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FFCP PHASE1:Mm9::chr10:126516096..126516125,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr10:126516096..126516125,+
|DHSsupport=NA
|short_description=p2@Agap2
|DPIdataset=NA
|description=CAGE_peak_2_at_Agap2_5end
|association_with_transcript=133bp_to_ENSMUST00000039259,ENSMUST00000105254,NM_001033263,uc007hhx.1,uc007hhy.1_5end
|EntrezGene=216439
|EntrezGene=216439
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q3UHD9
|UniProt=Q3UHD9
|association_with_transcript=133bp_to_ENSMUST00000039259,ENSMUST00000105254,NM_001033263,uc007hhx.1,uc007hhy.1_5end
|cluster_id=chr10:126516096..126516125,+
|description=CAGE_peak_2_at_Agap2_5end
|id=chr10:126516096..126516125,+
|ontology_enrichment_celltype=CL:0000117!4.86e-13!23;CL:0000337!4.86e-13!23;CL:0000540!2.40e-09!33;CL:0000047!2.40e-09!33;CL:0000031!2.40e-09!33;CL:0000404!2.40e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,4.09e-16,23;CL:0000337,4.09e-16,23;CL:0000540,1.00e-09,33;CL:0000047,1.00e-09,33;CL:0000031,1.00e-09,33;CL:0000404,1.00e-09,33;CL:0002319,3.67e-07,43;CL:0000393,7.37e-07,39;CL:0000211,7.37e-07,39;CL:0000221,8.58e-07,44;CL:0000133,8.58e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!4.16e-21!52;UBERON:0005068!4.16e-21!52;UBERON:0006241!4.16e-21!52;UBERON:0007135!4.16e-21!52;UBERON:0001017!4.29e-21!73;UBERON:0005743!4.29e-21!73;UBERON:0002346!5.70e-20!71;UBERON:0003075!5.70e-20!71;UBERON:0007284!5.70e-20!71;UBERON:0000955!9.96e-20!50;UBERON:0006238!9.96e-20!50;UBERON:0000073!1.59e-19!75;UBERON:0001016!1.59e-19!75;UBERON:0000033!1.96e-19!63;UBERON:0002616!5.28e-19!49;UBERON:0002020!2.42e-17!34;UBERON:0003056!6.35e-17!49;UBERON:0004121!8.34e-17!102;UBERON:0000924!8.34e-17!102;UBERON:0006601!8.34e-17!102;UBERON:0003080!2.83e-16!40;UBERON:0002780!9.81e-16!39;UBERON:0001890!9.81e-16!39;UBERON:0006240!9.81e-16!39;UBERON:0002791!3.68e-14!29;UBERON:0003528!3.68e-14!29;UBERON:0001893!3.68e-14!29;UBERON:0000956!1.18e-09!21;UBERON:0001869!1.18e-09!21;UBERON:0000203!1.18e-09!21;UBERON:0007811!2.16e-09!86;UBERON:0000153!1.09e-08!94;UBERON:0002619!3.18e-08!17;UBERON:0002021!3.67e-08!10;UBERON:0000411!3.67e-08!10;UBERON:0001950!3.67e-08!10;UBERON:0000468!1.96e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.41e-28,54;UBERON:0001049,4.80e-27,52;UBERON:0005068,4.80e-27,52;UBERON:0006241,4.80e-27,52;UBERON:0007135,4.80e-27,52;UBERON:0001017,1.36e-25,73;UBERON:0002346,2.46e-25,64;UBERON:0003075,2.46e-25,64;UBERON:0007284,2.46e-25,64;UBERON:0001016,2.94e-24,75;UBERON:0000955,4.00e-23,47;UBERON:0006238,4.00e-23,47;UBERON:0002020,2.10e-22,34;UBERON:0002616,3.24e-22,46;UBERON:0003056,4.89e-21,49;UBERON:0003080,1.62e-20,40;UBERON:0004121,2.38e-20,95;UBERON:0000924,2.38e-20,95;UBERON:0006601,2.38e-20,95;UBERON:0010371,3.40e-20,73;UBERON:0002780,7.90e-20,39;UBERON:0001890,7.90e-20,39;UBERON:0006240,7.90e-20,39;UBERON:0003528,2.47e-18,29;UBERON:0002791,2.47e-18,29;UBERON:0001893,2.47e-18,29;UBERON:0010314,6.87e-17,92;UBERON:0000956,1.43e-12,21;UBERON:0001869,1.43e-12,21;UBERON:0000203,1.43e-12,21;UBERON:0002619,9.10e-11,17;UBERON:0002021,6.22e-10,10;UBERON:0000411,6.22e-10,10;UBERON:0001950,6.22e-10,10;UBERON:0000025,4.75e-07,114;UBERON:0002420,4.90e-07,8;UBERON:0007245,4.90e-07,8;UBERON:0010009,4.90e-07,8;UBERON:0010011,4.90e-07,8;UBERON:0000454,4.90e-07,8;UBERON:0003076,5.08e-07,12;UBERON:0003057,5.08e-07,12
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20816018102809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.734187008646726,2.34717403304412,0,0,0,0,0,0,0,0,0,0,0,44.9142543108307,56.6020347821075,43.7343668419264,0.338844532069132,0,0,0.988866362566974,0.7104801149461,1.79760066311043,3.84218305321555,2.28117147078651,6.21027316325777,4.6271491497304,41.9906947073591,48.3702104684034,7.22695715368229,6.51749202924007,9.19218786610021,8.8092704799511,19.1531007127782,15.3606533256243,45.1051104037263,56.8138266770964,49.4867702028922,5.58365998002762,10.1297269805702,15.7382195210114,67.7645746589436,52.3927785340699,40.0758808524396,0,0,0.289864488701678,0,0,0.539703191637817,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,1.25602267690966,0,3.71105347662062,0.520455980298408,0.608930956624282,0.922461989024234,0.904335843315735,1.05829836422134,0.753999547978053,0,2.02439099687876,0,0.161766849947409,1.10420759230197,0,0,7.61230072230023,26.8091784721222,0.510914110417183,0,0,0,10.7849260371472,65.4225862030636,42.7224797183739,70.398849677872,61.6274252166097,21.1943805450751,34.5573890334324,1.73126918545538,1.11966273549084,0.252722758433675,1.05220927943237,1.04096354370163,0.229902104433473,1.26043490863744,1.35634336052144,1.97305847538851,4.35586648968489,3.74806898238915,5.17406741478031,0,0.756424320671277,1.05570674498369,1.7535658594206,0.834141747676794,0.348252166522167,0.205782136407943,1.99034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.308534225774757,0.465067889500816,0.804820204198858,1.5179494507732,0,0.985004784474571,4.86412857275134,3.65499968563331,1.75640092232841,4.69722465661301,119.865270681553,25.0058208081661,0.330418782983798,0.528901133327089,0.213288250535234,1.39342003116263,0.38660238396628,0.403367049246685,0.889512175379481,0.380451252225118,0,0.164698954724011,0.754005626400808,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0.796565093017469,0.189667900953082,0.456994050438915,2.25415471346161,0.814605311381257,0.193952487167626,0.631222379012867,0.822074982615345,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0.938760993154008,0.167506257441816,0,1.36593553500459,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,5.9403718295483,5.39173758324135,0.163934945376675,2.27223834483936,0,0,0.646270193198397,0.238968797952552,0.445597348164788,0.283076530788832,0.809621403349789,0.292255857911312,1.58115111178609,108.606604950571,0.99358059645788,5.34196811001766,3.25773918707152,5.60898418106621,0,1.94224508923985,1.51161778482376,0.754420319023592,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,1.08036656418786,1.81102157295856,2.14337035031592,5.32020700926821,1.78368817602071,1.81003922662333,1.8267896946876,0.23467170806371,0,0.220528398054962,0.16488625294148,0.484393280087717,0.0603129249281559,0.119372344003136,0,1.7488850197791,7.97328798645192,0.170870880797853,0,0,0.376736914009382,0.136694227721025,0.228778173206523,0,0,0,2.86401185404534,0.949007980743406,1.42323626988794,0.648032044930808,0.418176592028937,0.655087691238533,0.809186078308924,0.661227645802687,0.26175594198403,0.518459893167171,0,0,0.299033092087958,0.330916980914195,0.777804753376191,1.16243841129958,1.01373675294467,1.5256441023948,3.1249052362548,1.46803082195995,0.724752362478018,0.576060012515731,0,0.810900861160657,0.410843828659309,0,0,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0.228620419965,0.403304740547362,0,0.288635524920988,0.116876902181569,1.13365191807606,0,0,0,0.386379188064381,0.750729901804728,3.47988086107804,0.428736758158132,0,152.482997506608,135.795944769617,154.681788628637,193.85038968368,54.8066015816514,55.8991484068378,76.2775425261941,55.8398291998033,47.1268105343573,47.6339486811674,0.518936737920883,5.58634822761443,4.09760653809922,6.32077464377565,8.80375283037526,9.37601893095072,5.55616819504038,7.2112270033613,6.09746498224449,5.55933865880354,7.85785829659743,7.35642731405697,5.61849044819294,7.04276676453562,6.14559517825062,7.62069906052918,5.09891034157364,3.8581844092741,4.94503080963968,3.09117732282234,6.85738504770831,7.0990322463735,5.00715998889374,3.92435324907287,6.21121910741182,5.58456412085065,5.48783918618318,3.15683653725411,5.70377278152619,5.05028044491965,4.98267076121531,4.0386837773981,3.6830793885272,6.35241048862461,6.94463799532109,14.4890135204009,5.38042699424439,4.29742108096597,5.92993829413414,2.20591419119516,0.695603506861264
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20816018102809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.734187008646726,2.34717403304412,0,0,0,0,0,0,0,0,0,0,0,44.9142543108307,56.6020347821075,43.7343668419264,0.338844532069132,0,0,0.988866362566974,0.7104801149461,1.79760066311043,3.84218305321555,2.28117147078651,6.21027316325777,4.6271491497304,41.9906947073591,48.3702104684034,7.22695715368229,6.51749202924007,9.19218786610021,8.8092704799511,19.1531007127782,15.3606533256243,45.1051104037263,56.8138266770964,49.4867702028922,5.58365998002762,10.1297269805702,15.7382195210114,67.7645746589436,52.3927785340699,40.0758808524396,0,0,0.289864488701678,0,0,0.539703191637817,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,1.25602267690966,0,3.71105347662062,0.520455980298408,0.608930956624282,0.922461989024234,0.904335843315735,1.05829836422134,0.753999547978053,0,2.02439099687876,0,0.161766849947409,1.10420759230197,0,0,7.61230072230023,26.8091784721222,0.510914110417183,0,0,0,10.7849260371472,65.4225862030636,42.7224797183739,70.398849677872,61.6274252166097,21.1943805450751,34.5573890334324,1.73126918545538,1.11966273549084,0.252722758433675,1.05220927943237,1.04096354370163,0.229902104433473,1.26043490863744,1.35634336052144,1.97305847538851,4.35586648968489,3.74806898238915,5.17406741478031,0,0.756424320671277,1.05570674498369,1.7535658594206,0.834141747676794,0.348252166522167,0.205782136407943,1.99034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.308534225774757,0.465067889500816,0.804820204198858,1.5179494507732,0,0.985004784474571,4.86412857275134,3.65499968563331,1.75640092232841,4.69722465661301,119.865270681553,25.0058208081661,0.330418782983798,0.528901133327089,0.213288250535234,1.39342003116263,0.38660238396628,0.403367049246685,0.889512175379481,0.380451252225118,0,0.164698954724011,0.754005626400808,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0.796565093017469,0.189667900953082,0.456994050438915,2.25415471346161,0.814605311381257,0.193952487167626,0.631222379012867,0.822074982615345,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0.938760993154008,0.167506257441816,0,1.36593553500459,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,5.9403718295483,5.39173758324135,0.163934945376675,2.27223834483936,0,0,0.646270193198397,0.238968797952552,0.445597348164788,0.283076530788832,0.809621403349789,0.292255857911312,1.58115111178609,108.606604950571,0.99358059645788,5.34196811001766,3.25773918707152,5.60898418106621,0,1.94224508923985,1.51161778482376,0.754420319023592,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,1.08036656418786,1.81102157295856,2.14337035031592,5.32020700926821,1.78368817602071,1.81003922662333,1.8267896946876,0.23467170806371,0,0.220528398054962,0.16488625294148,0.484393280087717,0.0603129249281559,0.119372344003136,0,1.7488850197791,7.97328798645192,0.170870880797853,0,0,0.376736914009382,0.136694227721025,0.228778173206523,0,0,0,2.86401185404534,0.949007980743406,1.42323626988794,0.648032044930808,0.418176592028937,0.655087691238533,0.809186078308924,0.661227645802687,0.26175594198403,0.518459893167171,0,0,0.299033092087958,0.330916980914195,0.777804753376191,1.16243841129958,1.01373675294467,1.5256441023948,3.1249052362548,1.46803082195995,0.724752362478018,0.576060012515731,0,0.810900861160657,0.410843828659309,0,0,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0.228620419965,0.403304740547362,0,0.288635524920988,0.116876902181569,1.13365191807606,0,0,0,0.386379188064381,0.750729901804728,3.47988086107804,0.428736758158132,0,152.482997506608,135.795944769617,154.681788628637,193.85038968368,54.8066015816514,55.8991484068378,76.2775425261941,55.8398291998033,47.1268105343573,47.6339486811674,0.518936737920883,5.58634822761443,4.09760653809922,6.32077464377565,8.80375283037526,9.37601893095072,5.55616819504038,7.2112270033613,6.09746498224449,5.55933865880354,7.85785829659743,7.35642731405697,5.61849044819294,7.04276676453562,6.14559517825062,7.62069906052918,5.09891034157364,3.8581844092741,4.94503080963968,3.09117732282234,6.85738504770831,7.0990322463735,5.00715998889374,3.92435324907287,6.21121910741182,5.58456412085065,5.48783918618318,3.15683653725411,5.70377278152619,5.05028044491965,4.98267076121531,4.0386837773981,3.6830793885272,6.35241048862461,6.94463799532109,14.4890135204009,5.38042699424439,4.29742108096597,5.92993829413414,2.20591419119516,0.695603506861264
|short_description=p2@Agap2
}}
}}

Latest revision as of 17:17, 25 September 2015

Short description:p2@Agap2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Agap2_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 133bp_to_ENSMUST00000039259, ENSMUST00000105254, NM_001033263, uc007hhx.1, uc007hhy.1_5end
EntrezGene:Agap2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Agap2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C344.91
Mouse Granule cells, donor2.CNhs12357.11731-123E356.60
Mouse Granule cells, donor3.CNhs12108.11636-122C743.73
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.21
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F141.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D548.37
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.23
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.52
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.36
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D445.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F456.81
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D849.49
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D667.76
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F652.39
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E140.08
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.71
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I226.81
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.78
corpus striatum, adult.CNhs10487.19-21D865.42
corpus striatum, neonate N00.CNhs11226.630-43F142.72
cortex, adult.CNhs10473.12-14D570.40
cortex, neonate N30.CNhs11107.1392-42F261.63
diencephalon, adult.CNhs10482.20-12F221.19
diencephalon, neonate N30.CNhs11201.1388-42B234.56
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E74.36
eyeball, neonate N02.CNhs11205.1551-44G83.75
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G14.86
heart, neonate N20.CNhs11127.821-26I63.65
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D24.70
hippocampus, adult.CNhs10478.13-16E8119.87
hippocampus, neonate N00.CNhs11228.627-43G125.01
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.94
medulla oblongata, neonate N30.CNhs11200.1396-42A35.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I9108.61
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I43.26
oviduct, adult pregnant day01.CNhs10500.988-6G65.61
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B95.32
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C97.97
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1152.48
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2135.80
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3154.68
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7193.85
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A454.81
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A555.90
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A676.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A755.84
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A847.13
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A947.63
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H24.10
whole body, embryo E14.5.CNhs10578.420-27D26.32
whole body, embryo E14.CNhs10519.395-14B18.80
whole body, embryo E16.CNhs10514.453-14F29.38
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.04
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.35
whole body, embryo E17.5.CNhs10513.490-9F96.94
whole body, embryo E17.CNhs10517.475-3I514.49
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C65.93
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.09e-1623
neuroblast (sensu Vertebrata)4.09e-1623
neuron1.00e-0933
neuronal stem cell1.00e-0933
neuroblast1.00e-0933
electrically signaling cell1.00e-0933
neural cell3.67e-0743
electrically responsive cell7.37e-0739
electrically active cell7.37e-0739
ectodermal cell8.58e-0744
neurectodermal cell8.58e-0744

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.41e-2854
neural tube4.80e-2752
neural rod4.80e-2752
future spinal cord4.80e-2752
neural keel4.80e-2752
central nervous system1.36e-2573
neurectoderm2.46e-2564
neural plate2.46e-2564
presumptive neural plate2.46e-2564
nervous system2.94e-2475
brain4.00e-2347
future brain4.00e-2347
gray matter2.10e-2234
regional part of brain3.24e-2246
pre-chordal neural plate4.89e-2149
anterior neural tube1.62e-2040
ectoderm-derived structure2.38e-2095
ectoderm2.38e-2095
presumptive ectoderm2.38e-2095
ecto-epithelium3.40e-2073
regional part of forebrain7.90e-2039
forebrain7.90e-2039
future forebrain7.90e-2039
brain grey matter2.47e-1829
regional part of telencephalon2.47e-1829
telencephalon2.47e-1829
structure with developmental contribution from neural crest6.87e-1792
cerebral cortex1.43e-1221
cerebral hemisphere1.43e-1221
pallium1.43e-1221
regional part of cerebral cortex9.10e-1117
occipital lobe6.22e-1010
visual cortex6.22e-1010
neocortex6.22e-1010
tube4.75e-07114
basal ganglion4.90e-078
nuclear complex of neuraxis4.90e-078
aggregate regional part of brain4.90e-078
collection of basal ganglia4.90e-078
cerebral subcortex4.90e-078
posterior neural tube5.08e-0712
chordal neural plate5.08e-0712
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