FFCP PHASE1:Mm9::chr8:73278578..73278650,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr8:73278578..73278650,+ to FFCP PHASE1:Mm9::chr8:73278578..73278650,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19339 | |EntrezGene=19339 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=P63011,D3YZP5,Q0PD63 | |UniProt=P63011,D3YZP5,Q0PD63 | ||
|association_with_transcript=0bp_to_ENSMUST00000034301,ENSMUST00000110090,ENSMUST00000110093,ENSMUST00000143118,NM_001166399,NM_009001,uc009mbi.2,uc009mbj.2_5end | |||
|cluster_id=chr8:73278578..73278650,+ | |||
|description=CAGE_peak_1_at_Rab3a_5end | |||
|id=chr8:73278578..73278650,+ | |||
|ontology_enrichment_celltype=CL:0000540!8.90e-14!33;CL:0000047!8.90e-14!33;CL:0000031!8.90e-14!33;CL:0000404!8.90e-14!33;CL:0000221!3.03e-13!44;CL:0000133!3.03e-13!44;CL:0000117!3.21e-13!23;CL:0000337!3.21e-13!23;CL:0002319!4.05e-13!43;CL:0000393!2.58e-11!39;CL:0000211!2.58e-11!39;CL:0000055!4.75e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.90e-14,33;CL:0000047,8.90e-14,33;CL:0000031,8.90e-14,33;CL:0000404,8.90e-14,33;CL:0000221,3.03e-13,44;CL:0000133,3.03e-13,44;CL:0000117,3.21e-13,23;CL:0000337,3.21e-13,23;CL:0002319,4.05e-13,43;CL:0000393,2.58e-11,39;CL:0000211,2.58e-11,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.35e-31!73;UBERON:0005743!4.35e-31!73;UBERON:0004121!1.71e-30!102;UBERON:0000924!1.71e-30!102;UBERON:0006601!1.71e-30!102;UBERON:0000073!4.89e-30!75;UBERON:0001016!4.89e-30!75;UBERON:0002346!1.54e-28!71;UBERON:0003075!1.54e-28!71;UBERON:0007284!1.54e-28!71;UBERON:0000033!2.20e-26!63;UBERON:0001049!3.91e-25!52;UBERON:0005068!3.91e-25!52;UBERON:0006241!3.91e-25!52;UBERON:0007135!3.91e-25!52;UBERON:0000955!3.48e-24!50;UBERON:0006238!3.48e-24!50;UBERON:0002616!1.43e-23!49;UBERON:0003056!3.12e-20!49;UBERON:0002020!5.61e-19!34;UBERON:0003080!7.02e-19!40;UBERON:0002780!3.48e-18!39;UBERON:0001890!3.48e-18!39;UBERON:0006240!3.48e-18!39;UBERON:0002791!3.48e-16!29;UBERON:0003528!3.48e-16!29;UBERON:0001893!3.48e-16!29;UBERON:0000956!9.00e-12!21;UBERON:0001869!9.00e-12!21;UBERON:0000203!9.00e-12!21;UBERON:0007811!3.52e-10!86;UBERON:0002619!7.37e-10!17;UBERON:0004111!2.55e-09!122;UBERON:0000025!1.63e-08!114;UBERON:0000153!2.84e-08!94;UBERON:0002021!7.85e-08!10;UBERON:0000411!7.85e-08!10;UBERON:0001950!7.85e-08!10;UBERON:0003076!8.04e-07!12;UBERON:0003057!8.04e-07!12;UBERON:0000479!8.41e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.34e-31,73;UBERON:0001016,4.89e-30,75;UBERON:0004121,8.61e-29,95;UBERON:0000924,8.61e-29,95;UBERON:0006601,8.61e-29,95;UBERON:0010314,7.90e-28,92;UBERON:0002346,2.50e-27,64;UBERON:0003075,2.50e-27,64;UBERON:0007284,2.50e-27,64;UBERON:0000073,1.32e-26,54;UBERON:0001049,3.91e-25,52;UBERON:0005068,3.91e-25,52;UBERON:0006241,3.91e-25,52;UBERON:0007135,3.91e-25,52;UBERON:0010371,2.69e-24,73;UBERON:0000955,4.90e-22,47;UBERON:0006238,4.90e-22,47;UBERON:0002616,1.95e-21,46;UBERON:0003056,3.12e-20,49;UBERON:0002020,5.61e-19,34;UBERON:0003080,7.02e-19,40;UBERON:0002780,3.48e-18,39;UBERON:0001890,3.48e-18,39;UBERON:0006240,3.48e-18,39;UBERON:0003528,3.48e-16,29;UBERON:0002791,3.48e-16,29;UBERON:0001893,3.48e-16,29;UBERON:0000956,9.00e-12,21;UBERON:0001869,9.00e-12,21;UBERON:0000203,9.00e-12,21;UBERON:0002619,7.37e-10,17;UBERON:0004111,2.55e-09,122;UBERON:0000025,1.63e-08,114;UBERON:0002021,7.85e-08,10;UBERON:0000411,7.85e-08,10;UBERON:0001950,7.85e-08,10;UBERON:0003076,8.04e-07,12;UBERON:0003057,8.04e-07,12;UBERON:0000479,8.25e-07,349 | |||
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| ||
|short_description=p1@Rab3a | |||
}} | }} |
Latest revision as of 17:52, 25 September 2015
Short description: | p1@Rab3a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rab3a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000034301, ENSMUST00000110090, ENSMUST00000110093, ENSMUST00000143118, NM_001166399, NM_009001, uc009mbi.2, uc009mbj.2_5end |
EntrezGene: | Rab3a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.90e-14 | 33 |
neuronal stem cell | 8.90e-14 | 33 |
neuroblast | 8.90e-14 | 33 |
electrically signaling cell | 8.90e-14 | 33 |
ectodermal cell | 3.03e-13 | 44 |
neurectodermal cell | 3.03e-13 | 44 |
CNS neuron (sensu Vertebrata) | 3.21e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.21e-13 | 23 |
neural cell | 4.05e-13 | 43 |
electrically responsive cell | 2.58e-11 | 39 |
electrically active cell | 2.58e-11 | 39 |