Personal tools

FFCP PHASE1:Mm9::chr2:136539243..136539264,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20614
|EntrezGene=20614
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P60879
|UniProt=P60879
|association_with_transcript=29bp_to_ENSMUST00000110098_5end
|association_with_transcript=29bp_to_ENSMUST00000110098_5end
|cluster_id=chr2:136539243..136539264,+
|description=CAGE_peak_2_at_Snap25_5end
|description=CAGE_peak_2_at_Snap25_5end
|id=chr2:136539243..136539264,+
|id=chr2:136539243..136539264,+
|ontology_enrichment_celltype=CL:0000540!2.26e-13!33;CL:0000047!2.26e-13!33;CL:0000031!2.26e-13!33;CL:0000404!2.26e-13!33;CL:0000117!4.56e-12!23;CL:0000337!4.56e-12!23;CL:0000393!6.23e-09!39;CL:0000211!6.23e-09!39;CL:0000221!1.05e-08!44;CL:0000133!1.05e-08!44;CL:0002319!1.63e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000540,2.63e-14,33;CL:0000047,2.63e-14,33;CL:0000031,2.63e-14,33;CL:0000404,2.63e-14,33;CL:0000117,1.64e-13,23;CL:0000337,1.64e-13,23;CL:0000393,3.49e-10,39;CL:0000211,3.49e-10,39;CL:0000221,4.99e-10,44;CL:0000133,4.99e-10,44;CL:0002319,8.27e-10,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.94e-29!71;UBERON:0003075!2.94e-29!71;UBERON:0007284!2.94e-29!71;UBERON:0004121!6.30e-27!102;UBERON:0000924!6.30e-27!102;UBERON:0006601!6.30e-27!102;UBERON:0000073!1.16e-25!75;UBERON:0001016!1.16e-25!75;UBERON:0001017!1.60e-25!73;UBERON:0005743!1.60e-25!73;UBERON:0000033!4.28e-25!63;UBERON:0001049!8.26e-22!52;UBERON:0005068!8.26e-22!52;UBERON:0006241!8.26e-22!52;UBERON:0007135!8.26e-22!52;UBERON:0003056!4.65e-21!49;UBERON:0000955!7.60e-21!50;UBERON:0006238!7.60e-21!50;UBERON:0002616!4.27e-20!49;UBERON:0003080!4.63e-17!40;UBERON:0002020!1.53e-16!34;UBERON:0002780!2.36e-16!39;UBERON:0001890!2.36e-16!39;UBERON:0006240!2.36e-16!39;UBERON:0002791!9.34e-14!29;UBERON:0003528!9.34e-14!29;UBERON:0001893!9.34e-14!29;UBERON:0007811!1.67e-11!86;UBERON:0000956!1.81e-09!21;UBERON:0001869!1.81e-09!21;UBERON:0000203!1.81e-09!21;UBERON:0000153!1.14e-08!94;UBERON:0002021!5.03e-08!10;UBERON:0000411!5.03e-08!10;UBERON:0001950!5.03e-08!10;UBERON:0002619!1.12e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.20e-29,64;UBERON:0003075,1.20e-29,64;UBERON:0007284,1.20e-29,64;UBERON:0001016,8.25e-29,75;UBERON:0001017,1.20e-28,73;UBERON:0004121,1.06e-26,95;UBERON:0000924,1.06e-26,95;UBERON:0006601,1.06e-26,95;UBERON:0000073,4.69e-26,54;UBERON:0001049,1.30e-24,52;UBERON:0005068,1.30e-24,52;UBERON:0006241,1.30e-24,52;UBERON:0007135,1.30e-24,52;UBERON:0010371,1.44e-24,73;UBERON:0003056,1.03e-22,49;UBERON:0000955,2.95e-21,47;UBERON:0006238,2.95e-21,47;UBERON:0002616,2.00e-20,46;UBERON:0010314,4.86e-20,92;UBERON:0002020,5.58e-19,34;UBERON:0003080,7.52e-19,40;UBERON:0002780,4.74e-18,39;UBERON:0001890,4.74e-18,39;UBERON:0006240,4.74e-18,39;UBERON:0003528,8.47e-16,29;UBERON:0002791,8.47e-16,29;UBERON:0001893,8.47e-16,29;UBERON:0000956,6.67e-11,21;UBERON:0001869,6.67e-11,21;UBERON:0000203,6.67e-11,21;UBERON:0002021,6.48e-09,10;UBERON:0000411,6.48e-09,10;UBERON:0001950,6.48e-09,10;UBERON:0002619,7.40e-09,17
|phase1_expression=4.32401887182944,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,100.606212248716,0,0,0.159992422793407,0,0,0,0,0.380046838912748,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,12.9482534950143,12.1667925232568,12.6766280701236,0,0,0,0,0,0,0,10.6800300677732,8.10035629990144,12.4091727197315,56.5588949119531,54.9962666969518,8.81933754347669,8.62609239164127,7.35375029288017,262.075796778545,339.776006644685,347.611584758879,11.0784481693363,17.6571152152651,14.5855743755893,276.111986012366,155.322480368744,234.392512089627,79.5497180778903,77.7349377163102,41.9398753106926,1.4387976733305,3.77857800533928,0,0,0,1.07940638327563,0,0,27.5271063458234,0,0,0,5.49289337129054,0,0,0,0,0,0,15.8715592809493,0,12.6175818205101,5.20455980298408,10.9607572192371,4.38169444786511,8.28974523039424,10.347806227942,3.51866455723091,0,0.86759614151947,0,0,0,0,1.86391761218122,630.357055965861,473.559004105222,0.255457055208591,0,0,0,493.709947478296,465.278113066543,43.2250971268254,739.274833777752,645.170098844424,473.133377462118,350.441128226357,0.305518091550949,0,0,50.0851617009808,0.650602214813519,8.27647575960503,11.7040384373477,25.1677045785644,42.3187024721259,44.327347218558,46.1949502079463,172.037741541445,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0.233530684734339,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.134206418760372,433.61787393923,38.6921342546109,0,1.05780226665418,0.639864751605702,1.16118335930219,1.41754207454303,1.61346819698674,2.66853652613844,3.04361001780095,2.37264530772256,2.14108641141214,2.76468729680296,2.98434708061726,3.31438948102504,0.898819408654221,1.51296634912286,1.59313018603494,0.189667900953082,2.17072173958485,0,0.203651327845314,0,0.420814919341911,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.780534591431195,0,0.221464689648775,0.478364305972461,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,616.193164373146,531.086151949273,0,0.252470927204373,3.47059041357882,8.58965237452605,7.53981892064796,0.955875191810208,2.00518806674155,1.98153571552183,7.69140333182299,9.05993159525067,9.48690667071656,538.213205006527,0,0.178065603667255,0,0,0,0.728341908464944,0.604647113929502,1.32023555829129,0,2.45948118355142,4.13485269069154,0.727067458955011,1.42598951353889,1.58018378967908,2.10837217149998,1.03135543248187,82.0459449866629,1.8006109403131,0.776152102696527,1.50035924522115,7.09360934569094,4.99432689285798,12.9993726275676,7.91608867697958,0,0,8.38007912608855,0,0,0,0,0,2.91480836629851,541.071031266667,0,0,0,0,0,0,0,0,0,5.72802370809068,0.158167996790568,1.21991680276109,2.05210147561422,2.92723614420256,2.62035076495413,4.31565908431426,4.21532624199213,1.83229159388821,1.42576470620972,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.906921534460845,0,0.0897138566094757,0,5.40930863290133,0,0,0.643105137237198,0,306.660250541067,280.338069032871,283.010383639062,337.175943758315,471.336773602202,500.070760071982,420.539017644415,463.830839320947,559.630875095493,588.175714150067,3.84013186061454,3.19219898720825,4.60980735536162,4.61902762429759,9.22297915563122,8.08911437180062,10.0011027510727,8.03536723231687,9.62757628775446,6.82282471762253,10.8996098952803,8.48818536237343,7.77224512000024,9.28364709870604,9.01736862603128,9.0495801343784,9.15486174964358,6.17309505483856,8.24171801606613,5.2991611248383,11.3146853287187,7.63145966485151,8.58370283810355,9.01147783120437,7.34053167239579,7.95377314181759,4.93905526756486,8.15516105457313,8.01244271690584,7.2948495315506,7.94854621431967,6.99381824866501,4.50154147486658,7.90177890048427,5.20847849649082,8.74337022782811,7.25187986180766,7.30561583764214,4.20834330551455,3.75005412503176,6.4922993973718
|phase1_expression=4.32401887182944,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,100.606212248716,0,0,0.159992422793407,0,0,0,0,0.380046838912748,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,12.9482534950143,12.1667925232568,12.6766280701236,0,0,0,0,0,0,0,10.6800300677732,8.10035629990144,12.4091727197315,56.5588949119531,54.9962666969518,8.81933754347669,8.62609239164127,7.35375029288017,262.075796778545,339.776006644685,347.611584758879,11.0784481693363,17.6571152152651,14.5855743755893,276.111986012366,155.322480368744,234.392512089627,79.5497180778903,77.7349377163102,41.9398753106926,1.4387976733305,3.77857800533928,0,0,0,1.07940638327563,0,0,27.5271063458234,0,0,0,5.49289337129054,0,0,0,0,0,0,15.8715592809493,0,12.6175818205101,5.20455980298408,10.9607572192371,4.38169444786511,8.28974523039424,10.347806227942,3.51866455723091,0,0.86759614151947,0,0,0,0,1.86391761218122,630.357055965861,473.559004105222,0.255457055208591,0,0,0,493.709947478296,465.278113066543,43.2250971268254,739.274833777752,645.170098844424,473.133377462118,350.441128226357,0.305518091550949,0,0,50.0851617009808,0.650602214813519,8.27647575960503,11.7040384373477,25.1677045785644,42.3187024721259,44.327347218558,46.1949502079463,172.037741541445,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0.233530684734339,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.134206418760372,433.61787393923,38.6921342546109,0,1.05780226665418,0.639864751605702,1.16118335930219,1.41754207454303,1.61346819698674,2.66853652613844,3.04361001780095,2.37264530772256,2.14108641141214,2.76468729680296,2.98434708061726,3.31438948102504,0.898819408654221,1.51296634912286,1.59313018603494,0.189667900953082,2.17072173958485,0,0.203651327845314,0,0.420814919341911,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.780534591431195,0,0.221464689648775,0.478364305972461,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,616.193164373146,531.086151949273,0,0.252470927204373,3.47059041357882,8.58965237452605,7.53981892064796,0.955875191810208,2.00518806674155,1.98153571552183,7.69140333182299,9.05993159525067,9.48690667071656,538.213205006527,0,0.178065603667255,0,0,0,0.728341908464944,0.604647113929502,1.32023555829129,0,2.45948118355142,4.13485269069154,0.727067458955011,1.42598951353889,1.58018378967908,2.10837217149998,1.03135543248187,82.0459449866629,1.8006109403131,0.776152102696527,1.50035924522115,7.09360934569094,4.99432689285798,12.9993726275676,7.91608867697958,0,0,8.38007912608855,0,0,0,0,0,2.91480836629851,541.071031266667,0,0,0,0,0,0,0,0,0,5.72802370809068,0.158167996790568,1.21991680276109,2.05210147561422,2.92723614420256,2.62035076495413,4.31565908431426,4.21532624199213,1.83229159388821,1.42576470620972,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.906921534460845,0,0.0897138566094757,0,5.40930863290133,0,0,0.643105137237198,0,306.660250541067,280.338069032871,283.010383639062,337.175943758315,471.336773602202,500.070760071982,420.539017644415,463.830839320947,559.630875095493,588.175714150067,3.84013186061454,3.19219898720825,4.60980735536162,4.61902762429759,9.22297915563122,8.08911437180062,10.0011027510727,8.03536723231687,9.62757628775446,6.82282471762253,10.8996098952803,8.48818536237343,7.77224512000024,9.28364709870604,9.01736862603128,9.0495801343784,9.15486174964358,6.17309505483856,8.24171801606613,5.2991611248383,11.3146853287187,7.63145966485151,8.58370283810355,9.01147783120437,7.34053167239579,7.95377314181759,4.93905526756486,8.15516105457313,8.01244271690584,7.2948495315506,7.94854621431967,6.99381824866501,4.50154147486658,7.90177890048427,5.20847849649082,8.74337022782811,7.25187986180766,7.30561583764214,4.20834330551455,3.75005412503176,6.4922993973718
|short_description=p2@Snap25
|short_description=p2@Snap25
}}
}}

Latest revision as of 19:30, 25 September 2015

Short description:p2@Snap25
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Snap25_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 29bp_to_ENSMUST00000110098_5end
EntrezGene:Snap25
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Snap25

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3100.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C312.95
Mouse Granule cells, donor2.CNhs12357.11731-123E312.17
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.68
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.10
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.41
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F156.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D555.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3262.08
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3339.78
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7347.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.08
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F417.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4276.11
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5155.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6234.39
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D679.55
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F677.73
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E141.94
Mouse Schwann, donor1.CNhs12507.11728-123D91.44
Mouse Schwann, donor2.CNhs12573.11746-123F93.78
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A727.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.87
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D712.62
adrenal gland, embryo E14.CNhs11038.406-44C55.20
adrenal gland, embryo E16.CNhs11004.1254-43D610.96
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F58.29
adrenal gland, neonate N00.CNhs11191.1311-23C110.35
adrenal gland, neonate N25.CNhs11223.1377-27I33.52
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B2630.36
cerebellum, neonate N30.CNhs11135.1395-42I2473.56
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4493.71
corpus striatum, adult.CNhs10487.19-21D8465.28
corpus striatum, neonate N00.CNhs11226.630-43F143.23
cortex, adult.CNhs10473.12-14D5739.27
cortex, neonate N30.CNhs11107.1392-42F2645.17
diencephalon, adult.CNhs10482.20-12F2473.13
diencephalon, neonate N30.CNhs11201.1388-42B2350.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G450.09
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E28.28
eyeball, embryo E15.CNhs10593.426-16C911.70
eyeball, embryo E17.CNhs11023.1261-18D425.17
eyeball, neonate N00.CNhs11207.633-15C642.32
eyeball, neonate N01.CNhs11140.1532-43E744.33
eyeball, neonate N02.CNhs11205.1551-44G846.19
eyeball, neonate N16.CNhs11188.777-19A2172.04
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E8433.62
hippocampus, neonate N00.CNhs11228.627-43G138.69
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F82.17
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2616.19
medulla oblongata, neonate N30.CNhs11200.1396-42A3531.09
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.59
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.06
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.49
olfactory brain, adult.CNhs10489.18-22I9538.21
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G882.05
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B97.09
pituitary gland, embryo E16.CNhs11036.449-43F64.99
pituitary gland, embryo E17.CNhs11039.1265-44F513.00
pituitary gland, neonate N00.CNhs11190.1308-22E97.92
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F88.38
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C9541.07
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B84.32
stomach, neonate N07.CNhs11210.718-18A94.22
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E45.41
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1306.66
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2280.34
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3283.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7337.18
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4471.34
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5500.07
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6420.54
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7463.83
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8559.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9588.18
whole body, embryo E11.CNhs11014.324-5I83.84
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H24.61
whole body, embryo E14.5.CNhs10578.420-27D24.62
whole body, embryo E14.CNhs10519.395-14B19.22
whole body, embryo E16.CNhs10514.453-14F28.09
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.04
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.90
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.77
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.02
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.15
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.31
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.01
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.34
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.01
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.90
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I58.74
whole body, embryo E18.CNhs10516.493-3B37.25
whole body, neonate N00.CNhs10525.657-19C27.31
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B46.49





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.63e-1433
neuronal stem cell2.63e-1433
neuroblast2.63e-1433
electrically signaling cell2.63e-1433
CNS neuron (sensu Vertebrata)1.64e-1323
neuroblast (sensu Vertebrata)1.64e-1323
electrically responsive cell3.49e-1039
electrically active cell3.49e-1039
ectodermal cell4.99e-1044
neurectodermal cell4.99e-1044
neural cell8.27e-1043

Uber anatomy
Ontology termp-valuen
neurectoderm1.20e-2964
neural plate1.20e-2964
presumptive neural plate1.20e-2964
nervous system8.25e-2975
central nervous system1.20e-2873
ectoderm-derived structure1.06e-2695
ectoderm1.06e-2695
presumptive ectoderm1.06e-2695
regional part of nervous system4.69e-2654
neural tube1.30e-2452
neural rod1.30e-2452
future spinal cord1.30e-2452
neural keel1.30e-2452
ecto-epithelium1.44e-2473
pre-chordal neural plate1.03e-2249
brain2.95e-2147
future brain2.95e-2147
regional part of brain2.00e-2046
structure with developmental contribution from neural crest4.86e-2092
gray matter5.58e-1934
anterior neural tube7.52e-1940
regional part of forebrain4.74e-1839
forebrain4.74e-1839
future forebrain4.74e-1839
brain grey matter8.47e-1629
regional part of telencephalon8.47e-1629
telencephalon8.47e-1629
cerebral cortex6.67e-1121
cerebral hemisphere6.67e-1121
pallium6.67e-1121
occipital lobe6.48e-0910
visual cortex6.48e-0910
neocortex6.48e-0910
regional part of cerebral cortex7.40e-0917
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:136539243..136539264,%2B&oldid=4209723"