FFCP PHASE1:Mm9::chr3:86724410..86724457,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=70762|HGNC=|MCL_coexpression_id=4|UniProt=Q6PGN3|association_with_transcript=-153bp_to_ENSMUST00000098983_5end|description=CAGE_peak_3_at_Dclk2_5end|id=chr3:86724410..86724457,-|ontology_enrichment_celltype=CL:0000540!1.16e-10!33;CL:0000047!1.16e-10!33;CL:0000031!1.16e-10!33;CL:0000404!1.16e-10!33;CL:0000117!4.32e-10!23;CL:0000337!4.32e-10!23;CL:0000221!5.24e-09!44;CL:0000133!5.24e-09!44;CL:0002319!1.34e-08!43;CL:0000393!3.78e-08!39;CL:0000211!3.78e-08!39|ontology_enrichment_celltype_v019_2=CL:0000540,4.41e-09,33;CL:0000047,4.41e-09,33;CL:0000031,4.41e-09,33;CL:0000404,4.41e-09,33;CL:0000117,4.79e-09,23;CL:0000337,4.79e-09,23;CL:0000221,2.24e-07,44;CL:0000133,2.24e-07,44;CL:0000393,5.48e-07,39;CL:0000211,5.48e-07,39;CL:0002319,9.01e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!1.39e-16!86;UBERON:0000153!4.67e-15!94;UBERON:0004121!3.75e-12!102;UBERON:0000924!3.75e-12!102;UBERON:0006601!3.75e-12!102;UBERON:0000073!2.07e-11!75;UBERON:0001016!2.07e-11!75;UBERON:0001017!8.46e-11!73;UBERON:0005743!8.46e-11!73;UBERON:0002346!1.83e-09!71;UBERON:0003075!1.83e-09!71;UBERON:0007284!1.83e-09!71;UBERON:0000033!5.60e-09!63;UBERON:0003408!1.70e-08!24;UBERON:0002370!2.20e-08!23;UBERON:0000974!2.20e-08!23;UBERON:0004807!2.20e-08!23;UBERON:0005058!2.20e-08!23;UBERON:0003351!2.20e-08!23;UBERON:0009113!2.20e-08!23;UBERON:0003295!2.20e-08!23;UBERON:0009722!2.20e-08!23;UBERON:0005562!2.20e-08!23;UBERON:0007690!2.20e-08!23;UBERON:0006562!2.52e-08!24;UBERON:0001557!2.52e-08!24;UBERON:0001042!2.52e-08!24;UBERON:0008814!2.52e-08!24;UBERON:0009145!2.52e-08!24;UBERON:0004177!4.42e-08!29;UBERON:0001049!1.14e-07!52;UBERON:0005068!1.14e-07!52;UBERON:0006241!1.14e-07!52;UBERON:0007135!1.14e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0007811,2.35e-16,36;UBERON:0002370,5.05e-16,23;UBERON:0000974,5.05e-16,23;UBERON:0004807,5.05e-16,23;UBERON:0005058,5.05e-16,23;UBERON:0003351,5.05e-16,23;UBERON:0009113,5.05e-16,23;UBERON:0003295,5.05e-16,23;UBERON:0009722,5.05e-16,23;UBERON:0005562,5.05e-16,23;UBERON:0007690,5.05e-16,23;UBERON:0006562,3.89e-15,24;UBERON:0003408,3.89e-15,24;UBERON:0001557,3.89e-15,24;UBERON:0001042,3.89e-15,24;UBERON:0008814,3.89e-15,24;UBERON:0009145,3.89e-15,24;UBERON:0000072,7.02e-13,27;UBERON:0000153,1.41e-12,43;UBERON:0004177,1.21e-11,29;UBERON:0005057,1.21e-11,29;UBERON:0002193,5.83e-10,48;UBERON:0002405,5.83e-10,48;UBERON:0002390,8.92e-10,45;UBERON:0003061,8.92e-10,45;UBERON:0000077,8.31e-09,35;UBERON:0000065,9.61e-09,41;UBERON:0001004,2.07e-08,42;UBERON:0004121,1.60e-07,95;UBERON:0000924,1.60e-07,95;UBERON:0006601,1.60e-07,95;UBERON:0001948,7.27e-07,5;UBERON:0002315,7.27e-07,5;UBERON:0001016,7.47e-07,75|phase1_expression=0.480446541314382,0,0,0,0,0,0,7.48915275961142,0,1.17032263160997,0.513653904676515,0.797721589953364,1.02720437958723,3.67165690159789,0.666219523631325,1.01237633694913,0,2.68142840554502,3.70208970735495,5.09267582157636,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0.183546752161682,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,3.18786951509699,0,0.336093799142464,0,0,0,4.24864567805155,2.64495489636016,5.07065122804943,0,0,0,0.988866362566974,0,0.299600110518405,0.768436610643109,0.622137673850866,1.21505344498522,0.841299845405528,2.28520787523043,1.76694832761291,2.44981598429908,3.54628242767475,0.919218786610021,1.10115880999389,0.766124028511126,0.768032666281217,2.37395317914349,4.11694396210843,0.52091337055676,0.558365998002762,0.56276261003168,0.916789486660861,2.06240009831567,1.13897344639282,3.35519002485541,1.28734528666413,0.68014404096107,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,1.26759077799012,0,2.54805239706646,0,0,0,0,0.45673551887624,4.66088190564909,0.445326417194474,0.173485326766136,0.304465478312141,0.461230994512117,0.301445281105245,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0,0,0,1.17112318804619,1.67557365450764,0.255457055208591,0.239630249011841,0,0.381210681219194,0.748953197024114,0.915001205637253,3.39266750704734,0.869121600961382,1.02286182932132,1.24672826735736,1.29793010454206,0.203678727700633,0.373220911830279,0,0,0.260240885925407,1.14951052216736,0.720248519221397,1.20563854268572,1.97305847538851,1.66547836370305,2.24884138943349,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0.995171334092466,0,0.257347907114715,0.284163499395593,0,0,0.180062061461015,0,0,0,0.232533944750408,0.268273401399619,0,0.329119699826961,0,0.0810688095458557,0.292399974850665,0.439100230582101,0.134206418760372,0,1.64647379806855,0.330418782983798,0,0,0.464473343720877,0,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0.228497025219458,1.1270773567308,0.203651327845314,0,0.280543279561274,0.189709611372772,0.295220295959204,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0.50925170356284,0,0,0.274561413188081,0,0.744281895337007,0,0,0,0.482443521363367,0.369506380333209,0.568474235311454,0.162964976442026,0.848725428875941,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,1.26108115284953,0.44292937929755,1.2756381492599,0.327726629431476,0.863424909329478,0,0,0,0.491764273019036,0.275936746304732,0.80275294993896,0.820481806145422,0,0,0.315508219416257,0.780877488593277,1.29254038639679,0.477937595905104,0,1.13230612315533,0.404810701674894,1.16902343164525,1.18586333383957,2.89189184779626,0,0.534196811001766,0.488660878060728,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,1.02131881726136,0.18006109403131,0.258717367565509,0.643011105094777,0,0.713475270408282,1.15184314421485,0.304464949114599,0,0,0,0.49465875882444,0.161464426695906,0.120625849856312,0,0.328281799490123,0,0.927126510052548,0.854354403989263,0,0.370389054739423,0.376736914009382,0.683471138605126,0.915112692826091,0.509935289981566,0.69975726161829,1.10559979043539,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0.436725127492355,0.269728692769641,0.0826534557253359,0,0.129614973291793,0.621339313086926,0.56369293868419,0.598066184175915,1.48912641411388,1.16670713006429,0.387479470433193,0.337912250981556,0.117357238645754,0.911430693907651,1.04859344425711,0.483168241652012,0.288030006257865,8.53230025696081,0.405450430580328,1.23253148597793,2.20865399062252,2.68540043501222,5.16571522431289,7.21172697119813,7.08909730437971,5.45218829719997,6.85861259894999,7.4611377001262,6.91950953252242,5.58028681513911,8.06450625052826,0.453460767230423,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0.460325236507177,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.31136204275253,1.59609949360412,0.512200817262403,0.243106717068294,0.209613162627982,0.183843508450014,0.666740183404846,0.618105171716683,0.320919209591815,0.505394423527595,0.760437899670719,0.754505365544305,0.749132059759059,0.448176066834085,0.516919220600519,0.476293691283074,0.347652977834566,0.38581844092741,0.824171801606613,0.294397840268795,0.685738504770831,0.70990322463735,0.715308569841963,0.581385666529314,0.752875043322645,0.761531471025089,0.548783918618318,0.526139422875686,0.679020569229309,0.561142271657738,0.830445126869219,0.985044823755635,0,0.309873682371932,0.385813221962283,1.49886346762768,0.233931608445408,0.214871054048298,0.57386499620653,0,0|short_description=p3@Dclk2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70762 | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PGN3 | |||
|association_with_transcript=-153bp_to_ENSMUST00000098983_5end | |||
|cluster_id=chr3:86724410..86724457,- | |||
|description=CAGE_peak_3_at_Dclk2_5end | |||
|id=chr3:86724410..86724457,- | |||
|ontology_enrichment_celltype=CL:0000540!1.16e-10!33;CL:0000047!1.16e-10!33;CL:0000031!1.16e-10!33;CL:0000404!1.16e-10!33;CL:0000117!4.32e-10!23;CL:0000337!4.32e-10!23;CL:0000221!5.24e-09!44;CL:0000133!5.24e-09!44;CL:0002319!1.34e-08!43;CL:0000393!3.78e-08!39;CL:0000211!3.78e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.41e-09,33;CL:0000047,4.41e-09,33;CL:0000031,4.41e-09,33;CL:0000404,4.41e-09,33;CL:0000117,4.79e-09,23;CL:0000337,4.79e-09,23;CL:0000221,2.24e-07,44;CL:0000133,2.24e-07,44;CL:0000393,5.48e-07,39;CL:0000211,5.48e-07,39;CL:0002319,9.01e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!1.39e-16!86;UBERON:0000153!4.67e-15!94;UBERON:0004121!3.75e-12!102;UBERON:0000924!3.75e-12!102;UBERON:0006601!3.75e-12!102;UBERON:0000073!2.07e-11!75;UBERON:0001016!2.07e-11!75;UBERON:0001017!8.46e-11!73;UBERON:0005743!8.46e-11!73;UBERON:0002346!1.83e-09!71;UBERON:0003075!1.83e-09!71;UBERON:0007284!1.83e-09!71;UBERON:0000033!5.60e-09!63;UBERON:0003408!1.70e-08!24;UBERON:0002370!2.20e-08!23;UBERON:0000974!2.20e-08!23;UBERON:0004807!2.20e-08!23;UBERON:0005058!2.20e-08!23;UBERON:0003351!2.20e-08!23;UBERON:0009113!2.20e-08!23;UBERON:0003295!2.20e-08!23;UBERON:0009722!2.20e-08!23;UBERON:0005562!2.20e-08!23;UBERON:0007690!2.20e-08!23;UBERON:0006562!2.52e-08!24;UBERON:0001557!2.52e-08!24;UBERON:0001042!2.52e-08!24;UBERON:0008814!2.52e-08!24;UBERON:0009145!2.52e-08!24;UBERON:0004177!4.42e-08!29;UBERON:0001049!1.14e-07!52;UBERON:0005068!1.14e-07!52;UBERON:0006241!1.14e-07!52;UBERON:0007135!1.14e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007811,2.35e-16,36;UBERON:0002370,5.05e-16,23;UBERON:0000974,5.05e-16,23;UBERON:0004807,5.05e-16,23;UBERON:0005058,5.05e-16,23;UBERON:0003351,5.05e-16,23;UBERON:0009113,5.05e-16,23;UBERON:0003295,5.05e-16,23;UBERON:0009722,5.05e-16,23;UBERON:0005562,5.05e-16,23;UBERON:0007690,5.05e-16,23;UBERON:0006562,3.89e-15,24;UBERON:0003408,3.89e-15,24;UBERON:0001557,3.89e-15,24;UBERON:0001042,3.89e-15,24;UBERON:0008814,3.89e-15,24;UBERON:0009145,3.89e-15,24;UBERON:0000072,7.02e-13,27;UBERON:0000153,1.41e-12,43;UBERON:0004177,1.21e-11,29;UBERON:0005057,1.21e-11,29;UBERON:0002193,5.83e-10,48;UBERON:0002405,5.83e-10,48;UBERON:0002390,8.92e-10,45;UBERON:0003061,8.92e-10,45;UBERON:0000077,8.31e-09,35;UBERON:0000065,9.61e-09,41;UBERON:0001004,2.07e-08,42;UBERON:0004121,1.60e-07,95;UBERON:0000924,1.60e-07,95;UBERON:0006601,1.60e-07,95;UBERON:0001948,7.27e-07,5;UBERON:0002315,7.27e-07,5;UBERON:0001016,7.47e-07,75 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,7.48915275961142,0,1.17032263160997,0.513653904676515,0.797721589953364,1.02720437958723,3.67165690159789,0.666219523631325,1.01237633694913,0,2.68142840554502,3.70208970735495,5.09267582157636,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0.183546752161682,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,3.18786951509699,0,0.336093799142464,0,0,0,4.24864567805155,2.64495489636016,5.07065122804943,0,0,0,0.988866362566974,0,0.299600110518405,0.768436610643109,0.622137673850866,1.21505344498522,0.841299845405528,2.28520787523043,1.76694832761291,2.44981598429908,3.54628242767475,0.919218786610021,1.10115880999389,0.766124028511126,0.768032666281217,2.37395317914349,4.11694396210843,0.52091337055676,0.558365998002762,0.56276261003168,0.916789486660861,2.06240009831567,1.13897344639282,3.35519002485541,1.28734528666413,0.68014404096107,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,1.26759077799012,0,2.54805239706646,0,0,0,0,0.45673551887624,4.66088190564909,0.445326417194474,0.173485326766136,0.304465478312141,0.461230994512117,0.301445281105245,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0,0,0,1.17112318804619,1.67557365450764,0.255457055208591,0.239630249011841,0,0.381210681219194,0.748953197024114,0.915001205637253,3.39266750704734,0.869121600961382,1.02286182932132,1.24672826735736,1.29793010454206,0.203678727700633,0.373220911830279,0,0,0.260240885925407,1.14951052216736,0.720248519221397,1.20563854268572,1.97305847538851,1.66547836370305,2.24884138943349,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0.995171334092466,0,0.257347907114715,0.284163499395593,0,0,0.180062061461015,0,0,0,0.232533944750408,0.268273401399619,0,0.329119699826961,0,0.0810688095458557,0.292399974850665,0.439100230582101,0.134206418760372,0,1.64647379806855,0.330418782983798,0,0,0.464473343720877,0,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0.228497025219458,1.1270773567308,0.203651327845314,0,0.280543279561274,0.189709611372772,0.295220295959204,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0.50925170356284,0,0,0.274561413188081,0,0.744281895337007,0,0,0,0.482443521363367,0.369506380333209,0.568474235311454,0.162964976442026,0.848725428875941,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,1.26108115284953,0.44292937929755,1.2756381492599,0.327726629431476,0.863424909329478,0,0,0,0.491764273019036,0.275936746304732,0.80275294993896,0.820481806145422,0,0,0.315508219416257,0.780877488593277,1.29254038639679,0.477937595905104,0,1.13230612315533,0.404810701674894,1.16902343164525,1.18586333383957,2.89189184779626,0,0.534196811001766,0.488660878060728,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,1.02131881726136,0.18006109403131,0.258717367565509,0.643011105094777,0,0.713475270408282,1.15184314421485,0.304464949114599,0,0,0,0.49465875882444,0.161464426695906,0.120625849856312,0,0.328281799490123,0,0.927126510052548,0.854354403989263,0,0.370389054739423,0.376736914009382,0.683471138605126,0.915112692826091,0.509935289981566,0.69975726161829,1.10559979043539,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0.436725127492355,0.269728692769641,0.0826534557253359,0,0.129614973291793,0.621339313086926,0.56369293868419,0.598066184175915,1.48912641411388,1.16670713006429,0.387479470433193,0.337912250981556,0.117357238645754,0.911430693907651,1.04859344425711,0.483168241652012,0.288030006257865,8.53230025696081,0.405450430580328,1.23253148597793,2.20865399062252,2.68540043501222,5.16571522431289,7.21172697119813,7.08909730437971,5.45218829719997,6.85861259894999,7.4611377001262,6.91950953252242,5.58028681513911,8.06450625052826,0.453460767230423,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0.460325236507177,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.31136204275253,1.59609949360412,0.512200817262403,0.243106717068294,0.209613162627982,0.183843508450014,0.666740183404846,0.618105171716683,0.320919209591815,0.505394423527595,0.760437899670719,0.754505365544305,0.749132059759059,0.448176066834085,0.516919220600519,0.476293691283074,0.347652977834566,0.38581844092741,0.824171801606613,0.294397840268795,0.685738504770831,0.70990322463735,0.715308569841963,0.581385666529314,0.752875043322645,0.761531471025089,0.548783918618318,0.526139422875686,0.679020569229309,0.561142271657738,0.830445126869219,0.985044823755635,0,0.309873682371932,0.385813221962283,1.49886346762768,0.233931608445408,0.214871054048298,0.57386499620653,0,0 | |||
|short_description=p3@Dclk2 | |||
}} |
Latest revision as of 18:55, 25 September 2015
Short description: | p3@Dclk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dclk2_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | -153bp_to_ENSMUST00000098983_5end |
EntrezGene: | Dclk2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.41e-09 | 33 |
neuronal stem cell | 4.41e-09 | 33 |
neuroblast | 4.41e-09 | 33 |
electrically signaling cell | 4.41e-09 | 33 |
CNS neuron (sensu Vertebrata) | 4.79e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.79e-09 | 23 |
ectodermal cell | 2.24e-07 | 44 |
neurectodermal cell | 2.24e-07 | 44 |
electrically responsive cell | 5.48e-07 | 39 |
electrically active cell | 5.48e-07 | 39 |
neural cell | 9.01e-07 | 43 |