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FFCP PHASE1:Mm9::chr14:112074082..112074146,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=75409
|EntrezGene=75409
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q810B7,Q69ZV6
|UniProt=Q810B7,Q69ZV6
|association_with_transcript=-190bp_to_ENSMUST00000042767,NM_198865,uc011zpr.1_5end
|association_with_transcript=-190bp_to_ENSMUST00000042767,NM_198865,uc011zpr.1_5end
|cluster_id=chr14:112074082..112074146,+
|description=CAGE_peak_1_at_Slitrk5_5end
|description=CAGE_peak_1_at_Slitrk5_5end
|id=chr14:112074082..112074146,+
|id=chr14:112074082..112074146,+
|ontology_enrichment_celltype=CL:0000540!1.17e-17!33;CL:0000047!1.17e-17!33;CL:0000031!1.17e-17!33;CL:0000404!1.17e-17!33;CL:0002319!7.46e-16!43;CL:0000221!1.39e-15!44;CL:0000133!1.39e-15!44;CL:0000393!1.81e-14!39;CL:0000211!1.81e-14!39;CL:0000117!3.24e-14!23;CL:0000337!3.24e-14!23;CL:0000055!8.24e-13!50
|ontology_enrichment_celltype_v019_2=CL:0000540,7.18e-21,33;CL:0000047,7.18e-21,33;CL:0000031,7.18e-21,33;CL:0000404,7.18e-21,33;CL:0000393,2.07e-17,39;CL:0000211,2.07e-17,39;CL:0000117,3.40e-17,23;CL:0000337,3.40e-17,23;CL:0002319,2.61e-16,43;CL:0000221,1.30e-15,44;CL:0000133,1.30e-15,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.01e-36!73;UBERON:0005743!3.01e-36!73;UBERON:0000073!2.16e-35!75;UBERON:0001016!2.16e-35!75;UBERON:0004121!7.02e-28!102;UBERON:0000924!7.02e-28!102;UBERON:0006601!7.02e-28!102;UBERON:0002346!9.74e-28!71;UBERON:0003075!9.74e-28!71;UBERON:0007284!9.74e-28!71;UBERON:0001049!1.62e-26!52;UBERON:0005068!1.62e-26!52;UBERON:0006241!1.62e-26!52;UBERON:0007135!1.62e-26!52;UBERON:0000955!2.09e-25!50;UBERON:0006238!2.09e-25!50;UBERON:0002616!1.35e-24!49;UBERON:0000033!3.10e-24!63;UBERON:0003056!1.30e-22!49;UBERON:0003080!1.63e-21!40;UBERON:0002020!4.41e-21!34;UBERON:0002780!8.36e-21!39;UBERON:0001890!8.36e-21!39;UBERON:0006240!8.36e-21!39;UBERON:0002791!7.15e-18!29;UBERON:0003528!7.15e-18!29;UBERON:0001893!7.15e-18!29;UBERON:0000956!3.07e-13!21;UBERON:0001869!3.07e-13!21;UBERON:0000203!3.07e-13!21;UBERON:0007811!2.30e-11!86;UBERON:0002619!4.78e-11!17;UBERON:0000153!2.42e-10!94;UBERON:0002021!1.63e-08!10;UBERON:0000411!1.63e-08!10;UBERON:0001950!1.63e-08!10;UBERON:0000025!3.27e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.94e-41,73;UBERON:0001016,6.45e-39,75;UBERON:0002346,4.96e-34,64;UBERON:0003075,4.96e-34,64;UBERON:0007284,4.96e-34,64;UBERON:0000073,7.31e-33,54;UBERON:0004121,2.42e-32,95;UBERON:0000924,2.42e-32,95;UBERON:0006601,2.42e-32,95;UBERON:0001049,5.30e-31,52;UBERON:0005068,5.30e-31,52;UBERON:0006241,5.30e-31,52;UBERON:0007135,5.30e-31,52;UBERON:0000955,5.10e-27,47;UBERON:0006238,5.10e-27,47;UBERON:0010371,8.96e-27,73;UBERON:0002616,4.76e-26,46;UBERON:0003056,5.25e-26,49;UBERON:0002020,1.09e-25,34;UBERON:0003080,2.48e-25,40;UBERON:0002780,1.85e-24,39;UBERON:0001890,1.85e-24,39;UBERON:0006240,1.85e-24,39;UBERON:0010314,1.09e-23,92;UBERON:0003528,1.02e-21,29;UBERON:0002791,1.02e-21,29;UBERON:0001893,1.02e-21,29;UBERON:0000956,5.46e-16,21;UBERON:0001869,5.46e-16,21;UBERON:0000203,5.46e-16,21;UBERON:0002619,2.80e-13,17;UBERON:0002021,3.75e-10,10;UBERON:0000411,3.75e-10,10;UBERON:0001950,3.75e-10,10;UBERON:0000025,7.97e-09,114;UBERON:0004111,4.55e-07,122;UBERON:0002420,7.11e-07,8;UBERON:0007245,7.11e-07,8;UBERON:0010009,7.11e-07,8;UBERON:0010011,7.11e-07,8;UBERON:0000454,7.11e-07,8
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.82478476195126,0.183546752161682,0.782391344348039,0,1.09843091367236,1.74986909166855,0.979904951377538,2.87505128729943,0,0,0,0,0,0,10.1158230429799,15.340738398889,19.0149421051854,1.35537812827653,0,0,0,0,1.19840044207362,0.384218305321555,5.08079100311541,9.85543349821342,9.67494822216357,22.2807767834967,13.4729809980484,9.0643191419066,4.31304619582064,20.2228133054205,24.2254938198655,18.7700386985226,18.8936035905179,12.265424758908,6.86157327018072,8.85552729946492,17.3093459380856,15.757353080887,10.8486755921535,15.0260578591571,19.2201769078789,13.047961207771,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.983110940922263,0,0,0,0.281686839553361,0,2.54805239706646,0,0,0.253359865475099,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0.913396434936424,0.461230994512117,0.301445281105245,0.470354828542819,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0,0,0,6.14839673724249,5.86450779077674,0,0,0,0,21.7196427136993,24.7050325522058,10.5549655774806,35.1125126788398,33.243009452943,10.5971902725376,17.5220564113178,0.916554274652847,0,0,0.631325567659422,1.95180664444056,2.06911893990126,3.96136685571768,1.50704817835715,1.56483948048054,1.40925092313335,1.68663104207512,1.29351685369508,0.862271971731369,1.89106080167819,0.351902248327898,0.219195732427575,0.834141747676794,0,0,1.59227413454795,0,0,0,4.76389276831654,6.0976775595085,3.6012412292203,3.07768156260773,3.14822770795846,1.85120535464854,1.86027155800326,1.3413670069981,0.934122738937356,0.493679549740441,0,0,0,0.219550115291051,0.134206418760372,32.3846520788756,8.02655976558419,0,0,2.77274725695804,3.25131340604614,0.902072229254653,1.00841762311671,0.667134131534611,1.14135375667535,0.474529061544512,0.988193728344065,0,0.795825888164603,0.38992817423824,0,0,0,0,0.342745537829186,1.1270773567308,0.407302655690628,0,0.210407459670956,0,0,0,0,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.339490171550376,0.469380496577004,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,11.8807436590966,13.5965556446956,0,0,5.04813151066011,7.80877488593277,6.46270193198397,2.86762557543062,4.23317480756549,5.09537755419898,6.07216052512342,8.76767573733936,3.16230222357219,33.0960955914461,0,1.24645922567079,2.60619134965722,0.329940245945071,0,3.64170954232472,1.51161778482376,0.377210159511796,0.590603785761546,0.307435147943927,0.516856586336442,0.363533729477506,0,0,0,0,2.38307724027652,1.08036656418786,0.905510786479282,1.71469628025274,3.54680467284547,5.88617098086833,4.93647061806363,3.04464949114599,0,0,0.220528398054962,0,0,0,0.119372344003136,0,0,15.2048747648618,0,1.65109494370578,0.185194527369712,0,0,0,0,0,0,0,3.00519193902079,1.62655573701479,0.756037385752609,0.627264888043406,1.09181281873089,0.539457385539283,0.247960367176008,0,0,0,0,0,0.165458490457098,1.94451188344048,1.93739735216597,2.70329800785245,6.68936260280798,1.5624526181274,0.734015410979976,0.483168241652012,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,24.8490810751509,30.3814656094737,24.0616115644547,51.3841015207626,24.6629707117431,40.7912704590438,25.6508550088086,28.3702358031259,30.3605414019417,20.7104124700728,0.93408612825759,2.39414924040619,2.21953687480374,1.21553358534147,2.51535795153579,0.919217542250071,2.00022055021454,1.44224540067226,1.60459604795908,2.27427490587418,2.28131369901216,0.565879024158229,1.77918864192777,1.6646539625266,2.06767688240208,2.85776214769844,0.811190281613988,0.964546102318525,1.23625770240992,1.47198920134397,4.11443102862498,2.12970967391205,1.90748951957857,1.59881058295561,1.97629698872194,3.46919892355874,1.82927972872773,2.36762740294059,1.7654534799962,2.80571135828869,1.54225523561426,0.985044823755635,0.818462086339379,1.39443157067369,1.35034627686799,3.49734809113124,1.87145286756327,1.28922632428979,0.956441660344217,0.220591419119515,0.695603506861264
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.82478476195126,0.183546752161682,0.782391344348039,0,1.09843091367236,1.74986909166855,0.979904951377538,2.87505128729943,0,0,0,0,0,0,10.1158230429799,15.340738398889,19.0149421051854,1.35537812827653,0,0,0,0,1.19840044207362,0.384218305321555,5.08079100311541,9.85543349821342,9.67494822216357,22.2807767834967,13.4729809980484,9.0643191419066,4.31304619582064,20.2228133054205,24.2254938198655,18.7700386985226,18.8936035905179,12.265424758908,6.86157327018072,8.85552729946492,17.3093459380856,15.757353080887,10.8486755921535,15.0260578591571,19.2201769078789,13.047961207771,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.983110940922263,0,0,0,0.281686839553361,0,2.54805239706646,0,0,0.253359865475099,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0.913396434936424,0.461230994512117,0.301445281105245,0.470354828542819,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0,0,0,6.14839673724249,5.86450779077674,0,0,0,0,21.7196427136993,24.7050325522058,10.5549655774806,35.1125126788398,33.243009452943,10.5971902725376,17.5220564113178,0.916554274652847,0,0,0.631325567659422,1.95180664444056,2.06911893990126,3.96136685571768,1.50704817835715,1.56483948048054,1.40925092313335,1.68663104207512,1.29351685369508,0.862271971731369,1.89106080167819,0.351902248327898,0.219195732427575,0.834141747676794,0,0,1.59227413454795,0,0,0,4.76389276831654,6.0976775595085,3.6012412292203,3.07768156260773,3.14822770795846,1.85120535464854,1.86027155800326,1.3413670069981,0.934122738937356,0.493679549740441,0,0,0,0.219550115291051,0.134206418760372,32.3846520788756,8.02655976558419,0,0,2.77274725695804,3.25131340604614,0.902072229254653,1.00841762311671,0.667134131534611,1.14135375667535,0.474529061544512,0.988193728344065,0,0.795825888164603,0.38992817423824,0,0,0,0,0.342745537829186,1.1270773567308,0.407302655690628,0,0.210407459670956,0,0,0,0,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.339490171550376,0.469380496577004,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,11.8807436590966,13.5965556446956,0,0,5.04813151066011,7.80877488593277,6.46270193198397,2.86762557543062,4.23317480756549,5.09537755419898,6.07216052512342,8.76767573733936,3.16230222357219,33.0960955914461,0,1.24645922567079,2.60619134965722,0.329940245945071,0,3.64170954232472,1.51161778482376,0.377210159511796,0.590603785761546,0.307435147943927,0.516856586336442,0.363533729477506,0,0,0,0,2.38307724027652,1.08036656418786,0.905510786479282,1.71469628025274,3.54680467284547,5.88617098086833,4.93647061806363,3.04464949114599,0,0,0.220528398054962,0,0,0,0.119372344003136,0,0,15.2048747648618,0,1.65109494370578,0.185194527369712,0,0,0,0,0,0,0,3.00519193902079,1.62655573701479,0.756037385752609,0.627264888043406,1.09181281873089,0.539457385539283,0.247960367176008,0,0,0,0,0,0.165458490457098,1.94451188344048,1.93739735216597,2.70329800785245,6.68936260280798,1.5624526181274,0.734015410979976,0.483168241652012,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,24.8490810751509,30.3814656094737,24.0616115644547,51.3841015207626,24.6629707117431,40.7912704590438,25.6508550088086,28.3702358031259,30.3605414019417,20.7104124700728,0.93408612825759,2.39414924040619,2.21953687480374,1.21553358534147,2.51535795153579,0.919217542250071,2.00022055021454,1.44224540067226,1.60459604795908,2.27427490587418,2.28131369901216,0.565879024158229,1.77918864192777,1.6646539625266,2.06767688240208,2.85776214769844,0.811190281613988,0.964546102318525,1.23625770240992,1.47198920134397,4.11443102862498,2.12970967391205,1.90748951957857,1.59881058295561,1.97629698872194,3.46919892355874,1.82927972872773,2.36762740294059,1.7654534799962,2.80571135828869,1.54225523561426,0.985044823755635,0.818462086339379,1.39443157067369,1.35034627686799,3.49734809113124,1.87145286756327,1.28922632428979,0.956441660344217,0.220591419119515,0.695603506861264
|short_description=p1@Slitrk5
|short_description=p1@Slitrk5
}}
}}

Latest revision as of 15:58, 25 September 2015

Short description:p1@Slitrk5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Slitrk5_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -190bp_to_ENSMUST00000042767, NM_198865, uc011zpr.1_5end
EntrezGene:Slitrk5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Slitrk5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C310.12
Mouse Granule cells, donor2.CNhs12357.11731-123E315.34
Mouse Granule cells, donor3.CNhs12108.11636-122C719.01
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.08
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.86
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.67
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F122.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.47
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.31
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D620.22
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D324.23
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.89
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.27
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.86
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.31
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.85
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.03
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.22
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I25.86
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A421.72
corpus striatum, adult.CNhs10487.19-21D824.71
corpus striatum, neonate N00.CNhs11226.630-43F110.55
cortex, adult.CNhs10473.12-14D535.11
cortex, neonate N30.CNhs11107.1392-42F233.24
diencephalon, adult.CNhs10482.20-12F210.60
diencephalon, neonate N30.CNhs11201.1388-42B217.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.76
heart, embryo E12.CNhs11015.353-12F56.10
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E832.38
hippocampus, neonate N00.CNhs11228.627-43G18.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C211.88
medulla oblongata, neonate N30.CNhs11200.1396-42A313.60
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.81
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.46
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.77
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I933.10
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I42.61
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F65.89
pituitary gland, embryo E17.CNhs11039.1265-44F54.94
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C915.20
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B76.69
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A124.85
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A230.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A324.06
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D751.38
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A424.66
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A540.79
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A625.65
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A728.37
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A830.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A920.71
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron7.18e-2133
neuronal stem cell7.18e-2133
neuroblast7.18e-2133
electrically signaling cell7.18e-2133
electrically responsive cell2.07e-1739
electrically active cell2.07e-1739
CNS neuron (sensu Vertebrata)3.40e-1723
neuroblast (sensu Vertebrata)3.40e-1723
neural cell2.61e-1643
ectodermal cell1.30e-1544
neurectodermal cell1.30e-1544

Uber anatomy
Ontology termp-valuen
central nervous system8.94e-4173
nervous system6.45e-3975
neurectoderm4.96e-3464
neural plate4.96e-3464
presumptive neural plate4.96e-3464
regional part of nervous system7.31e-3354
ectoderm-derived structure2.42e-3295
ectoderm2.42e-3295
presumptive ectoderm2.42e-3295
neural tube5.30e-3152
neural rod5.30e-3152
future spinal cord5.30e-3152
neural keel5.30e-3152
brain5.10e-2747
future brain5.10e-2747
ecto-epithelium8.96e-2773
regional part of brain4.76e-2646
pre-chordal neural plate5.25e-2649
gray matter1.09e-2534
anterior neural tube2.48e-2540
regional part of forebrain1.85e-2439
forebrain1.85e-2439
future forebrain1.85e-2439
structure with developmental contribution from neural crest1.09e-2392
brain grey matter1.02e-2129
regional part of telencephalon1.02e-2129
telencephalon1.02e-2129
cerebral cortex5.46e-1621
cerebral hemisphere5.46e-1621
pallium5.46e-1621
regional part of cerebral cortex2.80e-1317
occipital lobe3.75e-1010
visual cortex3.75e-1010
neocortex3.75e-1010
tube7.97e-09114
anatomical conduit4.55e-07122
basal ganglion7.11e-078
nuclear complex of neuraxis7.11e-078
aggregate regional part of brain7.11e-078
collection of basal ganglia7.11e-078
cerebral subcortex7.11e-078
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