_celltype=CL:0000055!3.50e-13!50;CL:0000221!3.08e-12!44;CL:0000133!3.08e-12!44;CL:0002319!3.61e-12!43;CL:0000117!2.09e-10!23;CL:0000337!2.09e-10!23;CL:0000393!4.85e-09!39;CL:0000211!4.85e-09!39;CL:0000540!5.92e-08!33;CL:0000047!5.92e-08!33;CL:0000031!5.92e-08!33;CL:0000404!5.92e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.08e-12,44;CL:0000133,3.08e-12,44;CL:0002319,3.61e-12,43;CL:0000117,2.09e-10,23;CL:0000337,2.09e-10,23;CL:0000393,4.85e-09,39;CL:0000211,4.85e-09,39;CL:0000540,5.92e-08,33;CL:0000047,5.92e-08,33;CL:0000031,5.92e-08,33;CL:0000404,5.92e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.05e-24!75;UBERON:0001016!3.05e-24!75;UBERON:0001017!2.58e-23!73;UBERON:0005743!2.58e-23!73;UBERON:0004121!1.07e-21!102;UBERON:0000924!1.07e-21!102;UBERON:0006601!1.07e-21!102;UBERON:0001049!2.70e-19!52;UBERON:0005068!2.70e-19!52;UBERON:0006241!2.70e-19!52;UBERON:0007135!2.70e-19!52;UBERON:0000955!6.84e-19!50;UBERON:0006238!6.84e-19!50;UBERON:0002616!2.22e-18!49;UBERON:0002346!5.05e-18!71;UBERON:0003075!5.05e-18!71;UBERON:0007284!5.05e-18!71;UBERON:0000033!5.66e-16!63;UBERON:0002020!1.24e-13!34;UBERON:0003080!2.40e-13!40;UBERON:0002780!7.54e-13!39;UBERON:0001890!7.54e-13!39;UBERON:0006240!7.54e-13!39;UBERON:0003056!3.42e-12!49;UBERON:0002791!1.50e-11!29;UBERON:0003528!1.50e-11!29;UBERON:0001893!1.50e-11!29;UBERON:0000956!1.14e-08!21;UBERON:0001869!1.14e-08!21;UBERON:0000203!1.14e-08!21;UBERON:0002619!9.50e-08!17;UBERON:0000025!2.05e-07!114;UBERON:0004111!2.63e-07!122;UBERON:0003076!7.15e-07!12;UBERON:0003057!7.15e-07!12;UBERON:0000153!8.29e-07!94 | |ontology_enrichment_uberon=UBERON:0000073!3.05e-24!75;UBERON:0001016!3.05e-24!75;UBERON:0001017!2.58e-23!73;UBERON:0005743!2.58e-23!73;UBERON:0004121!1.07e-21!102;UBERON:0000924!1.07e-21!102;UBERON:0006601!1.07e-21!102;UBERON:0001049!2.70e-19!52;UBERON:0005068!2.70e-19!52;UBERON:0006241!2.70e-19!52;UBERON:0007135!2.70e-19!52;UBERON:0000955!6.84e-19!50;UBERON:0006238!6.84e-19!50;UBERON:0002616!2.22e-18!49;UBERON:0002346!5.05e-18!71;UBERON:0003075!5.05e-18!71;UBERON:0007284!5.05e-18!71;UBERON:0000033!5.66e-16!63;UBERON:0002020!1.24e-13!34;UBERON:0003080!2.40e-13!40;UBERON:0002780!7.54e-13!39;UBERON:0001890!7.54e-13!39;UBERON:0006240!7.54e-13!39;UBERON:0003056!3.42e-12!49;UBERON:0002791!1.50e-11!29;UBERON:0003528!1.50e-11!29;UBERON:0001893!1.50e-11!29;UBERON:0000956!1.14e-08!21;UBERON:0001869!1.14e-08!21;UBERON:0000203!1.14e-08!21;UBERON:0002619!9.50e-08!17;UBERON:0000025!2.05e-07!114;UBERON:0004111!2.63e-07!122;UBERON:0003076!7.15e-07!12;UBERON:0003057!7.15e-07!12;UBERON:0000153!8.29e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.05e-24,75;UBERON:0001017,2.58e-23,73;UBERON:0000073,1.15e-20,54;UBERON:0004121,2.09e-20,95;UBERON:0000924,2.09e-20,95;UBERON:0006601,2.09e-20,95;UBERON:0001049,2.70e-19,52;UBERON:0005068,2.70e-19,52;UBERON:0006241,2.70e-19,52;UBERON:0007135,2.70e-19,52;UBERON:0002346,4.98e-17,64;UBERON:0003075,4.98e-17,64;UBERON:0007284,4.98e-17,64;UBERON:0000955,5.82e-17,47;UBERON:0006238,5.82e-17,47;UBERON:0002616,1.83e-16,46;UBERON:0010371,1.53e-14,73;UBERON:0002020,1.24e-13,34;UBERON:0003080,2.40e-13,40;UBERON:0002780,7.54e-13,39;UBERON:0001890,7.54e-13,39;UBERON:0006240,7.54e-13,39;UBERON:0010314,8.75e-13,92;UBERON:0003056,3.42e-12,49;UBERON:0003528,1.50e-11,29;UBERON:0002791,1.50e-11,29;UBERON:0001893,1.50e-11,29;UBERON:0000956,1.14e-08,21;UBERON:0001869,1.14e-08,21;UBERON:0000203,1.14e-08,21;UBERON:0002619,9.50e-08,17;UBERON:0000025,2.05e-07,114;UBERON:0004111,2.63e-07,122;UBERON:0003076,7.15e-07,12;UBERON:0003057,7.15e-07,12 | |||
|phase1_expression=7.68714466103011,9.77131141390211,6.3699893514535,3.32710632437513,3.50627010962443,6.37941233265181,7.47560449905682,6.97265946584512,2.111830832275,1.17032263160997,5.82141091966717,5.10541817570153,7.19043065711064,6.38168937658681,3.99731714178795,3.84703008040669,6.29605690315332,12.9339487796877,11.2433835556706,13.1560792057389,7.313722952992,13.9007331681239,11.7539905112521,8.31960598525715,7.79991555628378,5.16808767703518,5.59990595006797,4.95583835177545,6.65081968097309,5.29263272495855,6.65191531965914,10.1604907753541,9.84103660135312,0,1.44425809875637,2.99222361645286,2.45003227514843,20.5080499061085,4.6880120671428,22.5115209908733,22.3527965451785,15.0270006690858,20.3914348273085,10.4494358919729,11.4555932278051,11.3798986340243,22.6893489860931,11.9913836009246,11.643367684927,13.8045228342741,11.0589273084036,20.125359011096,17.9527388481778,7.25362142011344,9.07453257684653,10.5476368774738,11.1748041576115,9.7977697532714,19.8270131642406,14.2827564403449,15.8457850876545,16.6033820713875,13.3394219416671,55.343832612806,55.3765163037506,56.838409195688,32.6564120465061,24.5899715405795,11.509546966241,10.6654691282036,11.3575479129746,16.5677570954206,15.6816664075646,9.30930074033651,17.9231030804102,17.4651569455904,22.0231761998777,19.4084753889485,24.2698322544865,12.7929699098288,16.8337264228434,8.33461392890816,22.6138229191119,21.9477417912355,22.6141406709679,12.0797720044204,15.0913981647049,11.7431650869939,13.176357639974,13.5273092591146,7.24661221754194,8.60423876981386,7.47968467078526,11.873470216032,9.09686984426737,2.68816132258401,7.02222100658759,8.52151612890289,7.79358013808606,12.7202246823722,9.85903938436764,6.41632387071589,0,0,6.061749148314,8.61423542615335,3.53867111510348,5.36664234679582,8.54495016035667,8.31275978763019,9.88866362566974,8.52503339273995,13.3756988408514,10.7013074792362,11.4061045921634,11.3099932196708,15.5732829672656,4.916378135277,7.07688441559899,6.47067399789637,9.49618529379692,7.27312879702833,5.59175283654366,18.1524094147159,19.8974371472782,5.8755122697976,7.0690923458493,6.59893004092748,9.27612657633372,15.8778077769112,12.3525162761029,11.1832373380449,12.6891753740362,18.4115129277838,14.7529511637288,14.9261962022337,9.06370338267815,8.58408097209642,6.31806896084187,9.6803253707778,9.62891277924007,8.5063778640385,7.56260945182467,6.78171680260718,10.2735113718505,12.1708034270607,11.2442069471675,5.95017752699736,9.91612767491074,8.13156144721623,11.2608719464927,9.20622076195814,5.28289773528636,11.8405736617537,10.0833246839892,6.96619933864726,2.80885274925294,5.91900186363845,7.95657798307659,6.21377317606506,6.56672967947069,7.92273070428465,8.99629995223799,6.49321964766433,6.01641740260775,8.60375595576509,5.90201483079162,6.889155199663,5.26591519723137,7.05920095540109,6.4044359541226,9.35679919522127,8.12335426576887,8.85762363818454,14.2997165023607,13.8921226712034,8.26046957459495,7.1401652999157,9.17139477301506,9.0572302025571,6.44337306610467,9.07575860805041,9.11749979763968,13.6962450801043,10.9141684155238,9.88193728344065,11.8127548136127,13.7279965708394,9.94316844307513,9.88701349519644,8.42938394511308,7.96565093017469,6.82804443431094,8.79713547094912,11.270773567308,6.92414514674068,5.43066964069352,9.25792822552205,9.67519018001136,6.4948465111025,8.32093257559286,7.89741849099523,8.59712618552732,4.50481785433454,5.11053387294328,6.07127703439105,4.46292267054706,5.06472035480075,5.60176873919124,6.04161888646702,9.07957269940198,7.68771956926628,8.62609239164127,6.32639611036456,7.48890415474945,8.5876818502018,5.74071723270119,10.6137574699941,7.944387177164,7.39016505904891,9.4519686336375,8.48725428875941,8.44884893838608,8.20780661464897,8.33152743101048,9.75668239288994,10.5615546551148,7.0868700687608,10.2051051940792,8.02930242107116,10.3610989119537,10.5593812764503,42.2215595029962,29.3709069262103,11.8023425524569,9.3818493743609,13.6468001489623,17.2301179290539,5.08198330667694,7.32165688892682,8.51872192423893,7.41833614163613,7.75524231838076,10.2756583119597,10.2487390077901,7.07691326972081,8.09621403349789,7.3063964477828,10.2774822266096,15.4234231882467,6.95506417520516,9.25941139069727,10.2618784392753,7.25868541079156,9.2921596837974,8.25454162926937,6.65111825322452,5.28094223316515,11.5167738223501,7.07100840271033,7.75284879504663,7.27067458955011,7.84294232446387,4.42451461110142,8.4334886859999,6.18813259489121,9.87274856685985,8.64293251350289,9.70190128370659,8.57348140126369,9.04435191575595,12.664186049747,10.86023535974,13.3964577610424,10.560226862867,11.6507638975101,7.05690873775878,3.95727007059552,7.42736362801165,5.66941494324665,6.2073618881631,8.69946768648825,7.28702091574627,17.9862542950194,5.98048082792484,8.46186158649212,5.37064129372164,5.27431679613135,7.79157098009843,5.94823250336959,9.34881364966204,9.51669875800874,11.0559979043539,1.90934123603023,6.64305586520384,7.31950081656655,7.66837919834789,3.76358932826044,6.1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| |phase1_expression=7.68714466103011,9.77131141390211,6.3699893514535,3.32710632437513,3.50627010962443,6.37941233265181,7.47560449905682,6.97265946584512,2.111830832275,1.17032263160997,5.82141091966717,5.10541817570153,7.19043065711064,6.38168937658681,3.99731714178795,3.84703008040669,6.29605690315332,12.9339487796877,11.2433835556706,13.1560792057389,7.313722952992,13.9007331681239,11.7539905112521,8.31960598525715,7.79991555628378,5.16808767703518,5.59990595006797,4.95583835177545,6.65081968097309,5.29263272495855,6.65191531965914,10.1604907753541,9.84103660135312,0,1.44425809875637,2.99222361645286,2.45003227514843,20.5080499061085,4.6880120671428,22.5115209908733,22.3527965451785,15.0270006690858,20.3914348273085,10.4494358919729,11.4555932278051,11.3798986340243,22.6893489860931,11.9913836009246,11.643367684927,13.8045228342741,11.0589273084036,20.125359011096,17.9527388481778,7.25362142011344,9.07453257684653,10.5476368774738,11.1748041576115,9.7977697532714,19.8270131642406,14.2827564403449,15.8457850876545,16.6033820713875,13.3394219416671,55.343832612806,55.3765163037506,56.838409195688,32.6564120465061,24.5899715405795,11.509546966241,10.6654691282036,11.3575479129746,16.5677570954206,15.6816664075646,9.30930074033651,17.9231030804102,17.4651569455904,22.0231761998777,19.4084753889485,24.2698322544865,12.7929699098288,16.8337264228434,8.33461392890816,22.6138229191119,21.9477417912355,22.6141406709679,12.0797720044204,15.0913981647049,11.7431650869939,13.176357639974,13.5273092591146,7.24661221754194,8.60423876981386,7.47968467078526,11.873470216032,9.09686984426737,2.68816132258401,7.02222100658759,8.52151612890289,7.79358013808606,12.7202246823722,9.85903938436764,6.41632387071589,0,0,6.061749148314,8.61423542615335,3.53867111510348,5.36664234679582,8.54495016035667,8.31275978763019,9.88866362566974,8.52503339273995,13.3756988408514,10.7013074792362,11.4061045921634,11.3099932196708,15.5732829672656,4.916378135277,7.07688441559899,6.47067399789637,9.49618529379692,7.27312879702833,5.59175283654366,18.1524094147159,19.8974371472782,5.8755122697976,7.0690923458493,6.59893004092748,9.27612657633372,15.8778077769112,12.3525162761029,11.1832373380449,12.6891753740362,18.4115129277838,14.7529511637288,14.9261962022337,9.06370338267815,8.58408097209642,6.31806896084187,9.6803253707778,9.62891277924007,8.5063778640385,7.56260945182467,6.78171680260718,10.2735113718505,12.1708034270607,11.2442069471675,5.95017752699736,9.91612767491074,8.13156144721623,11.2608719464927,9.20622076195814,5.28289773528636,11.8405736617537,10.0833246839892,6.96619933864726,2.80885274925294,5.91900186363845,7.95657798307659,6.21377317606506,6.56672967947069,7.92273070428465,8.99629995223799,6.49321964766433,6.01641740260775,8.60375595576509,5.90201483079162,6.889155199663,5.26591519723137,7.05920095540109,6.4044359541226,9.35679919522127,8.12335426576887,8.85762363818454,14.2997165023607,13.8921226712034,8.26046957459495,7.1401652999157,9.17139477301506,9.0572302025571,6.44337306610467,9.07575860805041,9.11749979763968,13.6962450801043,10.9141684155238,9.88193728344065,11.8127548136127,13.7279965708394,9.94316844307513,9.88701349519644,8.42938394511308,7.96565093017469,6.82804443431094,8.79713547094912,11.270773567308,6.92414514674068,5.43066964069352,9.25792822552205,9.67519018001136,6.4948465111025,8.32093257559286,7.89741849099523,8.59712618552732,4.50481785433454,5.11053387294328,6.07127703439105,4.46292267054706,5.06472035480075,5.60176873919124,6.04161888646702,9.07957269940198,7.68771956926628,8.62609239164127,6.32639611036456,7.48890415474945,8.5876818502018,5.74071723270119,10.6137574699941,7.944387177164,7.39016505904891,9.4519686336375,8.48725428875941,8.44884893838608,8.20780661464897,8.33152743101048,9.75668239288994,10.5615546551148,7.0868700687608,10.2051051940792,8.02930242107116,10.3610989119537,10.5593812764503,42.2215595029962,29.3709069262103,11.8023425524569,9.3818493743609,13.6468001489623,17.2301179290539,5.08198330667694,7.32165688892682,8.51872192423893,7.41833614163613,7.75524231838076,10.2756583119597,10.2487390077901,7.07691326972081,8.09621403349789,7.3063964477828,10.2774822266096,15.4234231882467,6.95506417520516,9.25941139069727,10.2618784392753,7.25868541079156,9.2921596837974,8.25454162926937,6.65111825322452,5.28094223316515,11.5167738223501,7.07100840271033,7.75284879504663,7.27067458955011,7.84294232446387,4.42451461110142,8.4334886859999,6.18813259489121,9.87274856685985,8.64293251350289,9.70190128370659,8.57348140126369,9.04435191575595,12.664186049747,10.86023535974,13.3964577610424,10.560226862867,11.6507638975101,7.05690873775878,3.95727007059552,7.42736362801165,5.66941494324665,6.2073618881631,8.69946768648825,7.28702091574627,17.9862542950194,5.98048082792484,8.46186158649212,5.37064129372164,5.27431679613135,7.79157098009843,5.94823250336959,9.34881364966204,9.51669875800874,11.0559979043539,1.90934123603023,6.64305586520384,7.31950081656655,7.66837919834789,3.76358932826044,6.1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| ||
|short_description=p1@Vps18 | |short_description=p1@Vps18 | ||
}} | }} |
Latest revision as of 14:06, 25 September 2015
Short description: | p1@Vps18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Vps18_5end |
Coexpression cluster: | MCL_coexpression_mm9:247 |
Association with transcript: | 0bp_to_ENSMUST00000037280, ENSMUST00000139367, ENSMUST00000170824, ENSMUST00000171090, NM_172269, uc008ltn.2, uc008lto.2_5end |
EntrezGene: | Vps18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.08e-12 | 44 |
neurectodermal cell | 3.08e-12 | 44 |
neural cell | 3.61e-12 | 43 |
CNS neuron (sensu Vertebrata) | 2.09e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.09e-10 | 23 |
electrically responsive cell | 4.85e-09 | 39 |
electrically active cell | 4.85e-09 | 39 |
neuron | 5.92e-08 | 33 |
neuronal stem cell | 5.92e-08 | 33 |
neuroblast | 5.92e-08 | 33 |
electrically signaling cell | 5.92e-08 | 33 |