FFCP PHASE1:Mm9::chr16:56037841..56037923,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=52575 | |EntrezGene=52575 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=101 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UFY8 | |UniProt=Q3UFY8 | ||
|association_with_transcript=0bp_to_NM_029092,uc007zmd.1_5end | |association_with_transcript=0bp_to_NM_029092,uc007zmd.1_5end | ||
|cluster_id=chr16:56037841..56037923,- | |||
|description=CAGE_peak_1_at_Rg9mtd1_5end | |description=CAGE_peak_1_at_Rg9mtd1_5end | ||
|id=chr16:56037841..56037923,- | |id=chr16:56037841..56037923,- | ||
|ontology_enrichment_celltype=CL:0000542!2.02e-09!13;CL:0000051!2.02e-09!13;CL:0000838!4.62e-09!12;CL:0000084!2.09e-08!11;CL:0000827!2.09e-08!11;CL:0000791!2.32e-07!9;CL:0000789!2.32e-07!9;CL:0002420!2.32e-07!9;CL:0002419!2.32e-07!9;CL:0000790!2.32e-07!9 | |ontology_enrichment_celltype=CL:0000542!2.02e-09!13;CL:0000051!2.02e-09!13;CL:0000838!4.62e-09!12;CL:0000084!2.09e-08!11;CL:0000827!2.09e-08!11;CL:0000791!2.32e-07!9;CL:0000789!2.32e-07!9;CL:0002420!2.32e-07!9;CL:0002419!2.32e-07!9;CL:0000790!2.32e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.02e-09,13;CL:0000051,2.02e-09,13;CL:0000838,4.62e-09,12;CL:0000084,2.09e-08,11;CL:0000827,2.09e-08,11;CL:0000791,2.32e-07,9;CL:0000789,2.32e-07,9;CL:0002420,2.32e-07,9;CL:0002419,2.32e-07,9;CL:0000790,2.32e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0003929,2.74e-12,55;UBERON:0001041,3.02e-11,80;UBERON:0002368,3.54e-11,60;UBERON:0000949,1.11e-10,72;UBERON:0002530,3.60e-10,65;UBERON:0005911,3.76e-09,69;UBERON:0000490,1.63e-08,66;UBERON:0004119,3.27e-08,118;UBERON:0000925,3.27e-08,118;UBERON:0006595,3.27e-08,118;UBERON:0000072,3.68e-08,27;UBERON:0009854,3.71e-08,23;UBERON:0009856,3.71e-08,23;UBERON:0004921,4.25e-08,114;UBERON:0004177,5.77e-08,29;UBERON:0005057,5.77e-08,29;UBERON:0001048,5.90e-08,134;UBERON:0002107,6.34e-08,22;UBERON:0007499,6.34e-08,22;UBERON:0006925,6.34e-08,22;UBERON:0009497,6.34e-08,22;UBERON:0000015,6.34e-08,22;UBERON:0002423,6.34e-08,22;UBERON:0006235,6.34e-08,22;UBERON:0008835,6.34e-08,22;UBERON:0003894,6.34e-08,22;UBERON:0004161,6.34e-08,22;UBERON:0008836,6.34e-08,22;UBERON:0001007,6.75e-08,116;UBERON:0001555,6.75e-08,116;UBERON:0007026,6.75e-08,116;UBERON:0006562,7.43e-08,24;UBERON:0001557,7.43e-08,24;UBERON:0001042,7.43e-08,24;UBERON:0008814,7.43e-08,24;UBERON:0009145,7.43e-08,24;UBERON:0002370,1.04e-07,23;UBERON:0000974,1.04e-07,23;UBERON:0004807,1.04e-07,23;UBERON:0005058,1.04e-07,23;UBERON:0003351,1.04e-07,23;UBERON:0009113,1.04e-07,23;UBERON:0003295,1.04e-07,23;UBERON:0009722,1.04e-07,23;UBERON:0005562,1.04e-07,23;UBERON:0007690,1.04e-07,23;UBERON:0003408,1.98e-07,24;UBERON:0002365,2.16e-07,25;UBERON:0002330,2.16e-07,25 | |||
|phase1_expression=18.7374151112609,11.8651638597383,7.73498706962211,4.83942738090928,7.51343594919521,22.831580980017,21.0251376535973,34.734174005784,112.771766443485,94.5620686340854,71.5691107182611,72.5128925267608,37.1505583950716,38.8146586740348,23.3176833270964,24.0945568193893,16.7894850750755,41.16781257925,38.8033847104241,23.3414308488917,11.9060606211498,31.0780677258771,32.388773853228,17.2791816616879,19.9586074528438,12.0588712464154,17.6612418425221,20.9007095705312,12.3515222646643,21.4225610295941,18.181901873735,15.2407361630311,14.7615549020297,0,30.3294200738838,39.3976109499627,28.5837098767317,20.0895182753716,25.7840663692854,15.1821885752402,12.3528612486513,15.7100461540443,26.7030694167134,16.366586336825,15.3079166141467,17.9875817118448,4.69434806608824,1.30815093828268,2.19686182734472,3.11087838518853,2.51975558925653,0,45.9724340598198,53.6767985088395,46.0448504825176,14.1492689819771,10.8882707176728,12.8918023069361,9.71119012126069,6.34789175126439,5.07065122804943,4.06613438482959,0.889294796111139,3.5995988691256,2.96659908770092,3.5524005747305,1.19840044207362,4.61061966385865,12.4427534770173,7.83034442323806,9.46462326081219,3.71346279724945,5.74258206474195,13.1065155160001,7.57179221044067,11.9498442259303,8.8092704799511,11.4918604276669,11.6740965274745,6.85808696197008,6.49562269577109,6.25096044668112,9.21303896704557,14.6318278608237,12.835052813252,13.258286346315,12.9558229527184,11.5567656411686,36.0456680265956,17.8348881852014,14.7830889237856,30.1148356943485,84.9964167134688,23.2072372404261,22.7421746106684,34.4980703064948,30.4764391685902,19.0881961287425,12.9893002301434,11.3068663843309,16.760366953425,16.6824420638613,20.3844191765317,21.3320010945999,20.9996309780878,23.055747758234,23.7596489156948,27.6324988920125,31.5904218049549,30.2821963692243,21.8591511725331,19.7902560902892,21.6778567420695,25.4721262533932,21.6363221129697,24.5049853092867,13.3485282576562,37.8850315130169,30.0767587662957,21.5149910430054,20.5382612168166,23.7588874036259,24.2309289583559,15.8101630386235,18.2218634927706,21.2029355823131,26.1196971422906,20.9965955847693,22.9997111002247,16.027598416316,14.640019290196,18.4711897605911,15.4703644971126,13.5529192385075,15.584103341967,16.5486088329113,18.7384429484582,17.7901967972433,14.6579199891531,17.6771158944638,21.7301139747715,25.5191335921155,19.2666478891724,18.3859877759572,17.9616357759506,19.0889443224426,14.6174690313177,15.0047955028629,15.3053274982318,20.6125627382923,20.762232651346,21.7003775103299,15.8486932058591,19.5021213252413,19.1377386859387,18.9082553477569,16.8531164955176,22.1319200118655,29.8371674365372,26.5120988845442,20.6382932783365,19.0865785148676,17.992599904476,21.447301260467,18.5120535464854,23.2533944750408,21.7301455133692,24.4039565547384,27.1523752357243,26.7592966448925,25.6988126260363,29.3861974724918,26.7851140655082,29.6596185460422,12.4071069652835,20.992540925374,7.59963200862735,21.9493970330742,27.7274725695804,25.7782705765087,21.0053961955012,20.1683524623343,17.5678654637448,18.6421113590308,14.7104009078799,19.5991756121573,18.8501406600202,17.110256595539,13.062593836981,17.0775687644302,15.9942156907274,18.9184209591649,11.7594098590911,19.1937501184344,19.1603150644237,21.1797380959127,20.3650111526007,17.4638191526893,20.6151111025079,22.4367424928995,25.5907926381441,21.4711065223933,41.799820419288,29.3647386060326,28.8941722816408,26.3088671490279,23.1260538382893,21.9471215374699,27.7542178441748,21.0018180339092,20.2669033468794,29.6526326243128,35.9420516318386,27.9105710751378,34.9482193888308,35.6136217905428,33.0091240880318,28.946611281802,19.3990849674935,24.8233749419335,23.1410266547677,15.4468028055421,15.7242466353296,16.9181320016234,16.1869675802489,14.6350235893349,18.128041572212,12.8449519996289,23.9182152986231,13.6006551214063,20.8948828057734,20.1062191428301,18.0949540727127,15.2293591469239,16.7199852826472,26.4899276452543,13.9679013289379,17.1129062424617,17.5410391553043,29.791569410116,17.0374438484779,20.6932534477218,15.9413314322271,12.6653462914853,17.6010952525091,17.2676683781188,20.2405350837447,17.5353514746787,16.602086673754,16.3873871375122,19.5877317587411,10.8620018237026,19.8722090411363,20.7862354945395,26.5490276679926,17.7229864393136,19.6510312027088,22.255399411196,10.0402643579463,20.9055900601871,21.4495483329624,17.4496190149203,18.1813662976208,24.6508671189936,20.0295356292498,27.8465966770104,17.0219802876894,19.8067203434441,5.56242340265844,16.289614662401,16.847322196016,15.6964559489822,15.9612549984057,8.82948352432338,23.2324990983073,22.2423674407011,17.8628002424519,19.1268053412117,17.4381580831578,23.5220407219808,18.9802026964987,21.8307396660931,23.0269860937582,13.1651964427462,22.7258271461144,17.9556575128004,22.7789268664745,20.5321618135113,23.2380187125743,27.9109371311958,26.5166350790414,31.908931129794,26.1197950490361,22.9120948323627,22.4598555442606,18.2987520414164,20.5210147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| ||
|short_description=p1@Rg9mtd1 | |short_description=p1@Rg9mtd1 | ||
}} | }} |
Latest revision as of 16:20, 25 September 2015
Short description: | p1@Rg9mtd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rg9mtd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:101 |
Association with transcript: | 0bp_to_NM_029092, uc007zmd.1_5end |
EntrezGene: | Rg9mtd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.02e-09 | 13 |
common lymphoid progenitor | 2.02e-09 | 13 |
lymphoid lineage restricted progenitor cell | 4.62e-09 | 12 |
T cell | 2.09e-08 | 11 |
pro-T cell | 2.09e-08 | 11 |
mature alpha-beta T cell | 2.32e-07 | 9 |
alpha-beta T cell | 2.32e-07 | 9 |
immature T cell | 2.32e-07 | 9 |
mature T cell | 2.32e-07 | 9 |
immature alpha-beta T cell | 2.32e-07 | 9 |