FFCP PHASE1:Mm9::chr3:67319548..67319576,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109222 | |EntrezGene=109222 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=73 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BVL6 | |UniProt=Q8BVL6 | ||
|association_with_transcript=-103bp_to_ENSMUST00000054825,NM_001164763,uc008plo.2_5end | |association_with_transcript=-103bp_to_ENSMUST00000054825,NM_001164763,uc008plo.2_5end | ||
|cluster_id=chr3:67319548..67319576,- | |||
|description=CAGE_peak_3_at_Rarres1_5end | |description=CAGE_peak_3_at_Rarres1_5end | ||
|id=chr3:67319548..67319576,- | |id=chr3:67319548..67319576,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.34e-10,70;CL:0000182,4.80e-09,5;CL:0000192,2.45e-08,3;CL:0000359,2.45e-08,3;CL:0002539,2.45e-08,3;CL:0000514,2.45e-08,3;CL:0002319,2.87e-07,43;CL:0002453,2.88e-07,8;CL:0000221,4.88e-07,44;CL:0000133,4.88e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.61e-09,22;UBERON:0007499,1.61e-09,22;UBERON:0006925,1.61e-09,22;UBERON:0009497,1.61e-09,22;UBERON:0000015,1.61e-09,22;UBERON:0002423,1.61e-09,22;UBERON:0006235,1.61e-09,22;UBERON:0008835,1.61e-09,22;UBERON:0003894,1.61e-09,22;UBERON:0004161,1.61e-09,22;UBERON:0008836,1.61e-09,22;UBERON:0009854,5.13e-09,23;UBERON:0009856,5.13e-09,23;UBERON:0001135,2.45e-08,3;UBERON:0004237,2.45e-08,3;UBERON:0004695,2.45e-08,3;UBERON:0002111,2.45e-08,3;UBERON:0004178,2.45e-08,3;UBERON:0002365,3.94e-08,25;UBERON:0002330,3.94e-08,25;UBERON:0005256,7.25e-08,45;UBERON:0001948,1.56e-07,5;UBERON:0002315,1.56e-07,5 | |||
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| ||
|short_description=p3@Rarres1 | |short_description=p3@Rarres1 | ||
}} | }} |
Latest revision as of 16:07, 25 September 2015
Short description: | p3@Rarres1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rarres1_5end |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | -103bp_to_ENSMUST00000054825, NM_001164763, uc008plo.2_5end |
EntrezGene: | Rarres1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.34e-10 | 70 |
hepatocyte | 4.80e-09 | 5 |
smooth muscle cell | 2.45e-08 | 3 |
vascular associated smooth muscle cell | 2.45e-08 | 3 |
aortic smooth muscle cell | 2.45e-08 | 3 |
smooth muscle myoblast | 2.45e-08 | 3 |
neural cell | 2.87e-07 | 43 |
oligodendrocyte precursor cell | 2.88e-07 | 8 |
ectodermal cell | 4.88e-07 | 44 |
neurectodermal cell | 4.88e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
liver | 1.61e-09 | 22 |
epithelial sac | 1.61e-09 | 22 |
digestive gland | 1.61e-09 | 22 |
epithelium of foregut-midgut junction | 1.61e-09 | 22 |
anatomical boundary | 1.61e-09 | 22 |
hepatobiliary system | 1.61e-09 | 22 |
foregut-midgut junction | 1.61e-09 | 22 |
hepatic diverticulum | 1.61e-09 | 22 |
liver primordium | 1.61e-09 | 22 |
septum transversum | 1.61e-09 | 22 |
liver bud | 1.61e-09 | 22 |
digestive tract diverticulum | 5.13e-09 | 23 |
sac | 5.13e-09 | 23 |
smooth muscle tissue | 2.45e-08 | 3 |
blood vessel smooth muscle | 2.45e-08 | 3 |
arterial system smooth muscle | 2.45e-08 | 3 |
artery smooth muscle tissue | 2.45e-08 | 3 |
aorta smooth muscle tissue | 2.45e-08 | 3 |
exocrine gland | 3.94e-08 | 25 |
exocrine system | 3.94e-08 | 25 |
trunk mesenchyme | 7.25e-08 | 45 |
regional part of spinal cord | 1.56e-07 | 5 |
gray matter of spinal cord | 1.56e-07 | 5 |