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FFCP PHASE1:Mm9::chr7:106684022..106684101,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:106684022..106684101,+
|DHSsupport=NA
|short_description=p4@Arrb1
|DPIdataset=NA
|description=CAGE_peak_4_at_Arrb1_5end
|association_with_transcript=26bp_to_NM_177231,NM_178220,uc009ilu.1,uc009ilv.1_5end
|EntrezGene=109689
|EntrezGene=109689
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8BWG8
|UniProt=Q8BWG8
|association_with_transcript=26bp_to_NM_177231,NM_178220,uc009ilu.1,uc009ilv.1_5end
|cluster_id=chr7:106684022..106684101,+
|description=CAGE_peak_4_at_Arrb1_5end
|id=chr7:106684022..106684101,+
|ontology_enrichment_celltype=CL:0000117!6.08e-13!23;CL:0000337!6.08e-13!23;CL:0000540!1.59e-08!33;CL:0000047!1.59e-08!33;CL:0000031!1.59e-08!33;CL:0000404!1.59e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,5.96e-13,23;CL:0000337,5.96e-13,23;CL:0000540,1.57e-08,33;CL:0000047,1.57e-08,33;CL:0000031,1.57e-08,33;CL:0000404,1.57e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.83e-18,54;UBERON:0002346,6.16e-17,64;UBERON:0003075,6.16e-17,64;UBERON:0007284,6.16e-17,64;UBERON:0002020,7.47e-17,34;UBERON:0001049,1.24e-16,52;UBERON:0005068,1.24e-16,52;UBERON:0006241,1.24e-16,52;UBERON:0007135,1.24e-16,52;UBERON:0001017,1.18e-14,73;UBERON:0003528,5.63e-14,29;UBERON:0002791,5.63e-14,29;UBERON:0001893,5.63e-14,29;UBERON:0000955,7.06e-14,47;UBERON:0006238,7.06e-14,47;UBERON:0010371,1.58e-13,73;UBERON:0002616,2.37e-13,46;UBERON:0001016,2.45e-13,75;UBERON:0003056,2.90e-13,49;UBERON:0003080,2.53e-12,40;UBERON:0004121,2.77e-12,95;UBERON:0000924,2.77e-12,95;UBERON:0006601,2.77e-12,95;UBERON:0002780,9.83e-12,39;UBERON:0001890,9.83e-12,39;UBERON:0006240,9.83e-12,39;UBERON:0000956,8.75e-10,21;UBERON:0001869,8.75e-10,21;UBERON:0000203,8.75e-10,21;UBERON:0002021,5.60e-08,10;UBERON:0000411,5.60e-08,10;UBERON:0001950,5.60e-08,10;UBERON:0002619,6.03e-08,17;UBERON:0010314,2.98e-07,92
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07881605257,2.39226473670366,2.64733584731356,3.11121901350476,4.1331143512874,4.89972763923257,5.98521917093345,2.8644964665669,3.56521771047417,0.966336483304024,0.864090018773596,1.26404448251271,1.82452693761148,0.821687657318618,1.03936658382236,1.79026695667481,1.39076948346885,1.20195449519969,1.47689527174577,1.61546319917036,2.362411006305,1.31074040677893,1.75424185331554,1.25075394132428,2.22066114144981,1.13365191807606,0.887943813496259,0.538283139656854,1.84673078000486,3.86379188064381,3.75364950902364,3.47988086107804,1.07184189539533,14.0440189129902,42.9211400388971,41.8895965221531,29.2176711854092,42.2758828565471,42.4751162257798,41.5466643564335,49.9516650171536,41.8798718998525,41.6891016265468,49.7049899281747,3.73634451303036,8.77854721482268,7.5122786531819,5.83456120963906,6.07878171621149,9.00833191405069,5.11167473943715,4.12070114477788,7.06022261101994,4.54854981174835,7.35089969681695,6.79054828989874,4.21386783614471,5.57018825922363,5.11175673704958,8.09699275181225,6.14186927507734,6.17309505483856,4.12085900803307,6.32955356577908,4.80016953339582,4.96932257246145,6.19934093863034,5.52316383202848,4.79957840118186,4.90764725771724,4.20734337607377,4.20911538300549,7.33342214767654,11.2228454331548,5.93175090620871,5.81176446015824,4.09231043169689,5.57772628269478,4.05103883060397,13.2399606307111,6.31615342802603,6.01638951335235,4.59091996965224,3.08827986767322,1.85494268496337
|phase1_expression=2.08193501236232,2.44282785347553,2.27499619694768,9.98131897312539,18.5331420080148,1.00727563147134,3.03696432774183,2.84071311571468,1.267098499365,1.17032263160997,0,0,3.42401459862411,2.62261207256992,3.33109761815663,4.25198061518635,1.39912375625629,2.36596624018678,4.2505474417779,1.69755860719212,8.41928572495591,1.68794617041505,2.08959831311148,1.59992422793407,1.37645568640302,0.57423196411502,1.7230479846363,1.50829862880122,3.23039813075836,3.52842181663903,0.443461021310609,8.89042942843484,8.61090702618398,0,1.73310971850765,1.49611180822643,2.45003227514843,5.4409111995798,7.0320181007142,5.23523743973798,8.2352408324342,15.7100461540443,13.1087795318411,1.6366586336825,0.912392380975631,0.734187008646726,4.69434806608824,0.872100625521786,1.75748946187577,1.36100929351998,0.699932108126813,1.43752564364972,1.67782606057736,2.17608642603403,3.02484419228218,2.05807548828758,1.14613375975503,2.57836046138721,29.5382032855013,29.0945038599618,34.2268957893337,1.0165335962074,0,7.64914759689189,4.94433181283487,6.3943210345149,2.69640099466564,1.15265491596466,9.22837549545451,12.5555522648472,9.67494822216357,27.7081454871689,28.2711732418065,9.30930074033651,10.2554653989513,22.0612508786405,37.4393995397922,25.2820929408672,30.26048705148,28.0917792865313,21.9570344645783,18.2319679694866,20.9387249251036,26.449842671489,25.6701056265041,34.4715445004191,27.4777343942269,22.1815340532108,0.681535739998656,1.73814588245607,4.92769630792852,2.58127163094416,0.679971333707751,0,0.649776417447669,0,2.66844398250329,0.852151612890289,1.03914401841148,2.12003744706204,2.81686839553361,1.28326477414318,10.1922095882658,7.11066703153331,0.649473123033642,0,0.505524445014783,2.62622923353838,3.36619248741323,5.04703272820404,2.4287945747259,2.74018930480927,3.92046345335299,2.71300752994721,4.9387256996996,1.88499886994513,3.70792451601561,2.31358971071859,7.07688441559899,2.42650274921114,3.09178125844551,0,3.72783522436244,19.3235326027621,15.0801628905688,5.62005521458901,2.87556298814209,1.19980546198682,1.52484272487678,40.5932632787069,42.5475560621323,22.3664746760899,53.8855392596057,48.0745059781021,29.298114282898,27.418773458451,2.95334155165917,2.61254638281195,1.26361379216837,5.6819301089348,2.21204753036596,2.98872735763515,4.68161537493908,5.57607825992146,8.09634339900802,9.22418786050918,9.55757590509234,5.95017752699736,2.80238390812695,3.9712276835242,4.04687585577082,4.3839146485515,4.44875598760957,3.48252166522167,2.67516777330327,1.79130840136644,2.80885274925294,2.83082697826187,2.55747149456033,2.48550927042602,0.938104239924385,1.98068267607116,2.60419209143731,0.983821158737019,1.3884040159864,1.62773761325285,1.87791380979733,1.63471479314037,1.6455984991348,1.31333971263276,1.86458261955468,2.92399974850665,3.29325172936576,1.47627060636409,29.6508827475419,24.4912977462697,6.93879444265976,5.28901133327089,5.33220626338085,3.48355007790658,3.22168653305233,1.81515172161008,1.77902435075896,2.28270751335071,2.84717436926707,3.95277491337626,3.2673577144035,2.98434708061726,2.53453313254856,2.69645822596266,4.53889904736858,5.97423819763102,2.46568271239006,2.97046132785295,4.50830942692322,3.25842124552503,2.71533482034676,3.08597607517402,3.22506339333712,4.72352473534727,3.92496819603437,3.82531208157582,0.296452627087149,2.33583148002532,3.93117990226406,2.69834534861824,4.86864291332407,1.68824011826692,2.03700681425136,2.01387296215567,1.94562272130042,1.92192989231657,0,2.60498663367952,0.624075346229121,1.26289438973556,0.538192240565737,0,6.65111484599777,3.22135400009824,3.42226450528254,3.56464680127895,2.58159273117352,5.19269398069629,4.28478553594825,5.26860849216057,7.88175720530955,7.75126413770712,7.81328366421687,7.04612253277673,6.38934432903814,7.37710198765709,0,5.4390568381871,1.96705709207614,4.13905119457099,29.0596567877903,26.9586879162067,0.327869890753351,2.01976741763498,3.47059041357882,1.95219372148319,4.30846795465598,2.15071918157297,2.67358408898873,4.24614796183249,2.42886421004937,3.50707029493574,2.37172666767914,27.3123118958536,5.39372323791421,3.02711526234334,3.25773918707152,4.28922319728592,5.30980553359851,0.971122544619926,1.209294227859,1.13163047853539,1.18120757152309,1.84461088766356,2.84271122485043,1.81766864738753,1.78248689192361,1.58018378967908,3.16255825724996,3.09406629744561,1.70219802876894,1.44048875225048,3.10460841078611,3.00071849044229,1.95074257006501,3.38900753443934,5.59466670047211,4.56697423671899,3.05073220482823,8.26145076368899,7.49796553386871,4.45192882941996,2.58343082713449,1.32688434841943,2.02932984805332,1.47726809770555,4.37221254944776,24.1052892613663,4.10090113914846,4.54051109519089,4.62986318424279,5.65105371014073,3.8274383761887,3.66045077130436,3.73952545986482,3.21888340344413,4.28419918793714,0,4.4287039101359,2.43983360552218,3.34816556547584,1.46361807210128,3.05707589244649,3.37160865962052,4.3806331534428,2.6175594198403,4.14767914533737,11.1841076355647,1.69107881605257,2.39226473670366,2.64733584731356,3.11121901350476,4.1331143512874,4.89972763923257,5.98521917093345,2.8644964665669,3.56521771047417,0.966336483304024,0.864090018773596,1.26404448251271,1.82452693761148,0.821687657318618,1.03936658382236,1.79026695667481,1.39076948346885,1.20195449519969,1.47689527174577,1.61546319917036,2.362411006305,1.31074040677893,1.75424185331554,1.25075394132428,2.22066114144981,1.13365191807606,0.887943813496259,0.538283139656854,1.84673078000486,3.86379188064381,3.75364950902364,3.47988086107804,1.07184189539533,14.0440189129902,42.9211400388971,41.8895965221531,29.2176711854092,42.2758828565471,42.4751162257798,41.5466643564335,49.9516650171536,41.8798718998525,41.6891016265468,49.7049899281747,3.73634451303036,8.77854721482268,7.5122786531819,5.83456120963906,6.07878171621149,9.00833191405069,5.11167473943715,4.12070114477788,7.06022261101994,4.54854981174835,7.35089969681695,6.79054828989874,4.21386783614471,5.57018825922363,5.11175673704958,8.09699275181225,6.14186927507734,6.17309505483856,4.12085900803307,6.32955356577908,4.80016953339582,4.96932257246145,6.19934093863034,5.52316383202848,4.79957840118186,4.90764725771724,4.20734337607377,4.20911538300549,7.33342214767654,11.2228454331548,5.93175090620871,5.81176446015824,4.09231043169689,5.57772628269478,4.05103883060397,13.2399606307111,6.31615342802603,6.01638951335235,4.59091996965224,3.08827986767322,1.85494268496337
|short_description=p4@Arrb1
}}
}}

Latest revision as of 14:17, 25 September 2015

Short description:p4@Arrb1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Arrb1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 26bp_to_NM_177231, NM_178220, uc009ilu.1, uc009ilv.1_5end
EntrezGene:Arrb1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Arrb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.98
CD326+ enterocyte, pool2.CNhs13197.11849-124I418.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.62
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.37
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.25
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B93.23
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H215.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H413.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C329.54
Mouse Granule cells, donor2.CNhs12357.11731-123E329.09
Mouse Granule cells, donor3.CNhs12108.11636-122C734.23
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.23
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.56
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.67
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F127.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D528.27
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.06
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D337.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F325.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D730.26
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D428.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.96
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.23
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E420.94
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E526.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I625.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D634.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F627.48
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E122.18
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F91.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D75.05
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C14.94
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A83.71
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A63.09
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B219.32
cerebellum, neonate N30.CNhs11135.1395-42I215.08
colon, adult.CNhs10468.36-18H75.62
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.88
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.52
corpora quadrigemina, adult.CNhs10501.16-22A440.59
corpus striatum, adult.CNhs10487.19-21D842.55
corpus striatum, neonate N00.CNhs11226.630-43F122.37
cortex, adult.CNhs10473.12-14D553.89
cortex, neonate N30.CNhs11107.1392-42F248.07
diencephalon, adult.CNhs10482.20-12F229.30
diencephalon, neonate N30.CNhs11201.1388-42B227.42
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.61
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G45.68
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C94.68
eyeball, embryo E17.CNhs11023.1261-18D45.58
eyeball, neonate N00.CNhs11207.633-15C68.10
eyeball, neonate N01.CNhs11140.1532-43E79.22
eyeball, neonate N02.CNhs11205.1551-44G89.56
eyeball, neonate N16.CNhs11188.777-19A25.95
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H23.97
forelimb, embryo E13.CNhs10589.384-1E24.05
forelimb, embryo E14.CNhs10577.413-26A84.38
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G11.86
heart, neonate N20.CNhs11127.821-26I62.92
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E829.65
hippocampus, neonate N00.CNhs11228.627-43G124.49
intestinal mucosa, adult.CNhs10506.860-29I36.94
intestine, adult.CNhs10496.178-9A35.29
intestine, embryo E12.CNhs11019.1251-16I55.33
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D83.22
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E93.95
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G15.97
kidney, embryo E14.CNhs10606.411-4I92.47
kidney, embryo E15.CNhs10997.434-16F82.97
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G73.09
kidney, neonate N10.CNhs11206.758-6D53.23
kidney, neonate N20.CNhs11113.832-19I14.72
kidney, neonate N25.CNhs11122.1353-25F33.92
kidney, neonate N30.CNhs11203.1385-42H13.83
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H63.93
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D74.87
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B16.65
lung, embryo E12.CNhs10522.354-16G23.22
lung, embryo E14.CNhs10604.404-26F83.42
lung, embryo E15.CNhs11020.432-17C53.56
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A65.19
lung, embryo E18.CNhs10583.1287-20I64.28
lung, neonate N00.CNhs11224.640-42C65.27
lung, neonate N06.CNhs11212.683-20E57.88
lung, neonate N07.CNhs11111.715-19A37.75
lung, neonate N10.CNhs11219.750-23E67.81
lung, neonate N20.CNhs11109.822-18A47.05
lung, neonate N25.CNhs11119.1359-25C76.39
lung, neonate N30.CNhs11133.1394-42H27.38
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.44
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C229.06
medulla oblongata, neonate N30.CNhs11200.1396-42A326.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.31
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I927.31
ovary, adult.CNhs10507.91-2I75.39
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I43.26
oviduct, adult pregnant day01.CNhs10500.988-6G64.29
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C73.10
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F55.59
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I73.05
placenta, adult pregnant day17.CNhs10464.577-18G38.26
prostate, adult.CNhs10470.859-1F87.50
skin, adult.CNhs10492.30-1C34.45
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H31.33
skin, neonate N06.CNhs11097.693-20I52.03
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C924.11
spleen, adult.CNhs10465.25-2G24.10
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F24.63
spleen, neonate N10.CNhs11116.752-24D15.65
spleen, neonate N20.CNhs11112.824-19H13.83
spleen, neonate N25.CNhs11099.1354-25G33.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E34.43
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D43.35
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B83.37
stomach, neonate N07.CNhs11210.718-18A94.38
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I14.15
submandibular gland, adult.CNhs10469.59-29C111.18
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F52.39
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I54.13
testis, embryo E18.CNhs11027.503-18G54.90
testis, neonate N00.CNhs11189.1300-22B75.99
testis, neonate N07.CNhs11222.726-26I42.86
testis, neonate N10.CNhs11204.763-44D93.57
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C41.62
thymus, neonate N07.CNhs11211.713-19D32.36
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G22.22
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F814.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A142.92
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A241.89
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A329.22
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D742.28
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A442.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A541.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A649.95
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A741.88
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A841.69
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A949.70
whole body, embryo E11.CNhs11014.324-5I83.74
whole body, embryo E12.CNhs10587.857-27C98.78
whole body, embryo E13.CNhs10512.372-23H27.51
whole body, embryo E14.5.CNhs10578.420-27D25.83
whole body, embryo E14.CNhs10519.395-14B16.08
whole body, embryo E16.CNhs10514.453-14F29.01
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.35
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.93
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.58
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I513.24
whole body, embryo E18.CNhs10516.493-3B36.32
whole body, neonate N00.CNhs10525.657-19C26.02
whole body, neonate N01.CNhs10576.659-23C64.59
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.96e-1323
neuroblast (sensu Vertebrata)5.96e-1323
neuron1.57e-0833
neuronal stem cell1.57e-0833
neuroblast1.57e-0833
electrically signaling cell1.57e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.83e-1854
neurectoderm6.16e-1764
neural plate6.16e-1764
presumptive neural plate6.16e-1764
gray matter7.47e-1734
neural tube1.24e-1652
neural rod1.24e-1652
future spinal cord1.24e-1652
neural keel1.24e-1652
central nervous system1.18e-1473
brain grey matter5.63e-1429
regional part of telencephalon5.63e-1429
telencephalon5.63e-1429
brain7.06e-1447
future brain7.06e-1447
ecto-epithelium1.58e-1373
regional part of brain2.37e-1346
nervous system2.45e-1375
pre-chordal neural plate2.90e-1349
anterior neural tube2.53e-1240
ectoderm-derived structure2.77e-1295
ectoderm2.77e-1295
presumptive ectoderm2.77e-1295
regional part of forebrain9.83e-1239
forebrain9.83e-1239
future forebrain9.83e-1239
cerebral cortex8.75e-1021
cerebral hemisphere8.75e-1021
pallium8.75e-1021
occipital lobe5.60e-0810
visual cortex5.60e-0810
neocortex5.60e-0810
regional part of cerebral cortex6.03e-0817
structure with developmental contribution from neural crest2.98e-0792
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