FFCP PHASE1:Mm9::chr19:41103869..41103888,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21673 | |EntrezGene=21673 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=4 | |MCL_coexpression_id=4 | ||
|TSSclassifier=NA | |||
|UniProt=P09838,Q3UZ80 | |UniProt=P09838,Q3UZ80 | ||
|association_with_transcript=104bp_to_ENSMUST00000051806,ENSMUST00000112200,NM_001043228,NM_009345,uc008hlo.1,uc008hlp.1_5end | |association_with_transcript=104bp_to_ENSMUST00000051806,ENSMUST00000112200,NM_001043228,NM_009345,uc008hlo.1,uc008hlp.1_5end | ||
|cluster_id=chr19:41103869..41103888,+ | |||
|description=CAGE_peak_1_at_Dntt_5end | |description=CAGE_peak_1_at_Dntt_5end | ||
|id=chr19:41103869..41103888,+ | |id=chr19:41103869..41103888,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.61e-12!48;UBERON:0004177!7.41e-12!29;UBERON:0002390!1.10e-10!45;UBERON:0003061!1.10e-10!45;UBERON:0002370!2.08e-10!23;UBERON:0000974!2.08e-10!23;UBERON:0004807!2.08e-10!23;UBERON:0005058!2.08e-10!23;UBERON:0003351!2.08e-10!23;UBERON:0009113!2.08e-10!23;UBERON:0003295!2.08e-10!23;UBERON:0009722!2.08e-10!23;UBERON:0005562!2.08e-10!23;UBERON:0007690!2.08e-10!23;UBERON:0006562!9.90e-10!24;UBERON:0003408!9.90e-10!24;UBERON:0001557!9.90e-10!24;UBERON:0001042!9.90e-10!24;UBERON:0008814!9.90e-10!24;UBERON:0009145!9.90e-10!24;UBERON:0000065!1.86e-09!41;UBERON:0001004!4.82e-09!42;UBERON:0002405!1.40e-08!70;UBERON:0003081!1.86e-08!88;UBERON:0000072!5.06e-08!27;UBERON:0005057!4.89e-07!51 | |ontology_enrichment_uberon=UBERON:0002193!3.61e-12!48;UBERON:0004177!7.41e-12!29;UBERON:0002390!1.10e-10!45;UBERON:0003061!1.10e-10!45;UBERON:0002370!2.08e-10!23;UBERON:0000974!2.08e-10!23;UBERON:0004807!2.08e-10!23;UBERON:0005058!2.08e-10!23;UBERON:0003351!2.08e-10!23;UBERON:0009113!2.08e-10!23;UBERON:0003295!2.08e-10!23;UBERON:0009722!2.08e-10!23;UBERON:0005562!2.08e-10!23;UBERON:0007690!2.08e-10!23;UBERON:0006562!9.90e-10!24;UBERON:0003408!9.90e-10!24;UBERON:0001557!9.90e-10!24;UBERON:0001042!9.90e-10!24;UBERON:0008814!9.90e-10!24;UBERON:0009145!9.90e-10!24;UBERON:0000065!1.86e-09!41;UBERON:0001004!4.82e-09!42;UBERON:0002405!1.40e-08!70;UBERON:0003081!1.86e-08!88;UBERON:0000072!5.06e-08!27;UBERON:0005057!4.89e-07!51 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,8.61e-15,29;UBERON:0005057,8.61e-15,29;UBERON:0002370,1.85e-13,23;UBERON:0000974,1.85e-13,23;UBERON:0004807,1.85e-13,23;UBERON:0005058,1.85e-13,23;UBERON:0003351,1.85e-13,23;UBERON:0009113,1.85e-13,23;UBERON:0003295,1.85e-13,23;UBERON:0009722,1.85e-13,23;UBERON:0005562,1.85e-13,23;UBERON:0007690,1.85e-13,23;UBERON:0006562,9.71e-13,24;UBERON:0003408,9.71e-13,24;UBERON:0001557,9.71e-13,24;UBERON:0001042,9.71e-13,24;UBERON:0008814,9.71e-13,24;UBERON:0009145,9.71e-13,24;UBERON:0000077,1.85e-11,35;UBERON:0000065,4.09e-11,41;UBERON:0000072,6.62e-11,27;UBERON:0001004,9.86e-11,42;UBERON:0002193,4.08e-09,48;UBERON:0002405,4.08e-09,48;UBERON:0002390,6.57e-09,45;UBERON:0003061,6.57e-09,45;UBERON:0003081,2.54e-08,87;UBERON:0007811,2.79e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,3.37892933164,0,0.171217968225505,0,6.67682846731702,0.699363219351979,0.666219523631325,0.404950534779652,0,1.10411757875383,0.548457734422955,0.84877930359606,9.18467533631554,5.06383851124515,4.4403964153619,0.159992422793407,0.68822784320151,0.57423196411502,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0.7813353445238,1.0470474879476,2.35292595212406,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,0.167782606057736,2.90144856804538,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.12888730856387,0,0,0,0,0,0,0,0,0,0,8.5637909789295,2.33044095282455,0,0,0,0,0,0,0,0,0,24.7690954545965,0.323533699894818,20.3174196983562,36.8505192382769,0,0,0,0,104.718418818174,31.1949420116572,33.0382590389968,0,0,0,0,0,0,0,0,24.3837662395782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0.284163499395593,0,0,0,0,0,0,0,0,0.350296027101508,0,1.97000956894914,1.94565142910054,6.87139940899062,1.75640092232841,0.805238512562231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,2.97712758134803,3.43241440426017,0.757736633841335,0,0,0.184753190166605,0,0,0,0,0.670025029767263,0,0,1.10344600874334,0.8858587585951,1.11618338060241,1.3109065177259,1.20879487306127,1.15719246865209,0,0,0,0,0.160550589987792,0.117211686592203,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0.164140899745061,0,0.18542530201051,0.854354403989263,0,0,8.2882121082064,2.05041341581538,1.83022538565218,213.662886502276,235.258391356069,209.787560235115,0,0,0,0,0,0,0,0.330613822901344,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,961.305828950918,0,0.102710957164827,1.29920822977795,5.19177417435696,31.5903354102211,185.221187710272,208.094543788979,453.137427367287,307.418258046269,584.186916682854,749.548560769436,735.347105657038,821.64462233643,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.701794825336225,1.28922632428979,0,1.32354851471709,7.88350641109433 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,3.37892933164,0,0.171217968225505,0,6.67682846731702,0.699363219351979,0.666219523631325,0.404950534779652,0,1.10411757875383,0.548457734422955,0.84877930359606,9.18467533631554,5.06383851124515,4.4403964153619,0.159992422793407,0.68822784320151,0.57423196411502,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0.7813353445238,1.0470474879476,2.35292595212406,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,0.167782606057736,2.90144856804538,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.12888730856387,0,0,0,0,0,0,0,0,0,0,8.5637909789295,2.33044095282455,0,0,0,0,0,0,0,0,0,24.7690954545965,0.323533699894818,20.3174196983562,36.8505192382769,0,0,0,0,104.718418818174,31.1949420116572,33.0382590389968,0,0,0,0,0,0,0,0,24.3837662395782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0.284163499395593,0,0,0,0,0,0,0,0,0.350296027101508,0,1.97000956894914,1.94565142910054,6.87139940899062,1.75640092232841,0.805238512562231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,2.97712758134803,3.43241440426017,0.757736633841335,0,0,0.184753190166605,0,0,0,0,0.670025029767263,0,0,1.10344600874334,0.8858587585951,1.11618338060241,1.3109065177259,1.20879487306127,1.15719246865209,0,0,0,0,0.160550589987792,0.117211686592203,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0.164140899745061,0,0.18542530201051,0.854354403989263,0,0,8.2882121082064,2.05041341581538,1.83022538565218,213.662886502276,235.258391356069,209.787560235115,0,0,0,0,0,0,0,0.330613822901344,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,961.305828950918,0,0.102710957164827,1.29920822977795,5.19177417435696,31.5903354102211,185.221187710272,208.094543788979,453.137427367287,307.418258046269,584.186916682854,749.548560769436,735.347105657038,821.64462233643,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.701794825336225,1.28922632428979,0,1.32354851471709,7.88350641109433 | ||
|short_description=p1@Dntt | |short_description=p1@Dntt | ||
}} | }} |
Latest revision as of 18:18, 25 September 2015
Short description: | p1@Dntt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dntt_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | 104bp_to_ENSMUST00000051806, ENSMUST00000112200, NM_001043228, NM_009345, uc008hlo.1, uc008hlp.1_5end |
EntrezGene: | Dntt |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 8.61e-15 | 29 |
immune organ | 8.61e-15 | 29 |
thymus | 1.85e-13 | 23 |
neck | 1.85e-13 | 23 |
respiratory system epithelium | 1.85e-13 | 23 |
hemolymphoid system gland | 1.85e-13 | 23 |
pharyngeal epithelium | 1.85e-13 | 23 |
thymic region | 1.85e-13 | 23 |
pharyngeal gland | 1.85e-13 | 23 |
entire pharyngeal arch endoderm | 1.85e-13 | 23 |
thymus primordium | 1.85e-13 | 23 |
early pharyngeal endoderm | 1.85e-13 | 23 |
pharynx | 9.71e-13 | 24 |
gland of gut | 9.71e-13 | 24 |
upper respiratory tract | 9.71e-13 | 24 |
chordate pharynx | 9.71e-13 | 24 |
pharyngeal arch system | 9.71e-13 | 24 |
pharyngeal region of foregut | 9.71e-13 | 24 |
mixed endoderm/mesoderm-derived structure | 1.85e-11 | 35 |
respiratory tract | 4.09e-11 | 41 |
segment of respiratory tract | 6.62e-11 | 27 |
respiratory system | 9.86e-11 | 42 |
hemolymphoid system | 4.08e-09 | 48 |
immune system | 4.08e-09 | 48 |
hematopoietic system | 6.57e-09 | 45 |
blood island | 6.57e-09 | 45 |
lateral plate mesoderm | 2.54e-08 | 87 |
craniocervical region | 2.79e-07 | 36 |