FFCP PHASE1:Mm9::chr2:127188960..127188978,+: Difference between revisions
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{{FFCP|EntrezGene=11552|HGNC=|MCL_coexpression_id=1435|UniProt=Q925K6|association_with_transcript=16bp_to_ENSMUST00000104934_5end|description=CAGE_peak_3_at_Adra2b_5end|id=chr2:127188960..127188978,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,1.64e-07,3;CL:0000351,1.64e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!3.25e-15!49;UBERON:0005173!3.25e-15!49;UBERON:0002417!3.25e-15!49;UBERON:0000916!3.25e-15!49;UBERON:0002107!6.63e-10!22;UBERON:0007499!6.63e-10!22;UBERON:0006925!6.63e-10!22;UBERON:0009497!6.63e-10!22;UBERON:0000015!6.63e-10!22;UBERON:0002423!6.63e-10!22;UBERON:0006235!6.63e-10!22;UBERON:0008835!6.63e-10!22;UBERON:0003894!6.63e-10!22;UBERON:0004161!6.63e-10!22;UBERON:0008836!6.63e-10!22;UBERON:0009569!2.90e-09!66;UBERON:0009854!4.27e-09!23;UBERON:0009856!4.27e-09!23;UBERON:0002365!1.06e-07!25;UBERON:0002330!1.06e-07!25;UBERON:0005177!1.51e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0005172,2.54e-22,49;UBERON:0005173,2.54e-22,49;UBERON:0002417,2.54e-22,49;UBERON:0000916,2.54e-22,49;UBERON:0002107,6.25e-18,22;UBERON:0007499,6.25e-18,22;UBERON:0006925,6.25e-18,22;UBERON:0009497,6.25e-18,22;UBERON:0000015,6.25e-18,22;UBERON:0002423,6.25e-18,22;UBERON:0006235,6.25e-18,22;UBERON:0008835,6.25e-18,22;UBERON:0003894,6.25e-18,22;UBERON:0004161,6.25e-18,22;UBERON:0008836,6.25e-18,22;UBERON:0009854,5.51e-17,23;UBERON:0009856,5.51e-17,23;UBERON:0002365,2.53e-15,25;UBERON:0002330,2.53e-15,25;UBERON:0009569,7.35e-15,66;UBERON:0003104,1.70e-12,61;UBERON:0009142,1.70e-12,61;UBERON:0005177,2.24e-12,79;UBERON:0002100,4.68e-10,90;UBERON:0003914,1.69e-08,47;UBERON:0006554,2.23e-08,18;UBERON:0005256,6.34e-08,45;UBERON:0001008,7.72e-08,19;UBERON:0005631,9.11e-08,3;UBERON:0000478,9.11e-08,3;UBERON:0000158,9.11e-08,3;UBERON:0000358,1.64e-07,3;UBERON:0000307,1.64e-07,3;UBERON:0007010,1.64e-07,3|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0.0992909512008853,0,0,0,0,0,0,0,0,0,1.90509202037889,2.46025915033828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0.122490799214954,0.287536413054709,0,0,1.40456071893706,0.768032666281217,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,2.58127163094416,0,0,0.649776417447669,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,2.62622923353838,0,0,0.520455980298408,0.913396434936424,0.461230994512117,1.05505848386836,0.587943535678524,0.376999773989026,4.94389935468748,0,0,0.485300549842228,0,0,0,0.292780797011547,0.209446706813455,0.510914110417183,0,0,0,0,0.457500602818626,0,0.173824320192276,0.255715457330331,1.24672826735736,0.973447578406546,0.305518091550949,0,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0,0,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0,0.411564272815887,0.398068533636986,0,0,0,1.03562886267751,1.40715635988658,0,0.23674473558521,0,0,0,0.268273401399619,0.350296027101508,0.329119699826961,0,0.972825714550269,0.292399974850665,0,0.402619256281115,0.210289948564127,0,0.330418782983798,0,0.213288250535234,0.232236671860439,0.38660238396628,0,0.444756087689741,0.380451252225118,0,0.329397909448022,0.502670417600539,0.596869416123452,0.38992817423824,1.79763881730844,0,0,0,0.685491075658373,0,1.4255592949172,1.35766741017338,3.0158402552837,7.01925562079256,15.941895981797,6.90794402502049,9.00799296629144,0.592905254174298,7.84171996865642,7.07612382407531,4.27238013531222,4.66578279193557,3.37648023653384,4.07401362850272,4.02774592431135,1.29708181420028,1.37280706594041,1.43768206527355,2.97712758134803,3.74445207737473,2.27320990152401,0.538192240565737,1.4473305640901,0,0.189491411770485,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0.325773918707152,0,0,0.485561272309963,0,0.188605079755898,0.885905678642318,0.307435147943927,0.258428293168221,0,0,0,0,1.03135543248187,0,0,0,0,0,0.178368817602071,0,0,8.91752490642099,27.9618333540243,0.220528398054962,0,0.484393280087717,0.0603129249281559,0,0.164140899745061,0.291480836629851,0,0.341741761595705,2.27025554759545,1.48155621895769,1.13021074202815,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0.216010681643603,0.627264888043406,0,0,0.495920734352016,0,0.388844919875379,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0.25984164595559,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,6.88156455459601,3.76798197759798,9.23365390002431,0.579568782096571,0,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.207574695168353,1.99512436700516,0.853668028770671,0.729320151204882,1.04806581313991,0.183843508450014,1.33348036680969,0.412070114477788,0,0.505394423527595,0.760437899670719,0.565879024158229,0.0936415074698824,0.320125762024346,0.402048282689293,0.476293691283074,0.463537303779422,0.192909220463705,0.824171801606613,0.147198920134397,0.685738504770831,0.354951612318675,0.238436189947321,0.290692833264657,0.376437521661322,0.338458431566706,0.365855945745545,0.263069711437843,0.543216455383447,0,0.355905054372522,0.197008964751127,0,0.154936841185966,0.192906610981141,0.499621155875892,0.467863216890817,0.429742108096597,0.191288332068843,0.661774257358546,0|short_description=p3@Adra2b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11552 | |||
|HGNC= | |||
|MCL_coexpression_id=1435 | |||
|TSSclassifier=NA | |||
|UniProt=Q925K6 | |||
|association_with_transcript=16bp_to_ENSMUST00000104934_5end | |||
|cluster_id=chr2:127188960..127188978,+ | |||
|description=CAGE_peak_3_at_Adra2b_5end | |||
|id=chr2:127188960..127188978,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.64e-07,3;CL:0000351,1.64e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!3.25e-15!49;UBERON:0005173!3.25e-15!49;UBERON:0002417!3.25e-15!49;UBERON:0000916!3.25e-15!49;UBERON:0002107!6.63e-10!22;UBERON:0007499!6.63e-10!22;UBERON:0006925!6.63e-10!22;UBERON:0009497!6.63e-10!22;UBERON:0000015!6.63e-10!22;UBERON:0002423!6.63e-10!22;UBERON:0006235!6.63e-10!22;UBERON:0008835!6.63e-10!22;UBERON:0003894!6.63e-10!22;UBERON:0004161!6.63e-10!22;UBERON:0008836!6.63e-10!22;UBERON:0009569!2.90e-09!66;UBERON:0009854!4.27e-09!23;UBERON:0009856!4.27e-09!23;UBERON:0002365!1.06e-07!25;UBERON:0002330!1.06e-07!25;UBERON:0005177!1.51e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,2.54e-22,49;UBERON:0005173,2.54e-22,49;UBERON:0002417,2.54e-22,49;UBERON:0000916,2.54e-22,49;UBERON:0002107,6.25e-18,22;UBERON:0007499,6.25e-18,22;UBERON:0006925,6.25e-18,22;UBERON:0009497,6.25e-18,22;UBERON:0000015,6.25e-18,22;UBERON:0002423,6.25e-18,22;UBERON:0006235,6.25e-18,22;UBERON:0008835,6.25e-18,22;UBERON:0003894,6.25e-18,22;UBERON:0004161,6.25e-18,22;UBERON:0008836,6.25e-18,22;UBERON:0009854,5.51e-17,23;UBERON:0009856,5.51e-17,23;UBERON:0002365,2.53e-15,25;UBERON:0002330,2.53e-15,25;UBERON:0009569,7.35e-15,66;UBERON:0003104,1.70e-12,61;UBERON:0009142,1.70e-12,61;UBERON:0005177,2.24e-12,79;UBERON:0002100,4.68e-10,90;UBERON:0003914,1.69e-08,47;UBERON:0006554,2.23e-08,18;UBERON:0005256,6.34e-08,45;UBERON:0001008,7.72e-08,19;UBERON:0005631,9.11e-08,3;UBERON:0000478,9.11e-08,3;UBERON:0000158,9.11e-08,3;UBERON:0000358,1.64e-07,3;UBERON:0000307,1.64e-07,3;UBERON:0007010,1.64e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0.0992909512008853,0,0,0,0,0,0,0,0,0,1.90509202037889,2.46025915033828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0.122490799214954,0.287536413054709,0,0,1.40456071893706,0.768032666281217,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,2.58127163094416,0,0,0.649776417447669,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,2.62622923353838,0,0,0.520455980298408,0.913396434936424,0.461230994512117,1.05505848386836,0.587943535678524,0.376999773989026,4.94389935468748,0,0,0.485300549842228,0,0,0,0.292780797011547,0.209446706813455,0.510914110417183,0,0,0,0,0.457500602818626,0,0.173824320192276,0.255715457330331,1.24672826735736,0.973447578406546,0.305518091550949,0,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0,0,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0,0.411564272815887,0.398068533636986,0,0,0,1.03562886267751,1.40715635988658,0,0.23674473558521,0,0,0,0.268273401399619,0.350296027101508,0.329119699826961,0,0.972825714550269,0.292399974850665,0,0.402619256281115,0.210289948564127,0,0.330418782983798,0,0.213288250535234,0.232236671860439,0.38660238396628,0,0.444756087689741,0.380451252225118,0,0.329397909448022,0.502670417600539,0.596869416123452,0.38992817423824,1.79763881730844,0,0,0,0.685491075658373,0,1.4255592949172,1.35766741017338,3.0158402552837,7.01925562079256,15.941895981797,6.90794402502049,9.00799296629144,0.592905254174298,7.84171996865642,7.07612382407531,4.27238013531222,4.66578279193557,3.37648023653384,4.07401362850272,4.02774592431135,1.29708181420028,1.37280706594041,1.43768206527355,2.97712758134803,3.74445207737473,2.27320990152401,0.538192240565737,1.4473305640901,0,0.189491411770485,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0.325773918707152,0,0,0.485561272309963,0,0.188605079755898,0.885905678642318,0.307435147943927,0.258428293168221,0,0,0,0,1.03135543248187,0,0,0,0,0,0.178368817602071,0,0,8.91752490642099,27.9618333540243,0.220528398054962,0,0.484393280087717,0.0603129249281559,0,0.164140899745061,0.291480836629851,0,0.341741761595705,2.27025554759545,1.48155621895769,1.13021074202815,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0.216010681643603,0.627264888043406,0,0,0.495920734352016,0,0.388844919875379,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0.25984164595559,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,6.88156455459601,3.76798197759798,9.23365390002431,0.579568782096571,0,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.207574695168353,1.99512436700516,0.853668028770671,0.729320151204882,1.04806581313991,0.183843508450014,1.33348036680969,0.412070114477788,0,0.505394423527595,0.760437899670719,0.565879024158229,0.0936415074698824,0.320125762024346,0.402048282689293,0.476293691283074,0.463537303779422,0.192909220463705,0.824171801606613,0.147198920134397,0.685738504770831,0.354951612318675,0.238436189947321,0.290692833264657,0.376437521661322,0.338458431566706,0.365855945745545,0.263069711437843,0.543216455383447,0,0.355905054372522,0.197008964751127,0,0.154936841185966,0.192906610981141,0.499621155875892,0.467863216890817,0.429742108096597,0.191288332068843,0.661774257358546,0 | |||
|short_description=p3@Adra2b | |||
}} |
Latest revision as of 16:29, 25 September 2015
Short description: | p3@Adra2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Adra2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1435 |
Association with transcript: | 16bp_to_ENSMUST00000104934_5end |
EntrezGene: | Adra2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.64e-07 | 3 |
trophoblast cell | 1.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 2.54e-22 | 49 |
abdominal segment element | 2.54e-22 | 49 |
abdominal segment of trunk | 2.54e-22 | 49 |
abdomen | 2.54e-22 | 49 |
liver | 6.25e-18 | 22 |
epithelial sac | 6.25e-18 | 22 |
digestive gland | 6.25e-18 | 22 |
epithelium of foregut-midgut junction | 6.25e-18 | 22 |
anatomical boundary | 6.25e-18 | 22 |
hepatobiliary system | 6.25e-18 | 22 |
foregut-midgut junction | 6.25e-18 | 22 |
hepatic diverticulum | 6.25e-18 | 22 |
liver primordium | 6.25e-18 | 22 |
septum transversum | 6.25e-18 | 22 |
liver bud | 6.25e-18 | 22 |
digestive tract diverticulum | 5.51e-17 | 23 |
sac | 5.51e-17 | 23 |
exocrine gland | 2.53e-15 | 25 |
exocrine system | 2.53e-15 | 25 |
subdivision of trunk | 7.35e-15 | 66 |
mesenchyme | 1.70e-12 | 61 |
entire embryonic mesenchyme | 1.70e-12 | 61 |
trunk region element | 2.24e-12 | 79 |
trunk | 4.68e-10 | 90 |
epithelial tube | 1.69e-08 | 47 |
urinary system structure | 2.23e-08 | 18 |
trunk mesenchyme | 6.34e-08 | 45 |
renal system | 7.72e-08 | 19 |
extraembryonic membrane | 9.11e-08 | 3 |
extraembryonic structure | 9.11e-08 | 3 |
membranous layer | 9.11e-08 | 3 |
blastocyst | 1.64e-07 | 3 |
blastula | 1.64e-07 | 3 |
cleaving embryo | 1.64e-07 | 3 |