FFCP PHASE1:Mm9::chr5:145726765..145726778,-: Difference between revisions
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{{FFCP|EntrezGene=75788|HGNC=|MCL_coexpression_id=60|UniProt=Q9CUN6,E9Q4K9|association_with_transcript=-49bp_to_ENSMUST00000085684,ENSMUST00000100461_5end|description=CAGE_peak_2_at_Smurf1_5end|id=chr5:145726765..145726778,-|ontology_enrichment_celltype=CL:0000117!6.30e-11!23;CL:0000337!6.30e-11!23;CL:0002319!3.39e-10!43;CL:0000221!4.74e-10!44;CL:0000133!4.74e-10!44;CL:0000540!2.93e-09!33;CL:0000047!2.93e-09!33;CL:0000031!2.93e-09!33;CL:0000404!2.93e-09!33;CL:0000055!3.75e-09!50;CL:0000393!9.74e-09!39;CL:0000211!9.74e-09!39;CL:0002321!4.26e-08!70;CL:0000220!4.26e-08!70|ontology_enrichment_celltype_v019_2=CL:0000117,1.81e-12,23;CL:0000337,1.81e-12,23;CL:0002319,1.08e-10,43;CL:0000221,2.56e-10,44;CL:0000133,2.56e-10,44;CL:0000540,8.46e-10,33;CL:0000047,8.46e-10,33;CL:0000031,8.46e-10,33;CL:0000404,8.46e-10,33;CL:0002321,6.15e-09,70;CL:0000393,1.35e-07,39;CL:0000211,1.35e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.55e-19!75;UBERON:0001016!2.55e-19!75;UBERON:0001017!3.20e-18!73;UBERON:0005743!3.20e-18!73;UBERON:0004121!6.40e-17!102;UBERON:0000924!6.40e-17!102;UBERON:0006601!6.40e-17!102;UBERON:0001049!2.09e-16!52;UBERON:0005068!2.09e-16!52;UBERON:0006241!2.09e-16!52;UBERON:0007135!2.09e-16!52;UBERON:0002346!4.25e-15!71;UBERON:0003075!4.25e-15!71;UBERON:0007284!4.25e-15!71;UBERON:0000955!2.01e-14!50;UBERON:0006238!2.01e-14!50;UBERON:0002020!2.31e-14!34;UBERON:0002616!2.62e-14!49;UBERON:0003080!1.23e-12!40;UBERON:0002780!3.47e-12!39;UBERON:0001890!3.47e-12!39;UBERON:0006240!3.47e-12!39;UBERON:0003056!3.59e-12!49;UBERON:0000033!8.03e-12!63;UBERON:0002791!2.72e-11!29;UBERON:0003528!2.72e-11!29;UBERON:0001893!2.72e-11!29;UBERON:0000956!8.30e-09!21;UBERON:0001869!8.30e-09!21;UBERON:0000203!8.30e-09!21;UBERON:0002619!4.93e-08!17;UBERON:0000153!1.56e-07!94;UBERON:0007811!3.60e-07!86;UBERON:0002021!9.12e-07!10;UBERON:0000411!9.12e-07!10;UBERON:0001950!9.12e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.34e-21,75;UBERON:0001017,1.20e-19,73;UBERON:0000073,1.42e-18,54;UBERON:0001049,8.83e-18,52;UBERON:0005068,8.83e-18,52;UBERON:0006241,8.83e-18,52;UBERON:0007135,8.83e-18,52;UBERON:0004121,1.16e-16,95;UBERON:0000924,1.16e-16,95;UBERON:0006601,1.16e-16,95;UBERON:0002020,4.36e-16,34;UBERON:0002346,5.94e-15,64;UBERON:0003075,5.94e-15,64;UBERON:0007284,5.94e-15,64;UBERON:0010371,4.78e-12,73;UBERON:0002616,8.99e-12,46;UBERON:0003080,9.21e-12,40;UBERON:0000955,2.19e-11,47;UBERON:0006238,2.19e-11,47;UBERON:0002780,5.69e-11,39;UBERON:0001890,5.69e-11,39;UBERON:0006240,5.69e-11,39;UBERON:0003528,1.85e-10,29;UBERON:0002791,1.85e-10,29;UBERON:0001893,1.85e-10,29;UBERON:0003056,2.07e-10,49;UBERON:0002021,5.71e-10,10;UBERON:0000411,5.71e-10,10;UBERON:0001950,5.71e-10,10;UBERON:0002619,1.91e-09,17;UBERON:0002240,2.05e-09,6;UBERON:0005174,2.05e-09,6;UBERON:0001137,2.05e-09,6;UBERON:0001948,1.41e-08,5;UBERON:0002315,1.41e-08,5;UBERON:0000956,1.74e-08,21;UBERON:0001869,1.74e-08,21;UBERON:0000203,1.74e-08,21;UBERON:0010314,7.18e-08,92;UBERON:0003076,3.86e-07,12;UBERON:0003057,3.86e-07,12|phase1_expression=0,0.348975407639361,0.454999239389536,0,1.00179145989269,0.503637815735669,0.467225281191051,0.129123323441576,0.140788722151667,0.936258105287974,0.171217968225505,0,0.513602189793617,0.262261207256992,0,0.202475267389826,0,0,0,0,1.53077922271926,0.0992909512008853,0,0,0.45881856213434,0.57423196411502,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0.588231488031014,0.683045484958446,0.485510353031154,0.125896817975577,0.506884656097573,0.734187008646726,1.56478268869608,0.872100625521786,0.439372365468944,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0.336093799142464,0.771778308107841,0.286533439938757,0.515672092277442,1.61853168687678,2.11596391708813,1.26766280701236,0.677689064138264,1.77858959222228,0,0,0,0.898800331555214,0,0.829516898467821,0.810035629990144,1.47227472945967,3.71346279724945,2.20868540951614,0.979926393719632,0.958454710182364,1.83843757322004,2.20231761998777,0.766124028511126,1.68967186581868,3.29715719325485,3.20206752608434,2.08365348222704,0.558365998002762,0.56276261003168,0.61119299110724,4.12480019663135,2.27794689278565,1.4911955666024,1.51452386666368,1.73814588245607,0.289864488701678,0,1.3599426674155,0.539703191637817,0,0.448026887097336,0.280888840263504,0,0,0,0.422530259330042,0,0,7.11066703153331,2.16491041011214,1.77351905832569,1.01104889002957,0.45673551887624,0,0.148442139064825,0.346970653532272,0.304465478312141,0.691846491768175,0.301445281105245,0.705532242814229,0.502666365318702,0.988779870937496,0.578397427679647,0,0.161766849947409,0,0,1.86391761218122,0.292780797011547,0.41889341362691,0,0.11981512450592,0,0.127070227073065,1.3481157546434,1.37250180845588,0.879580464790051,0.521472960576829,0.255715457330331,1.66230435647648,1.1356888414743,0.712875546952214,0.248813941220186,0.252722758433675,0.631325567659422,0.260240885925407,0,0.720248519221397,0,0.95251098811859,0.7686823217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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75788 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CUN6,E9Q4K9 | |||
|association_with_transcript=-49bp_to_ENSMUST00000085684,ENSMUST00000100461_5end | |||
|cluster_id=chr5:145726765..145726778,- | |||
|description=CAGE_peak_2_at_Smurf1_5end | |||
|id=chr5:145726765..145726778,- | |||
|ontology_enrichment_celltype=CL:0000117!6.30e-11!23;CL:0000337!6.30e-11!23;CL:0002319!3.39e-10!43;CL:0000221!4.74e-10!44;CL:0000133!4.74e-10!44;CL:0000540!2.93e-09!33;CL:0000047!2.93e-09!33;CL:0000031!2.93e-09!33;CL:0000404!2.93e-09!33;CL:0000055!3.75e-09!50;CL:0000393!9.74e-09!39;CL:0000211!9.74e-09!39;CL:0002321!4.26e-08!70;CL:0000220!4.26e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.81e-12,23;CL:0000337,1.81e-12,23;CL:0002319,1.08e-10,43;CL:0000221,2.56e-10,44;CL:0000133,2.56e-10,44;CL:0000540,8.46e-10,33;CL:0000047,8.46e-10,33;CL:0000031,8.46e-10,33;CL:0000404,8.46e-10,33;CL:0002321,6.15e-09,70;CL:0000393,1.35e-07,39;CL:0000211,1.35e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.55e-19!75;UBERON:0001016!2.55e-19!75;UBERON:0001017!3.20e-18!73;UBERON:0005743!3.20e-18!73;UBERON:0004121!6.40e-17!102;UBERON:0000924!6.40e-17!102;UBERON:0006601!6.40e-17!102;UBERON:0001049!2.09e-16!52;UBERON:0005068!2.09e-16!52;UBERON:0006241!2.09e-16!52;UBERON:0007135!2.09e-16!52;UBERON:0002346!4.25e-15!71;UBERON:0003075!4.25e-15!71;UBERON:0007284!4.25e-15!71;UBERON:0000955!2.01e-14!50;UBERON:0006238!2.01e-14!50;UBERON:0002020!2.31e-14!34;UBERON:0002616!2.62e-14!49;UBERON:0003080!1.23e-12!40;UBERON:0002780!3.47e-12!39;UBERON:0001890!3.47e-12!39;UBERON:0006240!3.47e-12!39;UBERON:0003056!3.59e-12!49;UBERON:0000033!8.03e-12!63;UBERON:0002791!2.72e-11!29;UBERON:0003528!2.72e-11!29;UBERON:0001893!2.72e-11!29;UBERON:0000956!8.30e-09!21;UBERON:0001869!8.30e-09!21;UBERON:0000203!8.30e-09!21;UBERON:0002619!4.93e-08!17;UBERON:0000153!1.56e-07!94;UBERON:0007811!3.60e-07!86;UBERON:0002021!9.12e-07!10;UBERON:0000411!9.12e-07!10;UBERON:0001950!9.12e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.34e-21,75;UBERON:0001017,1.20e-19,73;UBERON:0000073,1.42e-18,54;UBERON:0001049,8.83e-18,52;UBERON:0005068,8.83e-18,52;UBERON:0006241,8.83e-18,52;UBERON:0007135,8.83e-18,52;UBERON:0004121,1.16e-16,95;UBERON:0000924,1.16e-16,95;UBERON:0006601,1.16e-16,95;UBERON:0002020,4.36e-16,34;UBERON:0002346,5.94e-15,64;UBERON:0003075,5.94e-15,64;UBERON:0007284,5.94e-15,64;UBERON:0010371,4.78e-12,73;UBERON:0002616,8.99e-12,46;UBERON:0003080,9.21e-12,40;UBERON:0000955,2.19e-11,47;UBERON:0006238,2.19e-11,47;UBERON:0002780,5.69e-11,39;UBERON:0001890,5.69e-11,39;UBERON:0006240,5.69e-11,39;UBERON:0003528,1.85e-10,29;UBERON:0002791,1.85e-10,29;UBERON:0001893,1.85e-10,29;UBERON:0003056,2.07e-10,49;UBERON:0002021,5.71e-10,10;UBERON:0000411,5.71e-10,10;UBERON:0001950,5.71e-10,10;UBERON:0002619,1.91e-09,17;UBERON:0002240,2.05e-09,6;UBERON:0005174,2.05e-09,6;UBERON:0001137,2.05e-09,6;UBERON:0001948,1.41e-08,5;UBERON:0002315,1.41e-08,5;UBERON:0000956,1.74e-08,21;UBERON:0001869,1.74e-08,21;UBERON:0000203,1.74e-08,21;UBERON:0010314,7.18e-08,92;UBERON:0003076,3.86e-07,12;UBERON:0003057,3.86e-07,12 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,1.00179145989269,0.503637815735669,0.467225281191051,0.129123323441576,0.140788722151667,0.936258105287974,0.171217968225505,0,0.513602189793617,0.262261207256992,0,0.202475267389826,0,0,0,0,1.53077922271926,0.0992909512008853,0,0,0.45881856213434,0.57423196411502,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0.588231488031014,0.683045484958446,0.485510353031154,0.125896817975577,0.506884656097573,0.734187008646726,1.56478268869608,0.872100625521786,0.439372365468944,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0.336093799142464,0.771778308107841,0.286533439938757,0.515672092277442,1.61853168687678,2.11596391708813,1.26766280701236,0.677689064138264,1.77858959222228,0,0,0,0.898800331555214,0,0.829516898467821,0.810035629990144,1.47227472945967,3.71346279724945,2.20868540951614,0.979926393719632,0.958454710182364,1.83843757322004,2.20231761998777,0.766124028511126,1.68967186581868,3.29715719325485,3.20206752608434,2.08365348222704,0.558365998002762,0.56276261003168,0.61119299110724,4.12480019663135,2.27794689278565,1.4911955666024,1.51452386666368,1.73814588245607,0.289864488701678,0,1.3599426674155,0.539703191637817,0,0.448026887097336,0.280888840263504,0,0,0,0.422530259330042,0,0,7.11066703153331,2.16491041011214,1.77351905832569,1.01104889002957,0.45673551887624,0,0.148442139064825,0.346970653532272,0.304465478312141,0.691846491768175,0.301445281105245,0.705532242814229,0.502666365318702,0.988779870937496,0.578397427679647,0,0.161766849947409,0,0,1.86391761218122,0.292780797011547,0.41889341362691,0,0.11981512450592,0,0.127070227073065,1.3481157546434,1.37250180845588,0.879580464790051,0.521472960576829,0.255715457330331,1.66230435647648,1.1356888414743,0.712875546952214,0.248813941220186,0.252722758433675,0.631325567659422,0.260240885925407,0,0.720248519221397,0,0.95251098811859,0.768682321709099,1.03071897015702,1.03481348295606,0.862271971731369,0.378212160335639,1.05570674498369,0.43839146485515,0.278047249225598,1.74126083261083,0.61734640922383,1.39323986772945,0,0,0,0.621377317606506,0.469052119962192,0,0.946978942340841,0,0.154267112887378,0.697601834251224,0.268273401399619,0.583826711835847,0.493679549740441,0.492502392237286,0.162137619091711,0.292399974850665,0.219550115291051,0.268412837520744,1.47202963994889,1.23485534855141,0,0,0.426576501070468,0.928946687441754,0.38660238396628,0.605050573870028,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0,0.948339504765408,0.685491075658373,0,0.203651327845314,0.193952487167626,0.841629838683823,0.252946148497029,0.295220295959204,0.470996183524124,0.246794327843601,0,0,0.196558995113203,0.449724224769707,0,0,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0.482443521363367,0.369506380333209,0.189491411770485,0.488894929326078,0.169745085775188,0.704070744865506,0.335012514883631,0.476087281772027,0.390267295715598,0.630540576424764,0.8858587585951,0.478364305972461,0,0,0.433947175744535,0,0.54390568381871,0,0.275936746304732,0.321101179975584,1.40654023910644,0,0,0.631016438832513,0.390438744296638,0.646270193198397,0.716906393857656,0.891194696329576,1.13230612315533,0,1.75353514746787,0,0.642642632843614,0.141940085208269,0.35613120733451,0.651547837414304,0.164970122972535,0,0.971122544619926,0.604647113929502,0,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0.680879211507576,0.36012218806262,0.388076051348264,0.857348140126369,1.06404140185364,0.356737635204141,0.329098041204242,1.522324745573,0.704015124191131,0.63549621259146,0,0.8244312647074,0.645857706783622,0.603129249281559,0.358117032009409,0.492422699235184,0,1.11255181206306,0,0.619160603889667,0.555583582109135,0,0.136694227721025,0,0.339956859987711,0,0,0,0.949007980743406,0.203319467126849,0.324016022465404,0,0,0.134864346384821,0.247960367176008,0.26175594198403,0.518459893167171,0,11.837551712368,0.897099276263873,0.496375471371293,0.388902376688095,0.387479470433193,0.675824501963113,1.17357238645754,0.651021924219751,1.04859344425711,6.28118714147616,5.18454011264158,0.316011120628178,0.608175645870493,0.513554785824136,0.25984164595559,0.179026695667481,0.39736270956253,0.600977247599844,0,0.201932899896295,0,0,0.292373642219257,0.0962118416403295,0.350630706544707,0,0.443971906748129,0.538283139656854,1.00730769818447,0.386379188064381,0,0.73260649706906,0.214368379079066,0,2.25900737046827,1.84130094602871,2.86447756719698,2.06223818812425,4.7955776383945,0.755393897389701,2.02506750069542,2.70192721934532,0.906284817968409,2.5888015587591,0.518936737920883,1.59609949360412,1.02440163452481,0.243106717068294,0.209613162627982,0.735374033800057,0.666740183404846,0.412070114477788,0,0.505394423527595,0.50695859978048,1.13175804831646,0.468207537349412,0.832326981263301,0.516919220600519,0,0.811190281613988,0.578727661391115,0.824171801606613,0.294397840268795,0.342869252385415,0.5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| |||
|short_description=p2@Smurf1 | |||
}} |
Latest revision as of 17:23, 25 September 2015
Short description: | p2@Smurf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Smurf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -49bp_to_ENSMUST00000085684, ENSMUST00000100461_5end |
EntrezGene: | Smurf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.81e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.81e-12 | 23 |
neural cell | 1.08e-10 | 43 |
ectodermal cell | 2.56e-10 | 44 |
neurectodermal cell | 2.56e-10 | 44 |
neuron | 8.46e-10 | 33 |
neuronal stem cell | 8.46e-10 | 33 |
neuroblast | 8.46e-10 | 33 |
electrically signaling cell | 8.46e-10 | 33 |
embryonic cell | 6.15e-09 | 70 |
electrically responsive cell | 1.35e-07 | 39 |
electrically active cell | 1.35e-07 | 39 |