FFCP PHASE1:Mm9::chr11:82721862..82721902,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:82721862..82721902,-
|short_description=p1@Nle1
|description=CAGE_peak_1_at_Nle1_5end
|association_with_transcript=0bp_to_NM_145431,uc007knt.2_5end
|Entr...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=217011 | |EntrezGene=217011 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=155 | |||
|TSSclassifier=NA | |||
|UniProt=Q3URT5,Q8VEJ4 | |UniProt=Q3URT5,Q8VEJ4 | ||
|association_with_transcript=0bp_to_NM_145431,uc007knt.2_5end | |||
|cluster_id=chr11:82721862..82721902,- | |||
|description=CAGE_peak_1_at_Nle1_5end | |||
|id=chr11:82721862..82721902,- | |||
|ontology_enrichment_celltype=CL:0000988!2.54e-12!32;CL:0002032!2.54e-12!32;CL:0000037!2.54e-12!32;CL:0000566!2.54e-12!32;CL:0000837!2.54e-12!32;CL:0002320!1.86e-09!46;CL:0000134!1.86e-09!46;CL:0002031!8.57e-09!25;CL:0000084!6.70e-08!11;CL:0000827!6.70e-08!11;CL:0000838!9.47e-08!12;CL:0000542!1.01e-07!13;CL:0000051!1.01e-07!13;CL:0000219!1.18e-07!54;CL:0000063!2.62e-07!66;CL:0000034!2.91e-07!97;CL:0000791!6.03e-07!9;CL:0000789!6.03e-07!9;CL:0002420!6.03e-07!9;CL:0002419!6.03e-07!9;CL:0000790!6.03e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.54e-12,32;CL:0002032,2.54e-12,32;CL:0000037,2.54e-12,32;CL:0000837,2.54e-12,32;CL:0002320,1.85e-09,46;CL:0000134,1.85e-09,46;CL:0002031,8.56e-09,25;CL:0000084,6.70e-08,11;CL:0000827,6.70e-08,11;CL:0000838,9.47e-08,12;CL:0000542,1.01e-07,13;CL:0000051,1.01e-07,13;CL:0000219,1.18e-07,54;CL:0000034,2.96e-07,97;CL:0000791,6.03e-07,9;CL:0000789,6.03e-07,9;CL:0002420,6.03e-07,9;CL:0002419,6.03e-07,9;CL:0000790,6.03e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.86e-09!46;UBERON:0002193!6.28e-09!48;UBERON:0002390!1.00e-08!45;UBERON:0003061!1.00e-08!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.85e-09,46;UBERON:0002193,6.28e-09,48;UBERON:0002405,6.28e-09,48;UBERON:0002390,1.00e-08,45;UBERON:0003061,1.00e-08,45 | |||
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| 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| ||
|short_description=p1@Nle1 | |||
}} | }} |
Latest revision as of 19:36, 25 September 2015
Short description: | p1@Nle1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nle1_5end |
Coexpression cluster: | MCL_coexpression_mm9:155 |
Association with transcript: | 0bp_to_NM_145431, uc007knt.2_5end |
EntrezGene: | Nle1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.54e-12 | 32 |
hematopoietic oligopotent progenitor cell | 2.54e-12 | 32 |
hematopoietic stem cell | 2.54e-12 | 32 |
hematopoietic multipotent progenitor cell | 2.54e-12 | 32 |
connective tissue cell | 1.85e-09 | 46 |
mesenchymal cell | 1.85e-09 | 46 |
hematopoietic lineage restricted progenitor cell | 8.56e-09 | 25 |
T cell | 6.70e-08 | 11 |
pro-T cell | 6.70e-08 | 11 |
lymphoid lineage restricted progenitor cell | 9.47e-08 | 12 |
lymphocyte | 1.01e-07 | 13 |
common lymphoid progenitor | 1.01e-07 | 13 |
motile cell | 1.18e-07 | 54 |
stem cell | 2.96e-07 | 97 |
mature alpha-beta T cell | 6.03e-07 | 9 |
alpha-beta T cell | 6.03e-07 | 9 |
immature T cell | 6.03e-07 | 9 |
mature T cell | 6.03e-07 | 9 |
immature alpha-beta T cell | 6.03e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.85e-09 | 46 |
hemolymphoid system | 6.28e-09 | 48 |
immune system | 6.28e-09 | 48 |
hematopoietic system | 1.00e-08 | 45 |
blood island | 1.00e-08 | 45 |