FFCP PHASE1:Mm9::chr16:62814664..62814685,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (6 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68159 | |EntrezGene=68159 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1152 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R1Q0 | |UniProt=Q8R1Q0 | ||
|association_with_transcript=162bp_to_ENSMUST00000055557,NM_026588,uc007zpv.1_5end | |association_with_transcript=162bp_to_ENSMUST00000055557,NM_026588,uc007zpv.1_5end | ||
|cluster_id=chr16:62814664..62814685,+ | |||
|description=CAGE_peak_2_at_Stx19_5end | |description=CAGE_peak_2_at_Stx19_5end | ||
|id=chr16:62814664..62814685,+ | |id=chr16:62814664..62814685,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!7.46e-18!17;UBERON:0002048!2.87e-17!14;UBERON:0000117!2.87e-17!14;UBERON:0000171!2.87e-17!14;UBERON:0000170!2.87e-17!14;UBERON:0005597!2.87e-17!14;UBERON:0000118!2.87e-17!14;UBERON:0005178!2.23e-13!17;UBERON:0005181!2.23e-13!17;UBERON:0002224!2.23e-13!17;UBERON:0000915!2.23e-13!17;UBERON:0008947!2.23e-13!17;UBERON:0003258!2.23e-13!17;UBERON:0005157!2.87e-09!27;UBERON:0000077!3.93e-08!97;UBERON:0000945!4.34e-08!16;UBERON:0010039!4.34e-08!16;UBERON:0000310!1.09e-07!6;UBERON:0001443!1.09e-07!6;UBERON:0001041!1.10e-07!92;UBERON:0004921!9.80e-07!126;UBERON:0004185!9.80e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,5.60e-33,14;UBERON:0000117,5.60e-33,14;UBERON:0000171,5.60e-33,14;UBERON:0000170,5.60e-33,14;UBERON:0005597,5.60e-33,14;UBERON:0000118,5.60e-33,14;UBERON:0005153,7.19e-32,17;UBERON:0005178,7.43e-27,17;UBERON:0005181,7.43e-27,17;UBERON:0002224,7.43e-27,17;UBERON:0000915,7.43e-27,17;UBERON:0008947,7.43e-27,17;UBERON:0003258,7.43e-27,17;UBERON:0005157,8.46e-27,20;UBERON:0001041,2.21e-17,80;UBERON:0000945,6.20e-16,16;UBERON:0010039,6.20e-16,16;UBERON:0004921,1.07e-12,114;UBERON:0001007,2.03e-12,116;UBERON:0001555,2.03e-12,116;UBERON:0007026,2.03e-12,116;UBERON:0004119,3.76e-12,118;UBERON:0000925,3.76e-12,118;UBERON:0006595,3.76e-12,118;UBERON:0001004,1.05e-11,42;UBERON:0000065,4.35e-10,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0.744281895337007,0,0,0,0,2.95605104266567,0.37898282354097,0.814824882210129,1.35796068620151,0.938760993154008,3.85264392116176,5.71304738126433,7.21994497073856,3.4679731703362,3.32197034473162,2.07291199254733,4.09658286789345,3.28101465545202,6.219909519005,0,0,1.96705709207614,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0.971122544619926,0,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0.712994756769443,0,0,0,0,0,0,0,0.354680467284547,0.178368817602071,0,0,0,0,0,0.49465875882444,0.484393280087717,0.241251699712623,0.477489376012546,0.492422699235184,0,0,0,0.206386867963223,0,0,0,0,0,0,0,23.8667654503778,0.632671987162271,2.43983360552218,4.32021363287205,4.59994251231831,5.67742665740062,5.52943820177765,7.93473174963225,16.4906243449939,0.129614973291793,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.906921534460845,0,0,0,0.386379188064381,0,0,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0,0.412070114477788,0,0,0.760437899670719,0.377252682772152,0.0936415074698824,0.128050304809739,0.287177344778066,0.476293691283074,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.507687647350059,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0,0,0.309873682371932,0.385813221962283,0,0.467863216890817,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0.744281895337007,0,0,0,0,2.95605104266567,0.37898282354097,0.814824882210129,1.35796068620151,0.938760993154008,3.85264392116176,5.71304738126433,7.21994497073856,3.4679731703362,3.32197034473162,2.07291199254733,4.09658286789345,3.28101465545202,6.219909519005,0,0,1.96705709207614,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0.971122544619926,0,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0.712994756769443,0,0,0,0,0,0,0,0.354680467284547,0.178368817602071,0,0,0,0,0,0.49465875882444,0.484393280087717,0.241251699712623,0.477489376012546,0.492422699235184,0,0,0,0.206386867963223,0,0,0,0,0,0,0,23.8667654503778,0.632671987162271,2.43983360552218,4.32021363287205,4.59994251231831,5.67742665740062,5.52943820177765,7.93473174963225,16.4906243449939,0.129614973291793,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.906921534460845,0,0,0,0.386379188064381,0,0,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0,0.412070114477788,0,0,0.760437899670719,0.377252682772152,0.0936415074698824,0.128050304809739,0.287177344778066,0.476293691283074,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.507687647350059,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0,0,0.309873682371932,0.385813221962283,0,0.467863216890817,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p2@Stx19 | |short_description=p2@Stx19 | ||
}} | }} | ||
Latest revision as of 17:03, 25 September 2015
| Short description: | p2@Stx19 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Stx19_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1152 |
| Association with transcript: | 162bp_to_ENSMUST00000055557, NM_026588, uc007zpv.1_5end |
| EntrezGene: | Stx19 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lung | 5.60e-33 | 14 |
| respiratory tube | 5.60e-33 | 14 |
| respiration organ | 5.60e-33 | 14 |
| pair of lungs | 5.60e-33 | 14 |
| lung primordium | 5.60e-33 | 14 |
| lung bud | 5.60e-33 | 14 |
| epithelial bud | 7.19e-32 | 17 |
| thoracic cavity element | 7.43e-27 | 17 |
| thoracic segment organ | 7.43e-27 | 17 |
| thoracic cavity | 7.43e-27 | 17 |
| thoracic segment of trunk | 7.43e-27 | 17 |
| respiratory primordium | 7.43e-27 | 17 |
| endoderm of foregut | 7.43e-27 | 17 |
| epithelial fold | 8.46e-27 | 20 |
| foregut | 2.21e-17 | 80 |
| stomach | 6.20e-16 | 16 |
| food storage organ | 6.20e-16 | 16 |
| subdivision of digestive tract | 1.07e-12 | 114 |
| digestive system | 2.03e-12 | 116 |
| digestive tract | 2.03e-12 | 116 |
| primitive gut | 2.03e-12 | 116 |
| endoderm-derived structure | 3.76e-12 | 118 |
| endoderm | 3.76e-12 | 118 |
| presumptive endoderm | 3.76e-12 | 118 |
| respiratory system | 1.05e-11 | 42 |
| respiratory tract | 4.35e-10 | 41 |