Personal tools

FFCP PHASE1:Mm9::chr10:115455408..115455477,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr10:115455408..115455477,+
|DHSsupport=NA
|short_description=p1@Ptprr
|DPIdataset=NA
|description=CAGE_peak_1_at_Ptprr_5end
|association_with_transcript=0bp_to_NM_011217,uc007hbp.2_5end
|EntrezGene=19279
|EntrezGene=19279
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q5U1U6,Q62132,Q8CEI8
|UniProt=Q5U1U6,Q62132,Q8CEI8
|association_with_transcript=0bp_to_NM_011217,uc007hbp.2_5end
|cluster_id=chr10:115455408..115455477,+
|description=CAGE_peak_1_at_Ptprr_5end
|id=chr10:115455408..115455477,+
|ontology_enrichment_celltype=CL:0000540!4.94e-14!33;CL:0000047!4.94e-14!33;CL:0000031!4.94e-14!33;CL:0000404!4.94e-14!33;CL:0000117!3.04e-11!23;CL:0000337!3.04e-11!23;CL:0002319!6.36e-10!43;CL:0000221!7.99e-10!44;CL:0000133!7.99e-10!44;CL:0000393!8.76e-10!39;CL:0000211!8.76e-10!39
|ontology_enrichment_celltype_v019_2=CL:0000540,1.99e-14,33;CL:0000047,1.99e-14,33;CL:0000031,1.99e-14,33;CL:0000404,1.99e-14,33;CL:0000117,6.89e-12,23;CL:0000337,6.89e-12,23;CL:0000393,2.76e-10,39;CL:0000211,2.76e-10,39;CL:0002319,1.57e-09,43;CL:0000221,4.83e-09,44;CL:0000133,4.83e-09,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.48e-27!73;UBERON:0005743!4.48e-27!73;UBERON:0000073!4.72e-27!75;UBERON:0001016!4.72e-27!75;UBERON:0002346!9.59e-26!71;UBERON:0003075!9.59e-26!71;UBERON:0007284!9.59e-26!71;UBERON:0004121!1.35e-25!102;UBERON:0000924!1.35e-25!102;UBERON:0006601!1.35e-25!102;UBERON:0001049!8.91e-21!52;UBERON:0005068!8.91e-21!52;UBERON:0006241!8.91e-21!52;UBERON:0007135!8.91e-21!52;UBERON:0000955!2.21e-19!50;UBERON:0006238!2.21e-19!50;UBERON:0000033!8.77e-19!63;UBERON:0002616!1.03e-18!49;UBERON:0003056!5.30e-17!49;UBERON:0002020!1.56e-16!34;UBERON:0003080!6.58e-16!40;UBERON:0002780!3.08e-15!39;UBERON:0001890!3.08e-15!39;UBERON:0006240!3.08e-15!39;UBERON:0002791!2.88e-13!29;UBERON:0003528!2.88e-13!29;UBERON:0001893!2.88e-13!29;UBERON:0000956!4.94e-09!21;UBERON:0001869!4.94e-09!21;UBERON:0000203!4.94e-09!21;UBERON:0002619!1.34e-08!17;UBERON:0002021!1.46e-08!10;UBERON:0000411!1.46e-08!10;UBERON:0001950!1.46e-08!10;UBERON:0007811!1.16e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.21e-28,73;UBERON:0001016,8.78e-28,75;UBERON:0002346,4.15e-25,64;UBERON:0003075,4.15e-25,64;UBERON:0007284,4.15e-25,64;UBERON:0000073,1.08e-23,54;UBERON:0004121,9.78e-23,95;UBERON:0000924,9.78e-23,95;UBERON:0006601,9.78e-23,95;UBERON:0001049,3.51e-22,52;UBERON:0005068,3.51e-22,52;UBERON:0006241,3.51e-22,52;UBERON:0007135,3.51e-22,52;UBERON:0010371,5.27e-19,73;UBERON:0000955,1.78e-18,47;UBERON:0006238,1.78e-18,47;UBERON:0002616,9.49e-18,46;UBERON:0003056,1.17e-17,49;UBERON:0002020,1.34e-17,34;UBERON:0003080,2.47e-16,40;UBERON:0002780,1.37e-15,39;UBERON:0001890,1.37e-15,39;UBERON:0006240,1.37e-15,39;UBERON:0010314,1.61e-15,92;UBERON:0003528,6.35e-14,29;UBERON:0002791,6.35e-14,29;UBERON:0001893,6.35e-14,29;UBERON:0002021,1.50e-09,10;UBERON:0000411,1.50e-09,10;UBERON:0001950,1.50e-09,10;UBERON:0002619,2.63e-09,17;UBERON:0000956,3.62e-09,21;UBERON:0001869,3.62e-09,21;UBERON:0000203,3.62e-09,21
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0.194429899074283,0,2.87505128729943,0,0,0.336093799142464,0,0,0,15.9830004079082,23.2756030879694,13.9442908771359,0,0,0,0,0,0.599200221036809,0,2.28117147078651,0.810035629990144,2.10324961351382,27.4224945027651,29.154647405613,5.87955836231779,2.30029130443767,6.43453150627015,47.3498288297371,18.7700386985226,19.6616362567992,11.0784481693363,12.7167824607349,11.4600941522487,16.7509799400829,15.1945904708554,18.7941844765476,42.4265163082082,36.5895219653695,27.2143190904939,0.454357159999104,2.56943304363071,0,0,0.679971333707751,0,0,0,1.26399978118577,0,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0.79928715803342,0,4.60170631100957,4.16364784238726,7.91610243611567,3.45923245884088,7.53613202763113,8.93674174231356,1.88499886994513,0,0,0,0.161766849947409,0.220841518460394,0,3.72783522436244,77.2941304110484,57.1789509600732,2.81002760729451,0,0,0,37.148078572396,32.9400434029411,20.7329680986226,38.2413504423008,30.4301394223093,23.6878370797899,29.0411860891286,0.203678727700633,0,0,4.20883711772948,1.04096354370163,1.83921683546778,1.0803727788321,2.86339153887859,2.31324097114515,3.07472928683639,3.18585863503078,17.8505325809921,0.215567992932842,0.378212160335639,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,34.2772616159527,20.6838270882362,0.660837565967596,2.3800550999719,0.853153002140936,1.85789337488351,1.9330119198314,2.62188582010345,2.2237804384487,3.61428689613862,1.89811624617805,3.95277491337626,4.02136334080431,4.77495532898762,3.11942539390592,3.59527763461689,2.37751854862164,4.77939055810481,0.189667900953082,1.25673363870702,0,0,0.193952487167626,0.350679099451593,0,0,0,0,0,0,0.196558995113203,0,0.405720242777006,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.947457058852424,0,0,0,0.167506257441816,0.476087281772027,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,23.922037908181,19.6915633474901,0,0,3.78609863299508,7.02789739733949,13.3562506594335,1.67278158566786,3.34198011123591,6.22768367735431,8.09621403349789,13.4437694639203,13.0444966722353,31.8108103257589,0,1.06839362200353,2.28041743095006,0.164970122972535,2.65490276679926,0,0,0.188605079755898,0.590603785761546,0.922305443831782,2.84271122485043,1.45413491791002,1.06949213515416,1.26414703174326,1.05418608574999,1.03135543248187,4.76615448055303,1.26042765821917,0.776152102696527,1.92903331528433,2.12808280370728,3.74574516964348,5.26556865926787,4.87143918583359,0.23467170806371,0.21183207086382,2.42581237860458,0,0.484393280087717,0.120625849856312,0,0.492422699235184,4.66369338607761,21.5093350332191,0,0.206386867963223,0,0,0,0,0,0,0,4.77335309007557,0.316335993581135,1.82987520414164,0.648032044930808,1.88179466413022,1.74690050996942,1.34864346384821,1.98368293740806,3.66458318777641,2.59229946583586,0,0,0,0.330916980914195,0.194451188344048,0.387479470433193,0.506868376472335,0.352071715937262,0,0.314578033277133,0,0,0,0,0.205421914329655,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,2.70465431645067,0,0,0,0,59.8636953174091,54.3183779078469,63.0185064783336,43.994414679984,37.6795385873853,46.8344216381614,39.8263275136765,38.2773022740587,33.0793958558469,43.4918661871529,1.03787347584177,3.19219898720825,5.80494259564056,3.8897074730927,5.03071590307158,2.38996560985018,4.88942801163553,7.0051919461224,7.38114182061175,7.07552192938633,6.84394109703647,5.09291121742406,4.68207537349412,4.92993673517493,6.08815970929501,4.76293691283074,6.14186927507734,4.82273051159263,4.12085900803307,6.47675248591348,7.54312355247914,7.80893547101085,3.57654284920981,6.24989591519013,6.30532848782715,6.43071019976741,4.75612729469209,4.73525480588117,5.29636043998861,7.2948495315506,6.4062909787054,5.91026894253381,5.72923460437565,5.26785260032284,5.5942917184531,9.74261253957989,4.44470056046276,5.58664740525576,4.59091996965224,1.54413993383661,1.85494268496337
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0.194429899074283,0,2.87505128729943,0,0,0.336093799142464,0,0,0,15.9830004079082,23.2756030879694,13.9442908771359,0,0,0,0,0,0.599200221036809,0,2.28117147078651,0.810035629990144,2.10324961351382,27.4224945027651,29.154647405613,5.87955836231779,2.30029130443767,6.43453150627015,47.3498288297371,18.7700386985226,19.6616362567992,11.0784481693363,12.7167824607349,11.4600941522487,16.7509799400829,15.1945904708554,18.7941844765476,42.4265163082082,36.5895219653695,27.2143190904939,0.454357159999104,2.56943304363071,0,0,0.679971333707751,0,0,0,1.26399978118577,0,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0.79928715803342,0,4.60170631100957,4.16364784238726,7.91610243611567,3.45923245884088,7.53613202763113,8.93674174231356,1.88499886994513,0,0,0,0.161766849947409,0.220841518460394,0,3.72783522436244,77.2941304110484,57.1789509600732,2.81002760729451,0,0,0,37.148078572396,32.9400434029411,20.7329680986226,38.2413504423008,30.4301394223093,23.6878370797899,29.0411860891286,0.203678727700633,0,0,4.20883711772948,1.04096354370163,1.83921683546778,1.0803727788321,2.86339153887859,2.31324097114515,3.07472928683639,3.18585863503078,17.8505325809921,0.215567992932842,0.378212160335639,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,34.2772616159527,20.6838270882362,0.660837565967596,2.3800550999719,0.853153002140936,1.85789337488351,1.9330119198314,2.62188582010345,2.2237804384487,3.61428689613862,1.89811624617805,3.95277491337626,4.02136334080431,4.77495532898762,3.11942539390592,3.59527763461689,2.37751854862164,4.77939055810481,0.189667900953082,1.25673363870702,0,0,0.193952487167626,0.350679099451593,0,0,0,0,0,0,0.196558995113203,0,0.405720242777006,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.947457058852424,0,0,0,0.167506257441816,0.476087281772027,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,23.922037908181,19.6915633474901,0,0,3.78609863299508,7.02789739733949,13.3562506594335,1.67278158566786,3.34198011123591,6.22768367735431,8.09621403349789,13.4437694639203,13.0444966722353,31.8108103257589,0,1.06839362200353,2.28041743095006,0.164970122972535,2.65490276679926,0,0,0.188605079755898,0.590603785761546,0.922305443831782,2.84271122485043,1.45413491791002,1.06949213515416,1.26414703174326,1.05418608574999,1.03135543248187,4.76615448055303,1.26042765821917,0.776152102696527,1.92903331528433,2.12808280370728,3.74574516964348,5.26556865926787,4.87143918583359,0.23467170806371,0.21183207086382,2.42581237860458,0,0.484393280087717,0.120625849856312,0,0.492422699235184,4.66369338607761,21.5093350332191,0,0.206386867963223,0,0,0,0,0,0,0,4.77335309007557,0.316335993581135,1.82987520414164,0.648032044930808,1.88179466413022,1.74690050996942,1.34864346384821,1.98368293740806,3.66458318777641,2.59229946583586,0,0,0,0.330916980914195,0.194451188344048,0.387479470433193,0.506868376472335,0.352071715937262,0,0.314578033277133,0,0,0,0,0.205421914329655,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,2.70465431645067,0,0,0,0,59.8636953174091,54.3183779078469,63.0185064783336,43.994414679984,37.6795385873853,46.8344216381614,39.8263275136765,38.2773022740587,33.0793958558469,43.4918661871529,1.03787347584177,3.19219898720825,5.80494259564056,3.8897074730927,5.03071590307158,2.38996560985018,4.88942801163553,7.0051919461224,7.38114182061175,7.07552192938633,6.84394109703647,5.09291121742406,4.68207537349412,4.92993673517493,6.08815970929501,4.76293691283074,6.14186927507734,4.82273051159263,4.12085900803307,6.47675248591348,7.54312355247914,7.80893547101085,3.57654284920981,6.24989591519013,6.30532848782715,6.43071019976741,4.75612729469209,4.73525480588117,5.29636043998861,7.2948495315506,6.4062909787054,5.91026894253381,5.72923460437565,5.26785260032284,5.5942917184531,9.74261253957989,4.44470056046276,5.58664740525576,4.59091996965224,1.54413993383661,1.85494268496337
|short_description=p1@Ptprr
}}
}}

Latest revision as of 15:04, 25 September 2015

Short description:p1@Ptprr
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ptprr_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_NM_011217, uc007hbp.2_5end
EntrezGene:Ptprr
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ptprr

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C315.98
Mouse Granule cells, donor2.CNhs12357.11731-123E323.28
Mouse Granule cells, donor3.CNhs12108.11636-122C713.94
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F127.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D529.15
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D347.35
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.66
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.08
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.72
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.79
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D642.43
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F636.59
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E127.21
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F92.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D74.60
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D67.92
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F57.54
adrenal gland, neonate N00.CNhs11191.1311-23C18.94
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B277.29
cerebellum, neonate N30.CNhs11135.1395-42I257.18
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A437.15
corpus striatum, adult.CNhs10487.19-21D832.94
corpus striatum, neonate N00.CNhs11226.630-43F120.73
cortex, adult.CNhs10473.12-14D538.24
cortex, neonate N30.CNhs11107.1392-42F230.43
diencephalon, adult.CNhs10482.20-12F223.69
diencephalon, neonate N30.CNhs11201.1388-42B229.04
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E73.07
eyeball, neonate N02.CNhs11205.1551-44G83.19
eyeball, neonate N16.CNhs11188.777-19A217.85
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E834.28
hippocampus, neonate N00.CNhs11228.627-43G120.68
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F73.61
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E93.95
intestine, neonate N06.CNhs11102.688-20B84.02
intestine, neonate N07.CNhs11095.720-20F24.77
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G14.78
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C223.92
medulla oblongata, neonate N30.CNhs11200.1396-42A319.69
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.03
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E313.36
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.23
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.44
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.04
olfactory brain, adult.CNhs10489.18-22I931.81
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F55.27
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C921.51
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.98
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I12.59
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A159.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A254.32
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A363.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D743.99
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A437.68
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A546.83
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A639.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A738.28
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A833.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A943.49
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H25.80
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.08
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.48
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.81
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.31
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.43
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.91
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.27
whole body, embryo E17.5.CNhs10513.490-9F95.59
whole body, embryo E17.CNhs10517.475-3I59.74
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C64.59
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.99e-1433
neuronal stem cell1.99e-1433
neuroblast1.99e-1433
electrically signaling cell1.99e-1433
CNS neuron (sensu Vertebrata)6.89e-1223
neuroblast (sensu Vertebrata)6.89e-1223
electrically responsive cell2.76e-1039
electrically active cell2.76e-1039
neural cell1.57e-0943
ectodermal cell4.83e-0944
neurectodermal cell4.83e-0944

Uber anatomy
Ontology termp-valuen
central nervous system2.21e-2873
nervous system8.78e-2875
neurectoderm4.15e-2564
neural plate4.15e-2564
presumptive neural plate4.15e-2564
regional part of nervous system1.08e-2354
ectoderm-derived structure9.78e-2395
ectoderm9.78e-2395
presumptive ectoderm9.78e-2395
neural tube3.51e-2252
neural rod3.51e-2252
future spinal cord3.51e-2252
neural keel3.51e-2252
ecto-epithelium5.27e-1973
brain1.78e-1847
future brain1.78e-1847
regional part of brain9.49e-1846
pre-chordal neural plate1.17e-1749
gray matter1.34e-1734
anterior neural tube2.47e-1640
regional part of forebrain1.37e-1539
forebrain1.37e-1539
future forebrain1.37e-1539
structure with developmental contribution from neural crest1.61e-1592
brain grey matter6.35e-1429
regional part of telencephalon6.35e-1429
telencephalon6.35e-1429
occipital lobe1.50e-0910
visual cortex1.50e-0910
neocortex1.50e-0910
regional part of cerebral cortex2.63e-0917
cerebral cortex3.62e-0921
cerebral hemisphere3.62e-0921
pallium3.62e-0921
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:115455408..115455477,%2B&oldid=4198254"