FFCP PHASE1:Mm9::chr10:117147144..117147155,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17246 | |EntrezGene=17246 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2520 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENSMUST00000137102_5end | |association_with_transcript=-10bp_to_ENSMUST00000137102_5end | ||
|cluster_id=chr10:117147144..117147155,- | |||
|description=CAGE_peak_8_at_Mdm2_5end | |description=CAGE_peak_8_at_Mdm2_5end | ||
|id=chr10:117147144..117147155,- | |id=chr10:117147144..117147155,- | ||
|ontology_enrichment_celltype=CL:0000144!7.59e-08!121;CL:0000012!7.59e-08!121;CL:0000355!1.70e-07!9;CL:0002371!3.38e-07!118 | |ontology_enrichment_celltype=CL:0000144!7.59e-08!121;CL:0000012!7.59e-08!121;CL:0000355!1.70e-07!9;CL:0002371!3.38e-07!118 | ||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.49e-16,9;CL:0000680,2.66e-10,6;CL:0000187,2.66e-10,6;CL:0000056,2.66e-10,6;CL:0000192,8.14e-09,3;CL:0000359,8.14e-09,3;CL:0002539,8.14e-09,3;CL:0000514,8.14e-09,3;CL:0000222,9.13e-09,7;CL:0002321,1.12e-08,70;CL:0000349,1.35e-08,3;CL:0000351,1.35e-08,3;CL:0000034,1.59e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.94e-08,3;DOID:4045,5.94e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001134!1.70e-07!9;UBERON:0002036!1.70e-07!9;UBERON:0002385!1.70e-07!9;UBERON:0000486!1.70e-07!9;UBERON:0001015!1.70e-07!9;UBERON:0004290!1.70e-07!9;UBERON:0003082!1.70e-07!9;UBERON:0005256!8.71e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.49e-16,9;UBERON:0002036,1.49e-16,9;UBERON:0002385,1.49e-16,9;UBERON:0000486,1.49e-16,9;UBERON:0007503,1.49e-16,9;UBERON:0001015,1.49e-16,9;UBERON:0002329,1.49e-16,9;UBERON:0003082,1.49e-16,9;UBERON:0003059,1.49e-16,9;UBERON:0007282,1.49e-16,9;UBERON:0004290,1.49e-16,9;UBERON:0009618,1.49e-16,9;UBERON:0000383,9.53e-15,10;UBERON:0007524,2.86e-13,11;UBERON:0003077,2.86e-13,11;UBERON:0007285,2.86e-13,11;UBERON:0000010,1.28e-09,11;UBERON:0001135,8.14e-09,3;UBERON:0004237,8.14e-09,3;UBERON:0004695,8.14e-09,3;UBERON:0002111,8.14e-09,3;UBERON:0004178,8.14e-09,3;UBERON:0000358,1.35e-08,3;UBERON:0000307,1.35e-08,3;UBERON:0007010,1.35e-08,3;UBERON:0005256,6.16e-07,45;UBERON:0002204,9.01e-07,32 | |||
|phase1_expression=0,0.697950815278722,0.454999239389536,1.20985684522732,0,0,0.233612640595526,0,0.281577444303333,0.234064526321993,0,0.159544317990673,0,0.174840804837995,0.333109761815663,0.607425802169478,1.39912375625629,0.157731082679119,0,0,0.0850432901510698,0.397163804803541,0.261199789138935,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0,0,2.92972141515835,2.3440060335714,2.09409497589519,2.35292595212406,1.36609096991689,2.91306211818692,4.78407908307194,4.56196190487815,4.9557623083654,0,0.218025156380447,0,0.58328969722285,1.1198913730029,1.43752564364972,0,0,0.336093799142464,1.28629718017973,0.85960031981627,2.06268836910977,0,0,0,0.677689064138264,0,0.899899717281399,0,0.7104801149461,0.898800331555214,0,0,0,0,0,0,0,0,0.919218786610021,0,0.127687338085188,0.307213066512487,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,4.46784540665786,1.96486056277642,0.289864488701678,0,1.3599426674155,2.15881276655127,0.649776417447669,1.34408066129201,0.280888840263504,1.36344258062446,0.519572009205738,0.70667914902068,0,2.56652954828636,2.54805239706646,0,0.432982082022428,0.760079596425296,0,0.22836775943812,0.258937883647172,0.742210695324124,0.173485326766136,0,0.461230994512117,0.301445281105245,0,0.251333182659351,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0.484875253135222,0,0.292780797011547,0,0.510914110417183,0.479260498023681,0,0.508280908292259,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0,0.373220911830279,0,0,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0.393528463494808,0,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0.243206428637567,0,0,0.402619256281115,0,0,0.991256348951394,0,0,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0,0,0.38992817423824,0,0.648414149624083,0,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0.889357881261447,0.166845105716094,0,0.449724224769707,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,0,0.823684239564244,0,1.11642284300551,0.312037673114561,1.01031551178845,0.717589654087649,0,0.184753190166605,0,0,0.169745085775188,0,0.837531287209079,0.476087281772027,0.390267295715598,0,0,0.318909537314974,0.163863314715738,0.172684981865896,0.578596234326046,1.50791283939272,1.08781136763742,0.491764273019036,0,0,0.117211686592203,0.163934945376675,0,2.2085575359138,2.34263246577983,0.215423397732799,0.238968797952552,0.445597348164788,1.41538265394416,1.21443210502468,2.63030272120181,0.395287777946524,0,0.425820255624806,0,0.162886959353576,0.164970122972535,2.65490276679926,0,0,0,0,0.922305443831782,0,0,0,0.632073515871632,0,1.03135543248187,0.680879211507576,0.18006109403131,0,0,0,0,0,0.304464949114599,1.40803024838226,2.33015277950202,1.10264199027481,0.8244312647074,0.161464426695906,0.241251699712623,0.358117032009409,0.820704498725306,0,0.18542530201051,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0.339956859987711,0.279902904647316,0.829199842826543,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0.299033092087958,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,3.99574716073316,3.58855426437903,4.7007692581942,0,0.750729901804728,0,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.532427418478012,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0,0.197008964751127,0,0,0,0,0,0,0.191288332068843,0.661774257358546,0.463735671240843 | |phase1_expression=0,0.697950815278722,0.454999239389536,1.20985684522732,0,0,0.233612640595526,0,0.281577444303333,0.234064526321993,0,0.159544317990673,0,0.174840804837995,0.333109761815663,0.607425802169478,1.39912375625629,0.157731082679119,0,0,0.0850432901510698,0.397163804803541,0.261199789138935,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0,0,2.92972141515835,2.3440060335714,2.09409497589519,2.35292595212406,1.36609096991689,2.91306211818692,4.78407908307194,4.56196190487815,4.9557623083654,0,0.218025156380447,0,0.58328969722285,1.1198913730029,1.43752564364972,0,0,0.336093799142464,1.28629718017973,0.85960031981627,2.06268836910977,0,0,0,0.677689064138264,0,0.899899717281399,0,0.7104801149461,0.898800331555214,0,0,0,0,0,0,0,0,0.919218786610021,0,0.127687338085188,0.307213066512487,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,4.46784540665786,1.96486056277642,0.289864488701678,0,1.3599426674155,2.15881276655127,0.649776417447669,1.34408066129201,0.280888840263504,1.36344258062446,0.519572009205738,0.70667914902068,0,2.56652954828636,2.54805239706646,0,0.432982082022428,0.760079596425296,0,0.22836775943812,0.258937883647172,0.742210695324124,0.173485326766136,0,0.461230994512117,0.301445281105245,0,0.251333182659351,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0.484875253135222,0,0.292780797011547,0,0.510914110417183,0.479260498023681,0,0.508280908292259,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0,0.373220911830279,0,0,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0.393528463494808,0,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0.243206428637567,0,0,0.402619256281115,0,0,0.991256348951394,0,0,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0,0,0.38992817423824,0,0.648414149624083,0,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0.889357881261447,0.166845105716094,0,0.449724224769707,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,0,0.823684239564244,0,1.11642284300551,0.312037673114561,1.01031551178845,0.717589654087649,0,0.184753190166605,0,0,0.169745085775188,0,0.837531287209079,0.476087281772027,0.390267295715598,0,0,0.318909537314974,0.163863314715738,0.172684981865896,0.578596234326046,1.50791283939272,1.08781136763742,0.491764273019036,0,0,0.117211686592203,0.163934945376675,0,2.2085575359138,2.34263246577983,0.215423397732799,0.238968797952552,0.445597348164788,1.41538265394416,1.21443210502468,2.63030272120181,0.395287777946524,0,0.425820255624806,0,0.162886959353576,0.164970122972535,2.65490276679926,0,0,0,0,0.922305443831782,0,0,0,0.632073515871632,0,1.03135543248187,0.680879211507576,0.18006109403131,0,0,0,0,0,0.304464949114599,1.40803024838226,2.33015277950202,1.10264199027481,0.8244312647074,0.161464426695906,0.241251699712623,0.358117032009409,0.820704498725306,0,0.18542530201051,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0.339956859987711,0.279902904647316,0.829199842826543,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0.299033092087958,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,3.99574716073316,3.58855426437903,4.7007692581942,0,0.750729901804728,0,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.532427418478012,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0,0.197008964751127,0,0,0,0,0,0,0.191288332068843,0.661774257358546,0.463735671240843 | ||
|short_description=p8@Mdm2 | |short_description=p8@Mdm2 | ||
}} | }} |
Latest revision as of 15:43, 25 September 2015
Short description: | p8@Mdm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Mdm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2520 |
Association with transcript: | -10bp_to_ENSMUST00000137102_5end |
EntrezGene: | Mdm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.49e-16 | 9 |
muscle precursor cell | 2.66e-10 | 6 |
muscle cell | 2.66e-10 | 6 |
myoblast | 2.66e-10 | 6 |
smooth muscle cell | 8.14e-09 | 3 |
vascular associated smooth muscle cell | 8.14e-09 | 3 |
aortic smooth muscle cell | 8.14e-09 | 3 |
smooth muscle myoblast | 8.14e-09 | 3 |
mesodermal cell | 9.13e-09 | 7 |
embryonic cell | 1.12e-08 | 70 |
extraembryonic cell | 1.35e-08 | 3 |
trophoblast cell | 1.35e-08 | 3 |
stem cell | 1.59e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.49e-16 | 9 |
striated muscle tissue | 1.49e-16 | 9 |
muscle tissue | 1.49e-16 | 9 |
multilaminar epithelium | 1.49e-16 | 9 |
epithelial vesicle | 1.49e-16 | 9 |
musculature | 1.49e-16 | 9 |
somite | 1.49e-16 | 9 |
myotome | 1.49e-16 | 9 |
presomitic mesoderm | 1.49e-16 | 9 |
presumptive segmental plate | 1.49e-16 | 9 |
dermomyotome | 1.49e-16 | 9 |
trunk paraxial mesoderm | 1.49e-16 | 9 |
musculature of body | 9.53e-15 | 10 |
dense mesenchyme tissue | 2.86e-13 | 11 |
paraxial mesoderm | 2.86e-13 | 11 |
presumptive paraxial mesoderm | 2.86e-13 | 11 |
peripheral nervous system | 1.28e-09 | 11 |
smooth muscle tissue | 8.14e-09 | 3 |
blood vessel smooth muscle | 8.14e-09 | 3 |
arterial system smooth muscle | 8.14e-09 | 3 |
artery smooth muscle tissue | 8.14e-09 | 3 |
aorta smooth muscle tissue | 8.14e-09 | 3 |
blastocyst | 1.35e-08 | 3 |
blastula | 1.35e-08 | 3 |
cleaving embryo | 1.35e-08 | 3 |
trunk mesenchyme | 6.16e-07 | 45 |
musculoskeletal system | 9.01e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.94e-08 | 3 |
muscle cancer | 5.94e-08 | 3 |