FFCP PHASE1:Mm9::chr2:144993640..144993718,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:144993640..144993718,+
|short_description=p2@Slc24a3
|description=CAGE_peak_2_at_Slc24a3_5end
|association_with_transcript=0bp_to_ENSMUST00000153249_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=94249 | |EntrezGene=94249 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000153249_5end | |||
|cluster_id=chr2:144993640..144993718,+ | |||
|description=CAGE_peak_2_at_Slc24a3_5end | |||
|id=chr2:144993640..144993718,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.39e-07!23;CL:0000337!6.39e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.45e-07,23;CL:0000337,4.45e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p2@Slc24a3 | |||
}} | }} |
Latest revision as of 20:31, 25 September 2015
Short description: | p2@Slc24a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc24a3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000153249_5end |
EntrezGene: | Slc24a3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.45e-07 | 23 |
neuroblast (sensu Vertebrata) | 4.45e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.41e-17 | 54 |
neural tube | 6.20e-16 | 52 |
neural rod | 6.20e-16 | 52 |
future spinal cord | 6.20e-16 | 52 |
neural keel | 6.20e-16 | 52 |
ecto-epithelium | 1.82e-14 | 73 |
central nervous system | 2.02e-14 | 73 |
neurectoderm | 2.46e-14 | 64 |
neural plate | 2.46e-14 | 64 |
presumptive neural plate | 2.46e-14 | 64 |
nervous system | 1.88e-13 | 75 |
brain | 1.51e-12 | 47 |
future brain | 1.51e-12 | 47 |
ectoderm-derived structure | 3.80e-12 | 95 |
ectoderm | 3.80e-12 | 95 |
presumptive ectoderm | 3.80e-12 | 95 |
regional part of brain | 5.75e-12 | 46 |
gray matter | 4.51e-11 | 34 |
anterior neural tube | 6.08e-10 | 40 |
pre-chordal neural plate | 1.70e-09 | 49 |
regional part of forebrain | 2.53e-09 | 39 |
forebrain | 2.53e-09 | 39 |
future forebrain | 2.53e-09 | 39 |
occipital lobe | 4.27e-08 | 10 |
visual cortex | 4.27e-08 | 10 |
neocortex | 4.27e-08 | 10 |
brain grey matter | 7.96e-08 | 29 |
regional part of telencephalon | 7.96e-08 | 29 |
telencephalon | 7.96e-08 | 29 |
posterior neural tube | 2.02e-07 | 12 |
chordal neural plate | 2.02e-07 | 12 |
structure with developmental contribution from neural crest | 7.12e-07 | 92 |