FFCP PHASE1:Mm9::chr11:69843632..69843643,+: Difference between revisions
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|id=chr11:69843632..69843643,+
|short_description=p28@Dlg4
|description=CAGE_peak_28_at_Dlg4_5end
|association_with_transcript=16bp_to_ENSMUST00000143920_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13385 | |EntrezGene=13385 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENSMUST00000143920_5end | |||
|cluster_id=chr11:69843632..69843643,+ | |||
|description=CAGE_peak_28_at_Dlg4_5end | |||
|id=chr11:69843632..69843643,+ | |||
|ontology_enrichment_celltype=CL:0002609!3.44e-17!6;CL:0000117!1.14e-14!23;CL:0000337!1.14e-14!23;CL:0000540!1.91e-09!33;CL:0000047!1.91e-09!33;CL:0000031!1.91e-09!33;CL:0000404!1.91e-09!33;CL:0002608!3.99e-09!3;CL:0002613!4.31e-08!3;CL:0000393!1.31e-07!39;CL:0000211!1.31e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,3.91e-58,6;CL:0000117,6.04e-16,23;CL:0000337,6.04e-16,23;CL:0000540,2.20e-11,33;CL:0000047,2.20e-11,33;CL:0000031,2.20e-11,33;CL:0000404,2.20e-11,33;CL:0000393,9.26e-10,39;CL:0000211,9.26e-10,39;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44;CL:0002608,1.34e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!1.42e-18!39;UBERON:0001890!1.42e-18!39;UBERON:0006240!1.42e-18!39;UBERON:0003080!5.27e-18!40;UBERON:0002616!1.13e-17!49;UBERON:0000955!3.16e-17!50;UBERON:0006238!3.16e-17!50;UBERON:0003056!8.94e-16!49;UBERON:0001049!1.13e-14!52;UBERON:0005068!1.13e-14!52;UBERON:0006241!1.13e-14!52;UBERON:0007135!1.13e-14!52;UBERON:0000033!2.69e-14!63;UBERON:0002791!5.40e-13!29;UBERON:0003528!5.40e-13!29;UBERON:0001893!5.40e-13!29;UBERON:0001017!9.77e-12!73;UBERON:0005743!9.77e-12!73;UBERON:0000073!2.69e-11!75;UBERON:0001016!2.69e-11!75;UBERON:0002346!7.21e-11!71;UBERON:0003075!7.21e-11!71;UBERON:0007284!7.21e-11!71;UBERON:0002020!1.15e-10!34;UBERON:0007811!3.37e-09!86;UBERON:0000007!1.98e-08!8;UBERON:0003296!1.98e-08!8;UBERON:0010133!1.98e-08!8;UBERON:0000369!4.46e-08!5;UBERON:0002435!4.46e-08!5;UBERON:0000204!4.46e-08!5;UBERON:0010082!4.46e-08!5;UBERON:0000153!5.12e-08!94;UBERON:0004121!5.26e-08!102;UBERON:0000924!5.26e-08!102;UBERON:0006601!5.26e-08!102;UBERON:0002420!1.63e-07!8;UBERON:0007245!1.63e-07!8;UBERON:0010009!1.63e-07!8;UBERON:0010011!1.63e-07!8;UBERON:0000454!1.63e-07!8;UBERON:0000956!2.04e-07!21;UBERON:0001869!2.04e-07!21;UBERON:0000203!2.04e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.25e-17,21;UBERON:0001869,2.25e-17,21;UBERON:0000203,2.25e-17,21;UBERON:0003528,7.80e-13,29;UBERON:0002791,7.80e-13,29;UBERON:0001893,7.80e-13,29;UBERON:0002020,4.50e-11,34;UBERON:0002780,9.26e-10,39;UBERON:0001890,9.26e-10,39;UBERON:0006240,9.26e-10,39;UBERON:0003080,1.55e-09,40;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0003056,6.29e-08,49;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0,1.55534418462716,1.75507719831198,2.52389953621658,0,0,0.244981598429908,0.383381884072945,1.83843757322004,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0.52091337055676,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0.2562274405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.532020700926821,0.178368817602071,0.493647061806363,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.499621155875892,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0,1.55534418462716,1.75507719831198,2.52389953621658,0,0,0.244981598429908,0.383381884072945,1.83843757322004,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0.52091337055676,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0.2562274405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.532020700926821,0.178368817602071,0.493647061806363,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.499621155875892,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p28@Dlg4 | |||
}} | }} |
Latest revision as of 14:11, 25 September 2015
Short description: | p28@Dlg4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_28_at_Dlg4_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | 16bp_to_ENSMUST00000143920_5end |
EntrezGene: | Dlg4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 3.91e-58 | 6 |
CNS neuron (sensu Vertebrata) | 6.04e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.04e-16 | 23 |
neuron | 2.20e-11 | 33 |
neuronal stem cell | 2.20e-11 | 33 |
neuroblast | 2.20e-11 | 33 |
electrically signaling cell | 2.20e-11 | 33 |
electrically responsive cell | 9.26e-10 | 39 |
electrically active cell | 9.26e-10 | 39 |
neural cell | 6.31e-09 | 43 |
ectodermal cell | 9.66e-09 | 44 |
neurectodermal cell | 9.66e-09 | 44 |
hippocampal neuron | 1.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 2.25e-17 | 21 |
cerebral hemisphere | 2.25e-17 | 21 |
pallium | 2.25e-17 | 21 |
brain grey matter | 7.80e-13 | 29 |
regional part of telencephalon | 7.80e-13 | 29 |
telencephalon | 7.80e-13 | 29 |
gray matter | 4.50e-11 | 34 |
regional part of forebrain | 9.26e-10 | 39 |
forebrain | 9.26e-10 | 39 |
future forebrain | 9.26e-10 | 39 |
anterior neural tube | 1.55e-09 | 40 |
regional part of brain | 2.15e-08 | 46 |
brain | 3.12e-08 | 47 |
future brain | 3.12e-08 | 47 |
pre-chordal neural plate | 6.29e-08 | 49 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |
regional part of nervous system | 2.91e-07 | 54 |