FFCP PHASE1:Mm9::chr11:75281542..75281598,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:75281542..75281598,+ to FFCP PHASE1:Mm9::chr11:75281542..75281598,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=380712 | |EntrezGene=380712 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=606 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VC26 | |UniProt=Q8VC26 | ||
|association_with_transcript=0bp_to_ENSMUST00000043598,ENSMUST00000108435,NM_027249,uc007kdw.1,uc011xzl.1_5end | |||
|cluster_id=chr11:75281542..75281598,+ | |||
|description=CAGE_peak_1_at_Tlcd2_5end | |||
|id=chr11:75281542..75281598,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.52e-13!22;UBERON:0007499!7.52e-13!22;UBERON:0006925!7.52e-13!22;UBERON:0009497!7.52e-13!22;UBERON:0000015!7.52e-13!22;UBERON:0002423!7.52e-13!22;UBERON:0006235!7.52e-13!22;UBERON:0008835!7.52e-13!22;UBERON:0003894!7.52e-13!22;UBERON:0004161!7.52e-13!22;UBERON:0008836!7.52e-13!22;UBERON:0009854!2.11e-11!23;UBERON:0009856!2.11e-11!23;UBERON:0002365!9.06e-11!25;UBERON:0002330!9.06e-11!25;UBERON:0003914!3.19e-10!47;UBERON:0001007!3.03e-09!128;UBERON:0001555!3.03e-09!128;UBERON:0007026!3.03e-09!128;UBERON:0005256!5.51e-09!47;UBERON:0004119!1.08e-08!130;UBERON:0000925!1.08e-08!130;UBERON:0006595!1.08e-08!130;UBERON:0005172!1.54e-08!49;UBERON:0005173!1.54e-08!49;UBERON:0002417!1.54e-08!49;UBERON:0000916!1.54e-08!49;UBERON:0004921!1.95e-08!126;UBERON:0004185!1.95e-08!126;UBERON:0000466!9.37e-08!79;UBERON:0005409!9.62e-08!59;UBERON:0000160!4.52e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.20e-13,22;UBERON:0007499,5.20e-13,22;UBERON:0006925,5.20e-13,22;UBERON:0009497,5.20e-13,22;UBERON:0000015,5.20e-13,22;UBERON:0002423,5.20e-13,22;UBERON:0006235,5.20e-13,22;UBERON:0008835,5.20e-13,22;UBERON:0003894,5.20e-13,22;UBERON:0004161,5.20e-13,22;UBERON:0008836,5.20e-13,22;UBERON:0009854,1.07e-11,23;UBERON:0009856,1.07e-11,23;UBERON:0002365,7.39e-11,25;UBERON:0002330,7.39e-11,25;UBERON:0003914,3.61e-10,47;UBERON:0005256,2.33e-09,45;UBERON:0001007,2.58e-09,116;UBERON:0001555,2.58e-09,116;UBERON:0007026,2.58e-09,116;UBERON:0005172,1.23e-08,49;UBERON:0005173,1.23e-08,49;UBERON:0002417,1.23e-08,49;UBERON:0000916,1.23e-08,49;UBERON:0004119,1.65e-08,118;UBERON:0000925,1.65e-08,118;UBERON:0006595,1.65e-08,118;UBERON:0004921,1.73e-08,114;UBERON:0005409,2.94e-08,47;UBERON:0000160,5.57e-08,31;UBERON:0003104,8.03e-08,61;UBERON:0009142,8.03e-08,61 | |||
|phase1_expression=3.20297694209588,98.7600403619392,85.9948562446223,53.2337011900021,51.5922601844738,7.55456723603504,8.1764424208434,3.48632973292256,0,0.234064526321993,0.171217968225505,0.239316476986009,0,1.31130603628496,2.33176833270964,3.03712901084739,2.09868563438444,1.10411757875383,0.685572168028694,2.97072756258621,1.10556277196391,0,0,54.8774010181385,50.2406325537102,51.1066448062368,40.9223896351121,33.8289835316846,26.2232318849796,25.455043105753,23.0599731081517,0.635030673459631,1.84519436275371,0,0.288851619751275,2.1610503896604,1.22501613757421,0,1.5626706890476,0,0,0.683045484958446,0,4.40638862914521,3.34543873024398,4.9557623083654,3.12956537739216,3.2703773457067,3.95435128922049,0.777719596297134,6.29938897314131,4.31257693094915,0.838913030288682,0,0,7.20326420900652,14.6132054368766,12.8918023069361,0.606949382578793,0.528990979272033,0.633831403506179,2.71075625655306,1.77858959222228,1.7997994345628,1.97773272513395,2.1314403448383,1.49800055259202,0.384218305321555,0,0.270011876663381,0.210324961351382,0.285650984403804,0.662605622854841,0.122490799214954,0.0958454710182364,0,1.10115880999389,0.127687338085188,0,0,0.457438218012048,0,0.558365998002762,0.56276261003168,0,0.589257170947335,0.996601765593721,0.372798891650601,0.227178579999552,3.47629176491213,10.7249860819621,122.180190531357,38.078394687634,153.815409616778,124.757072149952,105.734345354971,31.7404389497759,1.53387290320252,1.29893002301434,0.35333957451034,3.09855523508697,0,0,0,3.030874574157,3.29367825117628,1.51657333504435,31.7431185618987,0.517875767294343,4.89859058913922,5.03107447621794,3.95805121805784,2.30615497256059,3.3158980921577,2.82212897125692,11.3099932196708,1.73036477414062,4.77177877835708,0.884610551949874,2.91180329905337,5.96272099843063,4.84875253135222,0,0,0.209446706813455,18.6483650302272,4.43315960671905,3.59941638596045,3.81210681219194,0.449371918214468,0,0,0,0.255715457330331,0.20778804455956,0.162241263067758,4.3790926455636,2.11491850037158,1.76905930903572,424.250781467132,2.73252930221678,2.98872735763515,3.78130472591233,3.0140963567143,2.04109497453984,1.66547836370305,1.12442069471675,99.600797734521,1.29340795759705,1.51284864134255,3.87092473160687,3.5071317188412,4.17070873838397,6.268538997399,4.11564272815887,2.9855140022774,4.91549231119264,4.37491442095016,3.6941254921427,3.10688658803253,1.40715635988658,2.52086886045421,2.3674473558521,1.18058539048442,0.925602677324269,1.16266972375204,1.60964040839772,1.86824547787471,2.30383789878873,3.94001913789829,5.75588547775576,5.4093995347373,8.12335426576887,5.09984391289413,0,0,48.2411423156345,81.4507745323716,2.34617075588757,1.62565670302307,3.8660238396628,2.8235693447268,2.89091456998331,5.89699440948933,30.3698599388487,14.3288090609889,19.1014758688205,22.2831248686089,18.1316601020782,32.357498711552,29.3947747829584,14.1390304010601,3.22435431620239,3.65595240351132,2.25415471346161,2.44381593414377,2.32742984601151,2.17421041659988,2.02356918797623,1.91893192373483,3.45397201251025,1.97435462274881,58.9940727903426,5.17219827719892,8.25547779475453,7.19558759631532,8.31726497692862,11.576503668116,10.6942857748196,16.686375972147,7.62035565842666,21.1412288154823,31.629005436018,24.9334434937897,63.0316099691412,142.707066040118,192.31402729549,67.5420929908714,1.66277871149944,3.97931964718018,4.4000543639347,1.35796068620151,2.11221223459652,1.34005005953453,2.38043640886014,0.390267295715598,2.20689201748667,2.6575762757853,1.91345722388985,2.62181303545181,4.83517949224508,1.44649058581512,3.01582567878545,1.63171705145613,1.96705709207614,0.275936746304732,0.321101179975584,0.234423373184406,0,5.80683132570058,0,0,0,0.716906393857656,0.668396022247182,0,0.404810701674894,0.292255857911312,0,0,5.39372323791421,8.369083372361,3.90928702448583,3.13443233647817,2.65490276679926,3.39892890616974,3.02323556964751,1.88605079755898,2.95301892880773,3.68922177532713,5.16856586336442,2.90826983582004,1.78248689192361,3.79244109522979,4.21674434299995,2.06271086496374,1.02131881726136,2.70091641046965,2.8458910432206,2.57204442037911,8.6896714484714,5.35106452806212,4.27827453565514,3.04464949114599,0.938686832254841,0.847328283455281,2.20528398054962,10.3878339353132,7.26589920131575,7.84068024066026,7.40108532819446,6.56563598980245,22.7355052571284,0.556275906031529,2.22132145037209,3.30218988741156,2.77791791054568,3.76736914009382,4.23752105935178,2.97411625168479,4.07948231985253,6.85762116385924,4.00779924032829,5.72802370809068,4.11236791655476,5.28630614529807,3.24016022465404,2.71814784818809,4.36725127492355,1.88810084938749,4.95920734352016,1.57053565190418,5.18459893167171,3.10669656543463,0.56369293868419,3.58839710505549,5.29467169462712,4.66682852025714,5.68303223302017,6.42033276864957,4.22486059124714,4.03633593016245,2.72634295506848,2.89900944991207,1.44015003128933,2.21207784439725,5.27085559754427,5.13554785824136,4.02754551231165,3.40150721768215,3.17890167650024,1.44234539423963,1.77227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| |phase1_expression=3.20297694209588,98.7600403619392,85.9948562446223,53.2337011900021,51.5922601844738,7.55456723603504,8.1764424208434,3.48632973292256,0,0.234064526321993,0.171217968225505,0.239316476986009,0,1.31130603628496,2.33176833270964,3.03712901084739,2.09868563438444,1.10411757875383,0.685572168028694,2.97072756258621,1.10556277196391,0,0,54.8774010181385,50.2406325537102,51.1066448062368,40.9223896351121,33.8289835316846,26.2232318849796,25.455043105753,23.0599731081517,0.635030673459631,1.84519436275371,0,0.288851619751275,2.1610503896604,1.22501613757421,0,1.5626706890476,0,0,0.683045484958446,0,4.40638862914521,3.34543873024398,4.9557623083654,3.12956537739216,3.2703773457067,3.95435128922049,0.777719596297134,6.29938897314131,4.31257693094915,0.838913030288682,0,0,7.20326420900652,14.6132054368766,12.8918023069361,0.606949382578793,0.528990979272033,0.633831403506179,2.71075625655306,1.77858959222228,1.7997994345628,1.97773272513395,2.1314403448383,1.49800055259202,0.384218305321555,0,0.270011876663381,0.210324961351382,0.285650984403804,0.662605622854841,0.122490799214954,0.0958454710182364,0,1.10115880999389,0.127687338085188,0,0,0.457438218012048,0,0.558365998002762,0.56276261003168,0,0.589257170947335,0.996601765593721,0.372798891650601,0.227178579999552,3.47629176491213,10.7249860819621,122.180190531357,38.078394687634,153.815409616778,124.757072149952,105.734345354971,31.7404389497759,1.53387290320252,1.29893002301434,0.35333957451034,3.09855523508697,0,0,0,3.030874574157,3.29367825117628,1.51657333504435,31.7431185618987,0.517875767294343,4.89859058913922,5.03107447621794,3.95805121805784,2.30615497256059,3.3158980921577,2.82212897125692,11.3099932196708,1.73036477414062,4.77177877835708,0.884610551949874,2.91180329905337,5.96272099843063,4.84875253135222,0,0,0.209446706813455,18.6483650302272,4.43315960671905,3.59941638596045,3.81210681219194,0.449371918214468,0,0,0,0.255715457330331,0.20778804455956,0.162241263067758,4.3790926455636,2.11491850037158,1.76905930903572,424.250781467132,2.73252930221678,2.98872735763515,3.78130472591233,3.0140963567143,2.04109497453984,1.66547836370305,1.12442069471675,99.600797734521,1.29340795759705,1.51284864134255,3.87092473160687,3.5071317188412,4.17070873838397,6.268538997399,4.11564272815887,2.9855140022774,4.91549231119264,4.37491442095016,3.6941254921427,3.10688658803253,1.40715635988658,2.52086886045421,2.3674473558521,1.18058539048442,0.925602677324269,1.16266972375204,1.60964040839772,1.86824547787471,2.30383789878873,3.94001913789829,5.75588547775576,5.4093995347373,8.12335426576887,5.09984391289413,0,0,48.2411423156345,81.4507745323716,2.34617075588757,1.62565670302307,3.8660238396628,2.8235693447268,2.89091456998331,5.89699440948933,30.3698599388487,14.3288090609889,19.1014758688205,22.2831248686089,18.1316601020782,32.357498711552,29.3947747829584,14.1390304010601,3.22435431620239,3.65595240351132,2.25415471346161,2.44381593414377,2.32742984601151,2.17421041659988,2.02356918797623,1.91893192373483,3.45397201251025,1.97435462274881,58.9940727903426,5.17219827719892,8.25547779475453,7.19558759631532,8.31726497692862,11.576503668116,10.6942857748196,16.686375972147,7.62035565842666,21.1412288154823,31.629005436018,24.9334434937897,63.0316099691412,142.707066040118,192.31402729549,67.5420929908714,1.66277871149944,3.97931964718018,4.4000543639347,1.35796068620151,2.11221223459652,1.34005005953453,2.38043640886014,0.390267295715598,2.20689201748667,2.6575762757853,1.91345722388985,2.62181303545181,4.83517949224508,1.44649058581512,3.01582567878545,1.63171705145613,1.96705709207614,0.275936746304732,0.321101179975584,0.234423373184406,0,5.80683132570058,0,0,0,0.716906393857656,0.668396022247182,0,0.404810701674894,0.292255857911312,0,0,5.39372323791421,8.369083372361,3.90928702448583,3.13443233647817,2.65490276679926,3.39892890616974,3.02323556964751,1.88605079755898,2.95301892880773,3.68922177532713,5.16856586336442,2.90826983582004,1.78248689192361,3.79244109522979,4.21674434299995,2.06271086496374,1.02131881726136,2.70091641046965,2.8458910432206,2.57204442037911,8.6896714484714,5.35106452806212,4.27827453565514,3.04464949114599,0.938686832254841,0.847328283455281,2.20528398054962,10.3878339353132,7.26589920131575,7.84068024066026,7.40108532819446,6.56563598980245,22.7355052571284,0.556275906031529,2.22132145037209,3.30218988741156,2.77791791054568,3.76736914009382,4.23752105935178,2.97411625168479,4.07948231985253,6.85762116385924,4.00779924032829,5.72802370809068,4.11236791655476,5.28630614529807,3.24016022465404,2.71814784818809,4.36725127492355,1.88810084938749,4.95920734352016,1.57053565190418,5.18459893167171,3.10669656543463,0.56369293868419,3.58839710505549,5.29467169462712,4.66682852025714,5.68303223302017,6.42033276864957,4.22486059124714,4.03633593016245,2.72634295506848,2.89900944991207,1.44015003128933,2.21207784439725,5.27085559754427,5.13554785824136,4.02754551231165,3.40150721768215,3.17890167650024,1.44234539423963,1.77227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| ||
|short_description=p1@Tlcd2 | |||
}} | }} |
Latest revision as of 16:16, 25 September 2015
Short description: | p1@Tlcd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tlcd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:606 |
Association with transcript: | 0bp_to_ENSMUST00000043598, ENSMUST00000108435, NM_027249, uc007kdw.1, uc011xzl.1_5end |
EntrezGene: | Tlcd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 5.20e-13 | 22 |
epithelial sac | 5.20e-13 | 22 |
digestive gland | 5.20e-13 | 22 |
epithelium of foregut-midgut junction | 5.20e-13 | 22 |
anatomical boundary | 5.20e-13 | 22 |
hepatobiliary system | 5.20e-13 | 22 |
foregut-midgut junction | 5.20e-13 | 22 |
hepatic diverticulum | 5.20e-13 | 22 |
liver primordium | 5.20e-13 | 22 |
septum transversum | 5.20e-13 | 22 |
liver bud | 5.20e-13 | 22 |
digestive tract diverticulum | 1.07e-11 | 23 |
sac | 1.07e-11 | 23 |
exocrine gland | 7.39e-11 | 25 |
exocrine system | 7.39e-11 | 25 |
epithelial tube | 3.61e-10 | 47 |
trunk mesenchyme | 2.33e-09 | 45 |
digestive system | 2.58e-09 | 116 |
digestive tract | 2.58e-09 | 116 |
primitive gut | 2.58e-09 | 116 |
abdomen element | 1.23e-08 | 49 |
abdominal segment element | 1.23e-08 | 49 |
abdominal segment of trunk | 1.23e-08 | 49 |
abdomen | 1.23e-08 | 49 |
endoderm-derived structure | 1.65e-08 | 118 |
endoderm | 1.65e-08 | 118 |
presumptive endoderm | 1.65e-08 | 118 |
subdivision of digestive tract | 1.73e-08 | 114 |
gastrointestinal system | 2.94e-08 | 47 |
intestine | 5.57e-08 | 31 |
mesenchyme | 8.03e-08 | 61 |
entire embryonic mesenchyme | 8.03e-08 | 61 |