FFCP PHASE1:Mm9::chr11:78311236..78311295,-: Difference between revisions
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{{FFCP|EntrezGene=237868|HGNC=|MCL_coexpression_id=1995|UniProt=Q6PDS3|association_with_transcript=0bp_to_ENSMUST00000061174,NM_001168521,NM_172795,uc007kji.2,uc007kjj.2_5end|description=CAGE_peak_1_at_Sarm1_5end|id=chr11:78311236..78311295,-|ontology_enrichment_celltype=CL:0002319!1.25e-21!43;CL:0000221!2.58e-21!44;CL:0000133!2.58e-21!44;CL:0000540!1.29e-19!33;CL:0000047!1.29e-19!33;CL:0000031!1.29e-19!33;CL:0000404!1.29e-19!33;CL:0000055!1.34e-19!50;CL:0000393!2.99e-18!39;CL:0000211!2.99e-18!39;CL:0000117!1.43e-16!23;CL:0000337!1.43e-16!23;CL:0002321!1.72e-08!70;CL:0000220!1.72e-08!70|ontology_enrichment_celltype_v019_2=CL:0002319,5.34e-26,43;CL:0000221,5.13e-25,44;CL:0000133,5.13e-25,44;CL:0000540,1.48e-24,33;CL:0000047,1.48e-24,33;CL:0000031,1.48e-24,33;CL:0000404,1.48e-24,33;CL:0000393,7.23e-22,39;CL:0000211,7.23e-22,39;CL:0000117,1.94e-21,23;CL:0000337,1.94e-21,23;CL:0002321,1.64e-12,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.18e-40!73;UBERON:0005743!3.18e-40!73;UBERON:0000073!1.21e-39!75;UBERON:0001016!1.21e-39!75;UBERON:0004121!4.54e-36!102;UBERON:0000924!4.54e-36!102;UBERON:0006601!4.54e-36!102;UBERON:0002346!1.25e-34!71;UBERON:0003075!1.25e-34!71;UBERON:0007284!1.25e-34!71;UBERON:0001049!4.83e-29!52;UBERON:0005068!4.83e-29!52;UBERON:0006241!4.83e-29!52;UBERON:0007135!4.83e-29!52;UBERON:0000033!8.27e-28!63;UBERON:0000955!2.65e-27!50;UBERON:0006238!2.65e-27!50;UBERON:0002616!9.00e-27!49;UBERON:0003056!1.25e-24!49;UBERON:0002020!8.56e-22!34;UBERON:0003080!9.90e-22!40;UBERON:0002780!3.28e-21!39;UBERON:0001890!3.28e-21!39;UBERON:0006240!3.28e-21!39;UBERON:0002791!4.16e-18!29;UBERON:0003528!4.16e-18!29;UBERON:0001893!4.16e-18!29;UBERON:0007811!5.75e-16!86;UBERON:0000153!1.58e-15!94;UBERON:0000956!2.93e-13!21;UBERON:0001869!2.93e-13!21;UBERON:0000203!2.93e-13!21;UBERON:0002619!8.40e-11!17;UBERON:0003076!1.04e-07!12;UBERON:0003057!1.04e-07!12;UBERON:0002021!3.56e-07!10;UBERON:0000411!3.56e-07!10;UBERON:0001950!3.56e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.98e-52,73;UBERON:0001016,1.05e-49,75;UBERON:0004121,4.74e-44,95;UBERON:0000924,4.74e-44,95;UBERON:0006601,4.74e-44,95;UBERON:0002346,2.61e-43,64;UBERON:0003075,2.61e-43,64;UBERON:0007284,2.61e-43,64;UBERON:0000073,3.07e-40,54;UBERON:0001049,5.40e-38,52;UBERON:0005068,5.40e-38,52;UBERON:0006241,5.40e-38,52;UBERON:0007135,5.40e-38,52;UBERON:0010371,9.32e-35,73;UBERON:0000955,9.15e-33,47;UBERON:0006238,9.15e-33,47;UBERON:0002616,4.51e-32,46;UBERON:0003056,2.02e-31,49;UBERON:0002020,2.28e-28,34;UBERON:0010314,2.39e-28,92;UBERON:0003080,2.76e-28,40;UBERON:0002780,1.36e-27,39;UBERON:0001890,1.36e-27,39;UBERON:0006240,1.36e-27,39;UBERON:0003528,1.78e-23,29;UBERON:0002791,1.78e-23,29;UBERON:0001893,1.78e-23,29;UBERON:0000956,4.76e-17,21;UBERON:0001869,4.76e-17,21;UBERON:0000203,4.76e-17,21;UBERON:0002619,8.55e-14,17;UBERON:0003076,1.05e-09,12;UBERON:0003057,1.05e-09,12;UBERON:0002021,5.33e-09,10;UBERON:0000411,5.33e-09,10;UBERON:0001950,5.33e-09,10;UBERON:0000025,2.00e-08,114;UBERON:0002420,1.56e-07,8;UBERON:0007245,1.56e-07,8;UBERON:0010009,1.56e-07,8;UBERON:0010011,1.56e-07,8;UBERON:0000454,1.56e-07,8;UBERON:0004111,8.84e-07,122|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.258246646883153,0.422366166455,0.70219357896598,0,0.0797721589953364,0,0.524522414513984,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,1.52065396829272,0.917733760808408,1.56478268869608,4.79655344036982,4.83309602015838,6.9994763666742,1.25987779462826,4.31257693094915,0,0.725362142011344,0.336093799142464,0,0.286533439938757,1.03134418455488,25.2895576074497,48.138179113755,38.6637156138769,1.0165335962074,0.889294796111139,0,0,0,5.39280198933128,4.61061966385865,18.456750990909,25.5161223446895,18.718921560273,18.852964970651,28.0503047008549,17.3936934885235,11.9806838772795,70.7798465689716,34.1359231098105,16.0886045987337,19.2008166570304,24.6627358055462,17.5656275716627,23.962015045611,21.4970909231063,12.9435400307286,20.1693687065389,32.9984015730508,29.7556812870125,26.8415201988433,0.302904773332736,0.604572480854284,0,0,0,0.539703191637817,0,0,0.561777680527007,0.340860645156116,0,0.35333957451034,0.422530259330042,2.56652954828636,0,0,0,0,0,0.34255163915718,0,1.03909497345377,1.38788261412909,1.21786191324856,1.61430848079241,2.41156224884196,1.41106448562846,0.753999547978053,0,0.144599356919912,0,0,0,0,0,14.3462590535658,11.9384622883669,0,0,0,0,7.78911324905078,6.40500843946077,9.42407640846483,11.298580812498,6.64860189058859,5.81806524766768,6.48965052271031,0.203678727700633,0,0,4.20883711772948,0.520481771850815,2.06911893990126,2.34080768746954,3.91832526372859,4.35433594568498,4.22775276940004,7.40243624021858,12.6764651662118,0.646703978798527,0.567318240503458,0.351902248327898,0.219195732427575,0.834141747676794,1.0447564995665,0.823128545631774,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0.268412837520744,11.3556572224629,11.216602749342,0,0,1.06644125267617,0.464473343720877,0.515469845288373,0.403367049246685,0,0.380451252225118,0,0.329397909448022,0.251335208800269,0,0,0,0.216138049874694,0,0.569003702859245,0.456994050438915,0,0.610953983535943,0.387904974335251,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.554259570499814,0.189491411770485,0,0.339490171550376,0.469380496577004,0,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0,0.144649058581512,0,1.08781136763742,0,0,10.4357883492065,7.03270119553219,0.819674726883377,0,2.52406575533005,7.41833614163613,4.73931475012158,3.58453196928828,6.23836287430704,3.96307143104365,2.83367491172426,7.89090816360542,6.32460444714438,7.06906896127976,0.567760340833074,0.178065603667255,0.651547837414304,1.15479086080775,0,0.728341908464944,0.906970670894253,0.565815239267694,0.885905678642318,0.307435147943927,0,0.363533729477506,0,0.632073515871632,0,0,3.74483566329167,2.70091641046965,1.29358683782755,2.35770738534752,1.95074257006501,3.92411398724555,4.27827453565514,4.87143918583359,0.23467170806371,0,0.661585194164886,0.16488625294148,0,0,0.119372344003136,0.164140899745061,0.582961673259701,7.97328798645192,0,0.619160603889667,0,0,0.136694227721025,0,0,0,0,0,0.632671987162271,0.609958401380546,0.432021363287205,0.209088296014469,0.87345025498471,0.539457385539283,0.41326727862668,0.785267825952089,0.129614973291793,0,0,0.299033092087958,0.496375471371293,0.777804753376191,0.129159823477731,1.18269287843545,0.234714477291508,0.2604087696879,0.104859344425711,0,0,0,0.202725215290164,0,0.389762468933385,0.179026695667481,0,0,0,0,0,0.201652370273681,0.0974578807397524,0,0.116876902181569,0,0.221985953374065,0,0.167884616364078,0,0.375364950902364,0.549454872801795,0,0,11.2950368523413,17.9526842237799,21.1971339972577,26.1216837162405,15.0718154349541,14.3524840504043,12.8254275044043,14.8605997063993,18.1256963593682,10.3552062350364,1.66059756134683,2.39414924040619,5.12200817262403,1.70174701947806,2.72497111416377,1.10306105070008,1.77797382241292,1.64828045791115,1.28367683836726,1.26348605881899,2.5347929989024,1.88626341386076,1.96647165686753,1.6646539625266,1.37845125493472,1.42888107384922,0.579421629724277,0.964546102318525,1.23625770240992,1.91358596174717,1.02860775715625,1.06485483695602,1.43061713968393,2.0348498328526,1.50575008664529,1.86152137361688,0.73171189149109,2.36762740294059,2.58027816307137,1.12228454331548,1.77952527186261,2.85662998889134,0.818462086339379,2.63392630016142,1.35034627686799,5.74564329257276,1.16965804222704,1.93383948643468,0.57386499620653,0.441182838239031,0.927471342481686|short_description=p1@Sarm1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=237868 | |||
|HGNC= | |||
|MCL_coexpression_id=1995 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PDS3 | |||
|association_with_transcript=0bp_to_ENSMUST00000061174,NM_001168521,NM_172795,uc007kji.2,uc007kjj.2_5end | |||
|cluster_id=chr11:78311236..78311295,- | |||
|description=CAGE_peak_1_at_Sarm1_5end | |||
|id=chr11:78311236..78311295,- | |||
|ontology_enrichment_celltype=CL:0002319!1.25e-21!43;CL:0000221!2.58e-21!44;CL:0000133!2.58e-21!44;CL:0000540!1.29e-19!33;CL:0000047!1.29e-19!33;CL:0000031!1.29e-19!33;CL:0000404!1.29e-19!33;CL:0000055!1.34e-19!50;CL:0000393!2.99e-18!39;CL:0000211!2.99e-18!39;CL:0000117!1.43e-16!23;CL:0000337!1.43e-16!23;CL:0002321!1.72e-08!70;CL:0000220!1.72e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.34e-26,43;CL:0000221,5.13e-25,44;CL:0000133,5.13e-25,44;CL:0000540,1.48e-24,33;CL:0000047,1.48e-24,33;CL:0000031,1.48e-24,33;CL:0000404,1.48e-24,33;CL:0000393,7.23e-22,39;CL:0000211,7.23e-22,39;CL:0000117,1.94e-21,23;CL:0000337,1.94e-21,23;CL:0002321,1.64e-12,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.18e-40!73;UBERON:0005743!3.18e-40!73;UBERON:0000073!1.21e-39!75;UBERON:0001016!1.21e-39!75;UBERON:0004121!4.54e-36!102;UBERON:0000924!4.54e-36!102;UBERON:0006601!4.54e-36!102;UBERON:0002346!1.25e-34!71;UBERON:0003075!1.25e-34!71;UBERON:0007284!1.25e-34!71;UBERON:0001049!4.83e-29!52;UBERON:0005068!4.83e-29!52;UBERON:0006241!4.83e-29!52;UBERON:0007135!4.83e-29!52;UBERON:0000033!8.27e-28!63;UBERON:0000955!2.65e-27!50;UBERON:0006238!2.65e-27!50;UBERON:0002616!9.00e-27!49;UBERON:0003056!1.25e-24!49;UBERON:0002020!8.56e-22!34;UBERON:0003080!9.90e-22!40;UBERON:0002780!3.28e-21!39;UBERON:0001890!3.28e-21!39;UBERON:0006240!3.28e-21!39;UBERON:0002791!4.16e-18!29;UBERON:0003528!4.16e-18!29;UBERON:0001893!4.16e-18!29;UBERON:0007811!5.75e-16!86;UBERON:0000153!1.58e-15!94;UBERON:0000956!2.93e-13!21;UBERON:0001869!2.93e-13!21;UBERON:0000203!2.93e-13!21;UBERON:0002619!8.40e-11!17;UBERON:0003076!1.04e-07!12;UBERON:0003057!1.04e-07!12;UBERON:0002021!3.56e-07!10;UBERON:0000411!3.56e-07!10;UBERON:0001950!3.56e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.98e-52,73;UBERON:0001016,1.05e-49,75;UBERON:0004121,4.74e-44,95;UBERON:0000924,4.74e-44,95;UBERON:0006601,4.74e-44,95;UBERON:0002346,2.61e-43,64;UBERON:0003075,2.61e-43,64;UBERON:0007284,2.61e-43,64;UBERON:0000073,3.07e-40,54;UBERON:0001049,5.40e-38,52;UBERON:0005068,5.40e-38,52;UBERON:0006241,5.40e-38,52;UBERON:0007135,5.40e-38,52;UBERON:0010371,9.32e-35,73;UBERON:0000955,9.15e-33,47;UBERON:0006238,9.15e-33,47;UBERON:0002616,4.51e-32,46;UBERON:0003056,2.02e-31,49;UBERON:0002020,2.28e-28,34;UBERON:0010314,2.39e-28,92;UBERON:0003080,2.76e-28,40;UBERON:0002780,1.36e-27,39;UBERON:0001890,1.36e-27,39;UBERON:0006240,1.36e-27,39;UBERON:0003528,1.78e-23,29;UBERON:0002791,1.78e-23,29;UBERON:0001893,1.78e-23,29;UBERON:0000956,4.76e-17,21;UBERON:0001869,4.76e-17,21;UBERON:0000203,4.76e-17,21;UBERON:0002619,8.55e-14,17;UBERON:0003076,1.05e-09,12;UBERON:0003057,1.05e-09,12;UBERON:0002021,5.33e-09,10;UBERON:0000411,5.33e-09,10;UBERON:0001950,5.33e-09,10;UBERON:0000025,2.00e-08,114;UBERON:0002420,1.56e-07,8;UBERON:0007245,1.56e-07,8;UBERON:0010009,1.56e-07,8;UBERON:0010011,1.56e-07,8;UBERON:0000454,1.56e-07,8;UBERON:0004111,8.84e-07,122 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.258246646883153,0.422366166455,0.70219357896598,0,0.0797721589953364,0,0.524522414513984,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,1.52065396829272,0.917733760808408,1.56478268869608,4.79655344036982,4.83309602015838,6.9994763666742,1.25987779462826,4.31257693094915,0,0.725362142011344,0.336093799142464,0,0.286533439938757,1.03134418455488,25.2895576074497,48.138179113755,38.6637156138769,1.0165335962074,0.889294796111139,0,0,0,5.39280198933128,4.61061966385865,18.456750990909,25.5161223446895,18.718921560273,18.852964970651,28.0503047008549,17.3936934885235,11.9806838772795,70.7798465689716,34.1359231098105,16.0886045987337,19.2008166570304,24.6627358055462,17.5656275716627,23.962015045611,21.4970909231063,12.9435400307286,20.1693687065389,32.9984015730508,29.7556812870125,26.8415201988433,0.302904773332736,0.604572480854284,0,0,0,0.539703191637817,0,0,0.561777680527007,0.340860645156116,0,0.35333957451034,0.422530259330042,2.56652954828636,0,0,0,0,0,0.34255163915718,0,1.03909497345377,1.38788261412909,1.21786191324856,1.61430848079241,2.41156224884196,1.41106448562846,0.753999547978053,0,0.144599356919912,0,0,0,0,0,14.3462590535658,11.9384622883669,0,0,0,0,7.78911324905078,6.40500843946077,9.42407640846483,11.298580812498,6.64860189058859,5.81806524766768,6.48965052271031,0.203678727700633,0,0,4.20883711772948,0.520481771850815,2.06911893990126,2.34080768746954,3.91832526372859,4.35433594568498,4.22775276940004,7.40243624021858,12.6764651662118,0.646703978798527,0.567318240503458,0.351902248327898,0.219195732427575,0.834141747676794,1.0447564995665,0.823128545631774,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0.268412837520744,11.3556572224629,11.216602749342,0,0,1.06644125267617,0.464473343720877,0.515469845288373,0.403367049246685,0,0.380451252225118,0,0.329397909448022,0.251335208800269,0,0,0,0.216138049874694,0,0.569003702859245,0.456994050438915,0,0.610953983535943,0.387904974335251,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.554259570499814,0.189491411770485,0,0.339490171550376,0.469380496577004,0,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0,0.144649058581512,0,1.08781136763742,0,0,10.4357883492065,7.03270119553219,0.819674726883377,0,2.52406575533005,7.41833614163613,4.73931475012158,3.58453196928828,6.23836287430704,3.96307143104365,2.83367491172426,7.89090816360542,6.32460444714438,7.06906896127976,0.567760340833074,0.178065603667255,0.651547837414304,1.15479086080775,0,0.728341908464944,0.906970670894253,0.565815239267694,0.885905678642318,0.307435147943927,0,0.363533729477506,0,0.632073515871632,0,0,3.74483566329167,2.70091641046965,1.29358683782755,2.35770738534752,1.95074257006501,3.92411398724555,4.27827453565514,4.87143918583359,0.23467170806371,0,0.661585194164886,0.16488625294148,0,0,0.119372344003136,0.164140899745061,0.582961673259701,7.97328798645192,0,0.619160603889667,0,0,0.136694227721025,0,0,0,0,0,0.632671987162271,0.609958401380546,0.432021363287205,0.209088296014469,0.87345025498471,0.539457385539283,0.41326727862668,0.785267825952089,0.129614973291793,0,0,0.299033092087958,0.496375471371293,0.777804753376191,0.129159823477731,1.18269287843545,0.234714477291508,0.2604087696879,0.104859344425711,0,0,0,0.202725215290164,0,0.389762468933385,0.179026695667481,0,0,0,0,0,0.201652370273681,0.0974578807397524,0,0.116876902181569,0,0.221985953374065,0,0.167884616364078,0,0.375364950902364,0.549454872801795,0,0,11.2950368523413,17.9526842237799,21.1971339972577,26.1216837162405,15.0718154349541,14.3524840504043,12.8254275044043,14.8605997063993,18.1256963593682,10.3552062350364,1.66059756134683,2.39414924040619,5.12200817262403,1.70174701947806,2.72497111416377,1.10306105070008,1.77797382241292,1.64828045791115,1.28367683836726,1.26348605881899,2.5347929989024,1.88626341386076,1.96647165686753,1.6646539625266,1.37845125493472,1.42888107384922,0.579421629724277,0.964546102318525,1.23625770240992,1.91358596174717,1.02860775715625,1.06485483695602,1.43061713968393,2.0348498328526,1.50575008664529,1.86152137361688,0.73171189149109,2.36762740294059,2.58027816307137,1.12228454331548,1.77952527186261,2.85662998889134,0.818462086339379,2.63392630016142,1.35034627686799,5.74564329257276,1.16965804222704,1.93383948643468,0.57386499620653,0.441182838239031,0.927471342481686 | |||
|short_description=p1@Sarm1 | |||
}} |
Latest revision as of 18:04, 25 September 2015
Short description: | p1@Sarm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sarm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1995 |
Association with transcript: | 0bp_to_ENSMUST00000061174, NM_001168521, NM_172795, uc007kji.2, uc007kjj.2_5end |
EntrezGene: | Sarm1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.34e-26 | 43 |
ectodermal cell | 5.13e-25 | 44 |
neurectodermal cell | 5.13e-25 | 44 |
neuron | 1.48e-24 | 33 |
neuronal stem cell | 1.48e-24 | 33 |
neuroblast | 1.48e-24 | 33 |
electrically signaling cell | 1.48e-24 | 33 |
electrically responsive cell | 7.23e-22 | 39 |
electrically active cell | 7.23e-22 | 39 |
CNS neuron (sensu Vertebrata) | 1.94e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.94e-21 | 23 |
embryonic cell | 1.64e-12 | 70 |