FFCP PHASE1:Mm9::chr16:84835570..84835584,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:84835570..84835584,+
|short_description=p4@Gabpa
|description=CAGE_peak_4_at_Gabpa_5end
|association_with_transcript=201bp_to_ENSMUST00000009120,NM_008065...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14390 | |EntrezGene=14390 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q00422 | |UniProt=Q00422 | ||
|association_with_transcript=201bp_to_ENSMUST00000009120,NM_008065,uc007ztk.1,uc007ztl.1_5end | |||
|cluster_id=chr16:84835570..84835584,+ | |||
|description=CAGE_peak_4_at_Gabpa_5end | |||
|id=chr16:84835570..84835584,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003929!1.63e-11!55;UBERON:0002405!3.26e-11!70;UBERON:0005911!4.16e-10!69;UBERON:0005057!6.30e-10!51;UBERON:0000490!4.67e-09!66;UBERON:0001007!8.33e-09!128;UBERON:0001555!8.33e-09!128;UBERON:0007026!8.33e-09!128;UBERON:0004119!1.16e-08!130;UBERON:0000925!1.16e-08!130;UBERON:0006595!1.16e-08!130;UBERON:0004921!2.24e-08!126;UBERON:0004185!2.24e-08!126;UBERON:0002193!3.92e-07!48;UBERON:0003408!7.83e-07!24;UBERON:0006562!9.98e-07!24;UBERON:0001557!9.98e-07!24;UBERON:0001042!9.98e-07!24;UBERON:0008814!9.98e-07!24;UBERON:0009145!9.98e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003929,1.19e-11,55;UBERON:0005911,3.19e-10,69;UBERON:0000490,2.86e-09,66;UBERON:0001007,8.15e-09,116;UBERON:0001555,8.15e-09,116;UBERON:0007026,8.15e-09,116;UBERON:0004119,1.18e-08,118;UBERON:0000925,1.18e-08,118;UBERON:0006595,1.18e-08,118;UBERON:0004921,2.20e-08,114;UBERON:0002193,3.57e-07,48;UBERON:0002405,3.57e-07,48;UBERON:0003408,7.46e-07,24;UBERON:0006562,9.52e-07,24;UBERON:0001557,9.52e-07,24;UBERON:0001042,9.52e-07,24;UBERON:0008814,9.52e-07,24;UBERON:0009145,9.52e-07,24 | |||
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| |phase1_expression=1.92178616525753,6.63053274514786,3.18499467572675,6.95667686005709,6.01074875935617,3.3575854382378,3.27057696833736,2.58246646883153,3.66050677594334,3.27690336850791,7.53359060192222,5.42450681168288,5.30722262786738,3.84649770643589,3.33109761815663,4.25198061518635,2.79824751251259,7.09789872056035,6.44437837946972,6.79023442876848,1.87095238332354,1.98581902401771,1.56719873483361,3.67982572424835,2.52350209173887,2.8711598205751,4.30761996159075,3.23206849028834,4.18051522804023,6.04872311423834,2.66076612786366,0.635030673459631,1.84519436275371,0,1.1554064790051,2.32728503501889,1.42918549383658,5.02237956884289,6.2506827561904,7.85285615960697,4.1176204162171,8.19654581950135,5.34061388334269,0.251793635951155,0.709638518536602,1.10128051297009,0,1.74420125104357,0.219686182734472,1.74986909166855,0.55994568650145,0,5.70460860596304,6.5282592781021,5.71359458542189,1.54355661621568,0,1.03134418455488,2.02316460859598,1.05798195854407,1.90149421051854,0,0,0,0.988866362566974,2.1314403448383,0.299600110518405,0.768436610643109,1.8664130215526,1.08004750665353,0.630974884054146,0.571301968807607,1.98781686856452,1.34739879136449,1.91690942036473,3.67687514644008,1.10115880999389,1.91531007127782,1.38245879930619,1.31886287730194,1.28082701043374,0.52091337055676,0.558365998002762,1.68828783009504,1.5279824777681,2.06240009831567,1.70846016958924,1.1183966749518,3.10477392666055,3.47629176491213,2.89864488701678,4.30211938490693,4.0798280022465,5.39703191637817,2.59910566979068,5.37632264516803,2.94933282276679,1.87473354835864,1.81850203222008,1.41335829804136,1.83096445709685,3.84979432242953,2.54805239706646,7.11066703153331,1.73192832808971,0.760079596425296,2.52762222507392,4.33898742932428,6.21450920753212,1.33597925158342,0.693941307064543,0.304465478312141,0.691846491768175,1.20578112442098,1.64624189989987,1.13099932196708,1.97755974187499,2.31358971071859,0.884610551949874,1.94120219936891,3.09178125844551,1.93950101254089,0,3.22058876712702,2.51336048176146,2.55457055208591,5.39168060276641,4.79922184794726,3.43089613097275,1.79748767285787,0.915001205637253,1.50785222535437,2.60736480288415,0.255715457330331,1.24672826735736,0.324482526135515,1.83310854930569,1.8661045591514,1.51633655060205,2.94618598241064,1.56144531555244,0.919608417733892,2.34080768746954,1.20563854268572,2.04109497453984,1.40925092313335,2.43624483855295,1.29351685369508,1.07783996466421,1.32374256117473,1.93546236580344,1.53437012699302,0.556094498451196,1.0447564995665,1.85203922767149,0.796137067273973,8.42655824775882,3.08817488537658,4.83077948972507,1.44988040774851,0.938104239924385,2.88099298337624,2.13070262026689,2.36117078096885,1.23413690309903,2.09280550275367,1.07309360559848,3.15266424391358,3.45575684818309,2.62667942526552,3.64809642956351,3.21639972335731,2.41505126820156,3.35516046900929,1.68231958851302,1.54356918568927,6.60837565967596,3.43785736662608,1.2797295032114,0.464473343720877,2.06187938115349,2.01683524623343,4.22518283305254,1.71203063501303,1.89811624617805,1.97638745668813,3.01602250560323,2.18852119245266,3.11942539390592,1.79763881730844,1.94524244887225,2.98711909881551,0.758671603812327,2.28497025219458,1.1270773567308,1.01825663922657,1.35766741017338,2.17421041659988,2.97211724484009,1.77132177575523,2.04098346193787,1.48076596706161,4.15033677922008,3.33690211432188,1.96558995113203,3.59779379815766,2.02860121388503,1.92941727801933,2.80088436959562,3.45235364940973,2.43202840162553,2.19649130550465,0,2.60498663367952,3.12037673114561,2.77836765741823,4.84373016509163,7.23665282045051,2.58654466233247,1.70542270593436,1.95557971730431,1.18821560042632,1.17345124144251,2.34508760418542,2.14239276797412,3.90267295715598,1.89162172927429,3.32197034473162,2.87018583583477,1.63863314715738,1.72684981865896,1.88043776155965,0,2.71952841909355,0.491764273019036,2.48343071674259,0.642202359951168,1.40654023910644,0.983609672260053,3.53459298086122,1.26203287766503,2.34263246577983,1.50796378412959,3.10659437338318,1.33679204449436,2.54768877709949,2.02405350837447,0.584511715822624,0,3.21321316421807,2.55492153374884,1.95872164033981,2.60619134965722,1.48473110675282,9.2921596837974,0.971122544619926,0.906970670894253,2.26326095707078,1.47650946440386,1.84461088766356,1.03371317267288,2.18120237686503,3.56497378384721,2.84433082142234,3.16255825724996,3.09406629744561,1.36175842301515,1.8006109403131,0.258717367565509,0.643011105094777,0.886701168211368,0.535106452806212,1.48094118541909,0.913394847343798,1.64270195644597,2.1183207086382,1.7642271844397,7.74965388824956,2.26050197374268,2.89502039655148,2.626191568069,3.28281799490123,1.1659233465194,1.11255181206306,2.39219233116994,0.82554747185289,2.22233432843654,2.26042148405629,2.87057878214153,2.74533807847827,3.56954702987096,3.49878630809145,3.73139929271944,1.90934123603023,1.10717597753397,1.42323626988794,1.94409613479242,0.836353184057875,1.52853794622324,1.48350781023303,1.73572257023205,2.3558034778562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| ||
|short_description=p4@Gabpa | |||
}} | }} |
Latest revision as of 19:03, 25 September 2015
Short description: | p4@Gabpa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gabpa_5end |
Coexpression cluster: | NA |
Association with transcript: | 201bp_to_ENSMUST00000009120, NM_008065, uc007ztk.1, uc007ztl.1_5end |
EntrezGene: | Gabpa |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gut epithelium | 1.19e-11 | 55 |
endo-epithelium | 3.19e-10 | 69 |
unilaminar epithelium | 2.86e-09 | 66 |
digestive system | 8.15e-09 | 116 |
digestive tract | 8.15e-09 | 116 |
primitive gut | 8.15e-09 | 116 |
endoderm-derived structure | 1.18e-08 | 118 |
endoderm | 1.18e-08 | 118 |
presumptive endoderm | 1.18e-08 | 118 |
subdivision of digestive tract | 2.20e-08 | 114 |
hemolymphoid system | 3.57e-07 | 48 |
immune system | 3.57e-07 | 48 |
gland of gut | 7.46e-07 | 24 |
pharynx | 9.52e-07 | 24 |
upper respiratory tract | 9.52e-07 | 24 |
chordate pharynx | 9.52e-07 | 24 |
pharyngeal arch system | 9.52e-07 | 24 |
pharyngeal region of foregut | 9.52e-07 | 24 |