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FFCP PHASE1:Mm9::chr2:132088872..132089004,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=110911
|EntrezGene=110911
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q99L43,Q6PBC0,A2AMQ4
|UniProt=Q99L43,Q6PBC0,A2AMQ4
|association_with_transcript=0bp_to_ENSMUST00000103181,ENSMUST00000110158,ENSMUST00000147456,NM_138651,uc008mmn.1,uc008mmo.1_5end
|association_with_transcript=0bp_to_ENSMUST00000103181,ENSMUST00000110158,ENSMUST00000147456,NM_138651,uc008mmn.1,uc008mmo.1_5end
|cluster_id=chr2:132088872..132089004,+
|description=CAGE_peak_1_at_Cds2_5end
|description=CAGE_peak_1_at_Cds2_5end
|id=chr2:132088872..132089004,+
|id=chr2:132088872..132089004,+
|ontology_enrichment_celltype=CL:0000117!1.38e-10!23;CL:0000337!1.38e-10!23
|ontology_enrichment_celltype=CL:0000117!1.38e-10!23;CL:0000337!1.38e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.38e-10,23;CL:0000337,1.38e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.44e-21!52;UBERON:0005068!1.44e-21!52;UBERON:0006241!1.44e-21!52;UBERON:0007135!1.44e-21!52;UBERON:0000955!6.68e-21!50;UBERON:0006238!6.68e-21!50;UBERON:0000073!1.53e-20!75;UBERON:0001016!1.53e-20!75;UBERON:0002616!3.05e-20!49;UBERON:0001017!3.14e-20!73;UBERON:0005743!3.14e-20!73;UBERON:0000033!7.34e-20!63;UBERON:0002346!3.35e-19!71;UBERON:0003075!3.35e-19!71;UBERON:0007284!3.35e-19!71;UBERON:0007811!6.26e-18!86;UBERON:0003080!2.61e-17!40;UBERON:0003056!8.02e-17!49;UBERON:0002780!1.27e-16!39;UBERON:0001890!1.27e-16!39;UBERON:0006240!1.27e-16!39;UBERON:0002020!8.38e-16!34;UBERON:0004121!3.27e-15!102;UBERON:0000924!3.27e-15!102;UBERON:0006601!3.27e-15!102;UBERON:0004111!2.93e-14!122;UBERON:0000153!3.73e-14!94;UBERON:0000025!1.53e-13!114;UBERON:0002791!3.07e-13!29;UBERON:0003528!3.07e-13!29;UBERON:0001893!3.07e-13!29;UBERON:0000477!4.73e-12!154;UBERON:0000483!1.92e-11!181;UBERON:0000119!2.54e-11!183;UBERON:0000956!5.33e-09!21;UBERON:0001869!5.33e-09!21;UBERON:0000203!5.33e-09!21;UBERON:0002619!4.45e-08!17;UBERON:0000475!3.27e-07!200;UBERON:0002021!8.53e-07!10;UBERON:0000411!8.53e-07!10;UBERON:0001950!8.53e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.06e-23,54;UBERON:0001049,1.44e-21,52;UBERON:0005068,1.44e-21,52;UBERON:0006241,1.44e-21,52;UBERON:0007135,1.44e-21,52;UBERON:0001016,1.53e-20,75;UBERON:0001017,3.14e-20,73;UBERON:0002346,3.84e-20,64;UBERON:0003075,3.84e-20,64;UBERON:0007284,3.84e-20,64;UBERON:0000955,8.02e-19,47;UBERON:0006238,8.02e-19,47;UBERON:0002616,3.52e-18,46;UBERON:0010314,1.29e-17,92;UBERON:0003080,2.61e-17,40;UBERON:0003056,8.02e-17,49;UBERON:0002780,1.27e-16,39;UBERON:0001890,1.27e-16,39;UBERON:0006240,1.27e-16,39;UBERON:0002020,8.38e-16,34;UBERON:0004121,1.87e-15,95;UBERON:0000924,1.87e-15,95;UBERON:0006601,1.87e-15,95;UBERON:0004111,2.93e-14,122;UBERON:0010371,3.79e-14,73;UBERON:0000025,1.53e-13,114;UBERON:0003528,3.07e-13,29;UBERON:0002791,3.07e-13,29;UBERON:0001893,3.07e-13,29;UBERON:0000483,3.26e-11,174;UBERON:0000119,4.37e-11,176;UBERON:0000956,5.33e-09,21;UBERON:0001869,5.33e-09,21;UBERON:0000203,5.33e-09,21;UBERON:0002619,4.45e-08,17;UBERON:0002021,8.53e-07,10;UBERON:0000411,8.53e-07,10;UBERON:0001950,8.53e-07,10
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0036,11.7925290933572,9.72048067396211,9.40897332065109,9.17122767733946,9.71023293970709,12.7286321817017,16.4906243449939,25.663764711775,17.3975007664339,7.32800820289447,10.4661582230785,12.0784698033681,12.444876054019,13.0451421712508,12.6717094118084,15.256441023948,16.1453437206498,18.5601039633508,14.4950472495604,12.0972602628303,22.1207784439725,10.9471616256689,10.1683847593179,12.9920822977795,18.7978030450856,22.4509930902829,23.6785035554339,18.4611908968222,18.5778267904592,22.70962838319,23.2908487666102,20.7585285975673,23.956748568442,27.3491951104871,13.1503622496823,7.99149432146633,7.89481938163386,6.88326927092722,35.546885301923,22.709579529593,12.0880072016395,12.2189976075068,30.5958983461572,65.5112137435797,63.9852078744976,61.2998199380154,72.5220429490362,80.8397373329358,80.827147020698,94.5031500324528,76.1042833448933,89.2690545698883,84.9126911272985,8.71813719707084,11.1726964552289,14.6830900948555,12.8846560046196,12.5767897576789,11.0306105070008,13.7792971237001,12.3621034343337,13.7995260124481,14.9091354940641,12.1670063947315,15.6559863350443,14.0462261204824,17.9910678257683,16.3116731833942,16.1939855036245,18.1938391733423,17.1689206212697,16.4834360321323,13.8366984926333,14.057639347802,13.665637074269,17.6442780561018,14.2439488299682,18.7277667026508,14.8075563810434,15.7318056670584,13.9426947062057,15.0742566368907,15.1508413347589,15.5411873742668,13.8891320149544,19.2338590289754,14.0992525479229,14.0821826016233,17.7365510335942,16.3752125911786,13.5368764050428,18.363679878609,16.9855392722027,15.9988806578091
|phase1_expression=21.2997966649376,12.2141392673776,17.2899710968024,28.1291716515352,29.0519523368881,11.2479112180966,11.6806320297763,32.6682008307188,12.248618827195,11.2350972634557,8.90333434772626,10.2108363514031,26.5361131393369,25.6141779087662,8.99396356902289,10.5287139042709,6.99561878128147,25.5524353940173,29.2053743580224,23.7658205006897,37.9293074073771,7.04965753526286,4.70159620450084,9.91953021319121,15.8292403936347,17.8011908875656,14.2151458732495,12.9282739611533,17.1021077510736,13.1055667475164,12.4169085966971,14.6057054895715,19.0670084151217,15.8481681015439,12.7094712690561,12.1351291111699,12.4543307320045,66.5465292871683,39.06676722619,40.3113282859825,72.3524730278148,71.0367304356784,61.6598148349565,13.2191658874356,14.9024088892686,18.1711284640065,10.9534788208725,13.2995345392072,23.9457939180574,28.7756250629939,13.0187372111587,15.8127820801469,27.6841299995265,35.5427449585559,36.2981303073861,13.6347501099052,14.6132054368766,16.5015069528782,44.3073049282519,43.3772603003067,55.7771635085438,15.9256930072492,14.2287167377782,14.3983954765024,18.7884608887725,17.7620028736525,17.9760066311043,18.4424786554346,22.5006458709397,21.0609263797437,26.5009451302741,73.1266520073737,65.8188252035808,20.3334726696824,27.0284228271427,21.1420320920305,101.306610519438,136.242389736895,130.872766334319,44.7094515405357,50.4096916249277,34.9011958273029,128.982545538638,157.010768198839,147.297510856845,63.0505172913649,57.0910440004403,51.2598476019577,19.0072745266292,26.3744744772681,38.5519769973231,36.9982267101996,14.9593693415705,12.4131734076698,35.0879265421741,30.9138552097162,19.9431076587088,13.6344258062446,10.3914401841148,16.606960001986,17.8871143116384,20.5322363862909,22.9324715735981,78.2173373468664,17.3192832808971,20.2687892380079,16.6823066854878,21.5807532669023,17.3488382043605,30.7275227864187,14.5727674483554,9.74289530598852,13.8369298353635,22.6083960828934,21.9890882343768,20.4836543867371,41.0343646439061,17.7857209011491,24.7690954545965,11.1619126463712,11.2629174414801,9.21262980956922,20.5030937339934,88.1270199004757,103.466673165847,11.240110429178,7.42853771936706,7.7987355029143,5.84523044536098,125.524555821241,109.342644073652,37.8219599859722,115.419348607672,112.003370310685,133.192136562678,109.026128781533,14.155671575194,16.6705340617525,21.2287117084287,59.3446033599857,13.7927669540466,14.7137346837423,16.3856538122868,15.3718914192429,20.547022743701,20.498195245576,21.6450983732974,46.8253101037618,14.8741915123661,14.9393803332577,10.381116325673,9.64461222681329,11.1218899690239,8.70630416305416,9.26019613835746,15.1266042782055,2.80885274925294,5.40430604940902,9.09323198065896,9.52778553663309,7.27030785941398,12.604344302271,13.2577051927718,13.9702604540657,18.9748548851475,19.5328513590343,24.1446061259657,28.7242742223237,23.2029388378007,21.9984401865988,30.6440100083335,30.1171974096185,27.2242142960903,32.6121597587703,111.874252636116,27.8871499547861,13.5471701023357,8.99131926656051,11.7308537794379,12.7730169523241,12.5001437482431,12.1010114774006,10.0070119730192,11.0330863145284,16.1339880925134,13.0112174231969,14.3261069016154,10.7436494902221,12.2827374885046,17.0775687644302,13.6166971421057,13.9398891278057,11.0007382552787,13.481324487948,18.0332377076929,13.8482902934814,14.3524840504043,16.0611027548829,17.706230394792,19.9273699772463,17.4268587903926,19.6201490635663,31.4239784712378,7.34118465150814,7.27268281918851,6.97072548393047,8.31726497692862,7.23531479257251,10.9489116266011,10.3570609482292,11.6737363278025,11.2570179407113,24.4405951096503,19.7234702264307,19.3463357331028,20.2063102357689,22.7834715172828,27.9817242390753,36.9506380333209,9.85355341206521,11.5705133273838,8.14776411720903,10.3263709246941,13.5680068527871,19.5195785526531,24.7819732779405,16.5516901311501,23.6967217924189,22.1642128433907,31.6256197401374,26.420802225482,36.7408608797039,19.6028669121054,15.2293591469239,6.39293554924747,5.51873492609465,116.238627151161,105.021671186614,12.131185957874,11.8661335786055,12.6203287766503,16.0079885161622,16.5876016254255,11.4705023017225,11.8083297263669,15.286132662597,11.7395103485719,13.7360253218317,15.4162233399144,104.750749153509,14.9037089468682,16.2039699337202,15.4742611385897,20.6212653715669,7.96470830039777,11.6534705354391,8.46505959501303,10.3732793865744,10.335566250827,14.4494519533646,19.898978573953,15.2684166380552,12.83390562185,10.4292130118819,6.32511651449993,8.25084345985495,73.875394448572,15.665315180724,22.120334926851,27.0064664139806,31.2118811210402,31.0361742627603,41.4663531917345,51.4545764003673,27.6912615515178,40.2480934641258,47.6341339798718,10.8824926941377,10.8181165886257,9.04693873922338,9.54978752025092,8.53532678674319,13.9910801582328,107.917525770117,15.036637510211,11.3512777379772,11.6672552242918,9.23005439322986,8.20165366326151,11.8964650067392,12.918360679533,10.636310376598,13.681797406638,17.184071124272,12.811607740036,11.7925290933572,9.72048067396211,9.40897332065109,9.17122767733946,9.71023293970709,12.7286321817017,16.4906243449939,25.663764711775,17.3975007664339,7.32800820289447,10.4661582230785,12.0784698033681,12.444876054019,13.0451421712508,12.6717094118084,15.256441023948,16.1453437206498,18.5601039633508,14.4950472495604,12.0972602628303,22.1207784439725,10.9471616256689,10.1683847593179,12.9920822977795,18.7978030450856,22.4509930902829,23.6785035554339,18.4611908968222,18.5778267904592,22.70962838319,23.2908487666102,20.7585285975673,23.956748568442,27.3491951104871,13.1503622496823,7.99149432146633,7.89481938163386,6.88326927092722,35.546885301923,22.709579529593,12.0880072016395,12.2189976075068,30.5958983461572,65.5112137435797,63.9852078744976,61.2998199380154,72.5220429490362,80.8397373329358,80.827147020698,94.5031500324528,76.1042833448933,89.2690545698883,84.9126911272985,8.71813719707084,11.1726964552289,14.6830900948555,12.8846560046196,12.5767897576789,11.0306105070008,13.7792971237001,12.3621034343337,13.7995260124481,14.9091354940641,12.1670063947315,15.6559863350443,14.0462261204824,17.9910678257683,16.3116731833942,16.1939855036245,18.1938391733423,17.1689206212697,16.4834360321323,13.8366984926333,14.057639347802,13.665637074269,17.6442780561018,14.2439488299682,18.7277667026508,14.8075563810434,15.7318056670584,13.9426947062057,15.0742566368907,15.1508413347589,15.5411873742668,13.8891320149544,19.2338590289754,14.0992525479229,14.0821826016233,17.7365510335942,16.3752125911786,13.5368764050428,18.363679878609,16.9855392722027,15.9988806578091
|short_description=p1@Cds2
|short_description=p1@Cds2
}}
}}

Latest revision as of 18:44, 25 September 2015

Short description:p1@Cds2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cds2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000103181, ENSMUST00000110158, ENSMUST00000147456, NM_138651, uc008mmn.1, uc008mmo.1_5end
EntrezGene:Cds2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cds2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G721.30
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I617.29
CD326+ enterocyte, pool1.CNhs13542.11848-124I328.13
CD326+ enterocyte, pool2.CNhs13197.11849-124I429.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.25
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I811.68
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E932.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E712.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.24
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.90
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.21
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E426.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E825.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.53
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A225.55
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A429.21
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A623.77
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A337.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.05
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.70
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D215.83
GP2+ M cell, pool1.CNhs13228.11845-124H917.80
GP2+ M cell, pool2.CNhs13231.11846-124I114.22
GP2+ M cell, pool3.CNhs13240.11847-124I212.93
Ileum epithelium, pool1.CNhs13199.10252-104B917.10
Ileum epithelium, pool2.CNhs13232.10253-104C113.11
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C812.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I314.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G619.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.71
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F612.14
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F712.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G866.55
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H139.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H340.31
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G972.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H271.04
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H461.66
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D914.90
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B318.17
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.30
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B823.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C328.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.02
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A227.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I935.54
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A136.30
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.61
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C516.50
Mouse Granule cells, donor1.CNhs12131.11713-123C344.31
Mouse Granule cells, donor2.CNhs12357.11731-123E343.38
Mouse Granule cells, donor3.CNhs12108.11636-122C755.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C615.93
Mouse Meningeal cells, donor3.CNhs12109.11639-122D114.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C714.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E718.79
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D217.76
Mouse Microglia, donor1.CNhs12629.11718-123C817.98
Mouse Microglia, donor2.CNhs12634.11736-123E818.44
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D522.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F521.06
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D926.50
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F173.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D565.82
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D220.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F227.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D621.14
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3101.31
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3136.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7130.87
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D444.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F450.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D834.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4128.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5157.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6147.30
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D663.05
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F657.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E151.26
Mouse Schwann, donor1.CNhs12507.11728-123D919.01
Mouse Schwann, donor2.CNhs12573.11746-123F926.37
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G338.55
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F737.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C414.96
Mouse hepatocyte, donor3.CNhs12615.11637-122C812.41
Mouse hepatocyte, donor6.CNhs13090.11822-124F435.09
Mouse hepatocyte, donor8.CNhs13091.11824-124F630.91
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I713.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I816.61
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.89
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H120.53
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B678.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G117.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G220.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G316.68
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B621.58
accessory axillary lymph node, adult.CNhs10475.1063-29H917.35
adrenal gland, adult.CNhs10508.49-24D730.73
adrenal gland, embryo E14.CNhs11038.406-44C514.57
adrenal gland, embryo E16.CNhs11004.1254-43D69.74
adrenal gland, embryo E17.CNhs11043.1263-45I113.84
adrenal gland, embryo E18.CNhs11026.1262-18F522.61
adrenal gland, neonate N00.CNhs11191.1311-23C121.99
adrenal gland, neonate N25.CNhs11223.1377-27I320.48
amnion, adult pregnant day17.5.CNhs10488.583-22A841.03
aorta, adult.CNhs10498.46-23H117.79
bone (os femoris), adult.CNhs10483.56-12G224.77
bone (os femoris), neonate N02.CNhs11227.1985-43F511.16
bone (os femoris), neonate N16.CNhs11225.1525-43A611.26
bone (os femoris), neonate N20.CNhs11195.1350-25C39.21
cecum, adult.CNhs10467.37-13H420.50
cerebellum, adult.CNhs10494.15-8B288.13
cerebellum, neonate N30.CNhs11135.1395-42I2103.47
colon, adult.CNhs10468.36-18H711.24
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.43
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.85
corpora quadrigemina, adult.CNhs10501.16-22A4125.52
corpus striatum, adult.CNhs10487.19-21D8109.34
corpus striatum, neonate N00.CNhs11226.630-43F137.82
cortex, adult.CNhs10473.12-14D5115.42
cortex, neonate N30.CNhs11107.1392-42F2112.00
diencephalon, adult.CNhs10482.20-12F2133.19
diencephalon, neonate N30.CNhs11201.1388-42B2109.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.67
epididymis, adult.CNhs10490.58-23B221.23
eyeball, adult.CNhs10484.31-12G459.34
eyeball, embryo E12.CNhs11016.345-16C613.79
eyeball, embryo E14.CNhs10521.399-16E214.71
eyeball, embryo E15.CNhs10593.426-16C916.39
eyeball, embryo E17.CNhs11023.1261-18D415.37
eyeball, neonate N00.CNhs11207.633-15C620.55
eyeball, neonate N01.CNhs11140.1532-43E720.50
eyeball, neonate N02.CNhs11205.1551-44G821.65
eyeball, neonate N16.CNhs11188.777-19A246.83
forelimb, embryo E11.CNhs10596.335-25E214.87
forelimb, embryo E12.CNhs10600.359-14H214.94
forelimb, embryo E13.CNhs10589.384-1E210.38
forelimb, embryo E14.CNhs10577.413-26A89.64
forelimb, embryo E15.CNhs11007.437-20E711.12
forelimb, embryo E17.CNhs10598.1517-43C48.71
forelimb, embryo E18.CNhs11008.1520-43B59.26
gonad, embryo E13.CNhs11044.1564-45I615.13
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.40
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.09
heart, embryo E11.CNhs10586.331-24E99.53
heart, embryo E12.CNhs11015.353-12F57.27
heart, embryo E13.CNhs11013.376-3I912.60
heart, embryo E14.CNhs10597.403-26D413.26
heart, embryo E15.CNhs11017.431-16C813.97
heart, embryo E16.CNhs11021.457-17C618.97
heart, embryo E17.CNhs11025.479-18E519.53
heart, embryo E18.CNhs11030.1283-20G324.14
heart, neonate N00.CNhs11213.639-21E328.72
heart, neonate N03.CNhs11221.1349-25I223.20
heart, neonate N10.CNhs11118.749-24G122.00
heart, neonate N16.CNhs11209.782-15G130.64
heart, neonate N20.CNhs11127.821-26I630.12
heart, neonate N25.CNhs11196.1351-25D327.22
heart, neonate N30.CNhs11202.1390-42D232.61
hippocampus, adult.CNhs10478.13-16E8111.87
hippocampus, neonate N00.CNhs11228.627-43G127.89
intestinal mucosa, adult.CNhs10506.860-29I313.55
intestine, adult.CNhs10496.178-9A38.99
intestine, embryo E12.CNhs11019.1251-16I511.73
intestine, embryo E13.CNhs11010.381-16D512.77
intestine, embryo E15.CNhs10602.976-16D812.50
intestine, embryo E16.CNhs10585.463-22H412.10
intestine, embryo E17.CNhs10582.482-18D310.01
intestine, embryo E18.CNhs10526.1289-20F711.03
intestine, neonate N00.CNhs11126.644-26D116.13
intestine, neonate N01.CNhs11192.1322-23E913.01
intestine, neonate N06.CNhs11102.688-20B814.33
intestine, neonate N07.CNhs11095.720-20F210.74
intestine, neonate N10.CNhs11098.755-23A512.28
intestine, neonate N20.CNhs11187.827-18D117.08
intestine, neonate N25.CNhs11121.1352-25E313.62
intestine, neonate N30.CNhs11131.1384-42G113.94
kidney, embryo E14.CNhs10606.411-4I911.00
kidney, embryo E15.CNhs10997.434-16F813.48
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I213.85
kidney, embryo E18.CNhs11001.1288-20C714.35
kidney, neonate N00.CNhs11214.646-21G716.06
kidney, neonate N10.CNhs11206.758-6D517.71
kidney, neonate N20.CNhs11113.832-19I119.93
kidney, neonate N25.CNhs11122.1353-25F317.43
kidney, neonate N30.CNhs11203.1385-42H119.62
liver, adult pregnant day01.CNhs10466.508-5B231.42
liver, embryo E12.CNhs10601.355-15F87.34
liver, embryo E13.CNhs10524.378-3H67.27
liver, embryo E14.CNhs10594.409-16E16.97
liver, embryo E15.CNhs10520.433-16D78.32
liver, embryo E16.CNhs10523.462-17F57.24
liver, embryo E17.CNhs10510.481-18A310.95
liver, embryo E18.CNhs10579.499-43G410.36
liver, neonate N00.CNhs11117.641-24F411.67
liver, neonate N03.CNhs11123.1345-25G211.26
liver, neonate N06.CNhs11101.684-20A824.44
liver, neonate N07.CNhs11103.716-20H219.72
liver, neonate N10.CNhs11115.751-24B919.35
liver, neonate N20.CNhs11220.823-25A320.21
liver, neonate N25.CNhs11198.1368-26H122.78
liver, neonate N30.CNhs11106.1382-42D127.98
lung, adult.CNhs10474.28-22B136.95
lung, embryo E12.CNhs10522.354-16G29.85
lung, embryo E14.CNhs10604.404-26F811.57
lung, embryo E15.CNhs11020.432-17C58.15
lung, embryo E16.CNhs10998.458-17B610.33
lung, embryo E17.CNhs10605.480-44A613.57
lung, embryo E18.CNhs10583.1287-20I619.52
lung, neonate N00.CNhs11224.640-42C624.78
lung, neonate N06.CNhs11212.683-20E516.55
lung, neonate N07.CNhs11111.715-19A323.70
lung, neonate N10.CNhs11219.750-23E622.16
lung, neonate N20.CNhs11109.822-18A431.63
lung, neonate N25.CNhs11119.1359-25C726.42
lung, neonate N30.CNhs11133.1394-42H236.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A119.60
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A115.23
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H25.52
medulla oblongata, adult.CNhs10477.17-12C2116.24
medulla oblongata, neonate N30.CNhs11200.1396-42A3105.02
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C712.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C211.87
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.62
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.01
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.47
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.81
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.29
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.74
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.42
olfactory brain, adult.CNhs10489.18-22I9104.75
ovary, adult.CNhs10507.91-2I714.90
ovary, embryo E18.CNhs11040.505-44H716.20
ovary, neonate N00.CNhs11217.1299-22I415.47
oviduct, adult pregnant day01.CNhs10500.988-6G620.62
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F411.65
pancreas, embryo E15.CNhs11042.1556-45F28.47
pancreas, embryo E16.CNhs11003.460-26E510.37
pancreas, embryo E17.CNhs10599.1558-45G310.34
pancreas, embryo E18.CNhs10580.1535-43I714.45
pancreas, neonate N00.CNhs11105.645-26G919.90
pancreas, neonate N01.CNhs11138.1531-43D715.27
pancreas, neonate N02.CNhs11139.1539-43D812.83
pancreas, neonate N16.CNhs11136.787-43B610.43
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G873.88
pituitary gland, embryo E12.CNhs11018.346-16E615.67
pituitary gland, embryo E13.CNhs11009.370-44C722.12
pituitary gland, embryo E14.CNhs11037.398-44A527.01
pituitary gland, embryo E15.CNhs10592.427-16B931.21
pituitary gland, embryo E16.CNhs11036.449-43F631.04
pituitary gland, embryo E17.CNhs11039.1265-44F541.47
pituitary gland, neonate N00.CNhs11190.1308-22E951.45
placenta, adult pregnant day10.CNhs10472.539-13I727.69
placenta, adult pregnant day17.CNhs10464.577-18G340.25
prostate, adult.CNhs10470.859-1F847.63
skin, adult.CNhs10492.30-1C310.88
skin, neonate N00.CNhs11124.650-25G410.82
skin, neonate N03.CNhs11215.662-22H39.05
skin, neonate N06.CNhs11097.693-20I59.55
skin, neonate N10.CNhs11108.762-6C48.54
small intestine, neonate N16.CNhs11114.790-21I113.99
spinal cord, adult.CNhs10505.24-13C9107.92
spleen, adult.CNhs10465.25-2G215.04
spleen, embryo E16.CNhs11035.461-43C111.35
spleen, embryo E18.CNhs11011.1271-21F211.67
spleen, neonate N10.CNhs11116.752-24D19.23
spleen, neonate N20.CNhs11112.824-19H18.20
spleen, neonate N25.CNhs11099.1354-25G311.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C612.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D313.68
stomach, adult.CNhs10503.33-1H617.18
stomach, embryo E12.CNhs10588.356-43E312.81
stomach, embryo E15.CNhs10603.1252-16G811.79
stomach, embryo E16.CNhs11022.459-17D49.72
stomach, embryo E17.CNhs11006.1035-18D59.41
stomach, embryo E18.CNhs10999.1286-20C69.17
stomach, neonate N03.CNhs11193.1340-24B89.71
stomach, neonate N07.CNhs11210.718-18A912.73
stomach, neonate N25.CNhs11104.1355-25E416.49
stomach, neonate N30.CNhs11134.1386-42I125.66
submandibular gland, adult.CNhs10469.59-29C117.40
testis, adult.CNhs10504.57-7G57.33
testis, embryo E13.CNhs11031.389-23F510.47
testis, embryo E15.CNhs11034.443-27C512.08
testis, embryo E16.CNhs11033.470-26G512.44
testis, embryo E17.CNhs11029.486-18I513.05
testis, embryo E18.CNhs11027.503-18G512.67
testis, neonate N00.CNhs11189.1300-22B715.26
testis, neonate N07.CNhs11222.726-26I416.15
testis, neonate N10.CNhs11204.763-44D918.56
testis, neonate N20.CNhs11110.839-18H314.50
testis, neonate N30.CNhs11130.1391-42E212.10
thymus, adult.CNhs10471.38-12B522.12
thymus, embryo E14.CNhs11041.402-44I410.95
thymus, embryo E15.CNhs11005.430-45I210.17
thymus, embryo E16.CNhs11002.456-26C512.99
thymus, embryo E17.CNhs10581.478-18C118.80
thymus, embryo E18.CNhs10595.1273-19G422.45
thymus, neonate N02.CNhs11181.1541-43F823.68
thymus, neonate N03.CNhs11137.2104-43C718.46
thymus, neonate N06.CNhs11197.681-26C418.58
thymus, neonate N07.CNhs11211.713-19D322.71
thymus, neonate N10.CNhs11194.748-24E423.29
thymus, neonate N20.CNhs11186.820-7A220.76
thymus, neonate N25.CNhs11125.1362-25G723.96
thymus, neonate N30.CNhs11132.1393-42G227.35
tongue, adult.CNhs10499.32-1B413.15
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.89
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.88
urinary bladder, adult.CNhs10481.879-12E435.55
uterus, adult pregnant day19.CNhs10497.590-15F522.71
uterus, adult.CNhs10509.92-27E512.09
vagina, adult.CNhs10502.89-27D512.22
vesicular gland, adult.CNhs10491.51-27F830.60
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A165.51
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A263.99
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A361.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D772.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A480.84
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A580.83
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A694.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A776.10
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A889.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A984.91
whole body, embryo E11.CNhs11014.324-5I88.72
whole body, embryo E12.CNhs10587.857-27C911.17
whole body, embryo E13.CNhs10512.372-23H214.68
whole body, embryo E14.5.CNhs10578.420-27D212.88
whole body, embryo E14.CNhs10519.395-14B112.58
whole body, embryo E16.CNhs10514.453-14F211.03
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.80
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.91
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.17
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.05
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.99
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G516.31
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.19
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G517.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.84
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.64
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.24
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.81
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G515.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.15
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G519.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G514.10
whole body, embryo E17.5.CNhs10513.490-9F914.08
whole body, embryo E17.CNhs10517.475-3I517.74
whole body, embryo E18.CNhs10516.493-3B316.38
whole body, neonate N00.CNhs10525.657-19C213.54
whole body, neonate N01.CNhs10576.659-23C618.36
whole body, neonate N06.CNhs10515.692-21D116.99
whole body, neonate N10.CNhs10518.761-6B416.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.38e-1023
neuroblast (sensu Vertebrata)1.38e-1023

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.06e-2354
neural tube1.44e-2152
neural rod1.44e-2152
future spinal cord1.44e-2152
neural keel1.44e-2152
nervous system1.53e-2075
central nervous system3.14e-2073
neurectoderm3.84e-2064
neural plate3.84e-2064
presumptive neural plate3.84e-2064
brain8.02e-1947
future brain8.02e-1947
regional part of brain3.52e-1846
structure with developmental contribution from neural crest1.29e-1792
anterior neural tube2.61e-1740
pre-chordal neural plate8.02e-1749
regional part of forebrain1.27e-1639
forebrain1.27e-1639
future forebrain1.27e-1639
gray matter8.38e-1634
ectoderm-derived structure1.87e-1595
ectoderm1.87e-1595
presumptive ectoderm1.87e-1595
anatomical conduit2.93e-14122
ecto-epithelium3.79e-1473
tube1.53e-13114
brain grey matter3.07e-1329
regional part of telencephalon3.07e-1329
telencephalon3.07e-1329
epithelium3.26e-11174
cell layer4.37e-11176
cerebral cortex5.33e-0921
cerebral hemisphere5.33e-0921
pallium5.33e-0921
regional part of cerebral cortex4.45e-0817
occipital lobe8.53e-0710
visual cortex8.53e-0710
neocortex8.53e-0710
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