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FFCP PHASE1:Mm9::chr3:89263247..89263282,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=68603
|EntrezGene=68603
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=D3YXP6
|UniProt=D3YXP6
|association_with_transcript=0bp_to_ENSMUST00000107410_5end
|association_with_transcript=0bp_to_ENSMUST00000107410_5end
|cluster_id=chr3:89263247..89263282,+
|description=CAGE_peak_2_at_Pmvk_5end
|description=CAGE_peak_2_at_Pmvk_5end
|id=chr3:89263247..89263282,+
|id=chr3:89263247..89263282,+
|ontology_enrichment_celltype=CL:0000221!4.03e-16!44;CL:0000133!4.03e-16!44;CL:0002319!1.46e-15!43;CL:0000055!2.99e-13!50;CL:0000117!4.98e-12!23;CL:0000337!4.98e-12!23;CL:0000540!9.59e-12!33;CL:0000047!9.59e-12!33;CL:0000031!9.59e-12!33;CL:0000404!9.59e-12!33;CL:0002321!3.08e-09!70;CL:0000220!3.08e-09!70;CL:0000393!3.78e-09!39;CL:0000211!3.78e-09!39
|ontology_enrichment_celltype=CL:0000221!4.03e-16!44;CL:0000133!4.03e-16!44;CL:0002319!1.46e-15!43;CL:0000055!2.99e-13!50;CL:0000117!4.98e-12!23;CL:0000337!4.98e-12!23;CL:0000540!9.59e-12!33;CL:0000047!9.59e-12!33;CL:0000031!9.59e-12!33;CL:0000404!9.59e-12!33;CL:0002321!3.08e-09!70;CL:0000220!3.08e-09!70;CL:0000393!3.78e-09!39;CL:0000211!3.78e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000221,4.03e-16,44;CL:0000133,4.03e-16,44;CL:0002319,1.46e-15,43;CL:0000117,4.98e-12,23;CL:0000337,4.98e-12,23;CL:0000540,9.59e-12,33;CL:0000047,9.59e-12,33;CL:0000031,9.59e-12,33;CL:0000404,9.59e-12,33;CL:0002321,3.10e-09,70;CL:0000393,3.78e-09,39;CL:0000211,3.78e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.99e-22!73;UBERON:0005743!4.99e-22!73;UBERON:0000073!1.01e-21!75;UBERON:0001016!1.01e-21!75;UBERON:0004121!2.16e-16!102;UBERON:0000924!2.16e-16!102;UBERON:0006601!2.16e-16!102;UBERON:0001049!7.30e-16!52;UBERON:0005068!7.30e-16!52;UBERON:0006241!7.30e-16!52;UBERON:0007135!7.30e-16!52;UBERON:0002346!9.92e-15!71;UBERON:0003075!9.92e-15!71;UBERON:0007284!9.92e-15!71;UBERON:0000033!4.38e-14!63;UBERON:0002616!9.41e-14!49;UBERON:0000955!1.51e-13!50;UBERON:0006238!1.51e-13!50;UBERON:0000025!7.52e-13!114;UBERON:0003056!9.64e-12!49;UBERON:0004111!5.08e-11!122;UBERON:0003080!9.37e-11!40;UBERON:0002780!2.54e-10!39;UBERON:0001890!2.54e-10!39;UBERON:0006240!2.54e-10!39;UBERON:0002020!1.33e-09!34;UBERON:0007811!4.52e-09!86;UBERON:0000153!2.84e-08!94;UBERON:0002791!9.06e-07!29;UBERON:0003528!9.06e-07!29;UBERON:0001893!9.06e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.98e-22,73;UBERON:0001016,1.01e-21,75;UBERON:0004121,2.74e-18,95;UBERON:0000924,2.74e-18,95;UBERON:0006601,2.74e-18,95;UBERON:0010314,2.85e-17,92;UBERON:0002346,3.62e-17,64;UBERON:0003075,3.62e-17,64;UBERON:0007284,3.62e-17,64;UBERON:0000073,5.42e-17,54;UBERON:0001049,7.30e-16,52;UBERON:0005068,7.30e-16,52;UBERON:0006241,7.30e-16,52;UBERON:0007135,7.30e-16,52;UBERON:0010371,3.25e-15,73;UBERON:0000025,7.52e-13,114;UBERON:0002616,2.97e-12,46;UBERON:0000955,4.63e-12,47;UBERON:0006238,4.63e-12,47;UBERON:0003056,9.63e-12,49;UBERON:0004111,5.08e-11,122;UBERON:0003080,9.37e-11,40;UBERON:0002780,2.54e-10,39;UBERON:0001890,2.54e-10,39;UBERON:0006240,2.54e-10,39;UBERON:0002020,1.33e-09,34;UBERON:0000119,7.54e-07,176;UBERON:0003528,9.05e-07,29;UBERON:0002791,9.05e-07,29;UBERON:0001893,9.05e-07,29
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92179471,8.7484326065659,10.4544148007234,9.60795280483181,8.4964538222437,6.77758336947755,10.4702376793612,5.05498395837992,3.72803587852155,9.58277995763124,8.07389348637486,12.2439282938252,10.6948153589226,14.0784207590727,9.12363077650202,7.27614879603675,6.77062801188541,4.8235298435827,5.07326653734613,6.04863013141517,6.95224465381992,10.1362607645082,9.86025188782342,10.3936658382236,8.41425469637163,7.74857283646933,8.41368146639782,11.519783119617,8.78408114548884,9.06860999194498,6.55370203389463,5.36018344068638,8.08179469778768,8.76576766361767,2.94749498699775,4.43971906748129,3.13998498133165,5.20442310728643,4.82973985080476,4.87974436173073,3.29672923681077,3.42989406526505,5.01572104035363,18.6368108063632,13.8097570952153,12.6037012956667,13.4045482228076,8.90607275701835,15.8632718451837,12.8254275044043,8.55610286126019,10.8754178156209,6.73088405277366,15.9832515279632,10.3746467084268,12.8050204315601,7.29320151204882,13.6248555708189,12.869045591501,14.0015438515018,11.743998262617,10.2694147069381,11.8767689528985,10.6461305953901,12.449338531481,11.8924714486751,9.34767225111091,10.0512070672323,8.57328644309533,9.85016770531272,10.6100071255038,10.3021475200827,13.1007038919614,14.7433778525729,11.1809757880383,12.8755542571553,11.482366913954,11.0107975085937,12.1845035364014,11.8903182367302,15.2580432633949,11.81495790459,8.41713407486608,13.1684870117833,8.37288100192289,9.82154503607254,9.45114731234393,9.83823716003821,9.49280196164194,7.71974307869848,6.87587372954555,7.26895661861605,9.04424818390014,9.04284558919644
|phase1_expression=20.178754735204,1.39590163055744,0.909998478779072,1.81478526784098,1.00179145989269,1.84667199103079,3.27057696833736,1.54947988129892,0.140788722151667,0.468129052643987,3.4243593645101,3.43020283679947,2.56801094896809,1.83582845079895,2.99798785634096,5.66930748691513,9.79386629379405,1.73504190947031,0.959801035240171,1.27316895539409,6.12311689087702,8.14185799847259,12.27639008953,3.67982572424835,3.21172993494038,2.29692785646008,3.01533397311352,2.37018355954478,3.80046838912748,1.51218077855958,5.98672378769323,12.7006134691926,11.0711661765223,15.8481681015439,2.3108129580102,2.82598897109437,2.6542016314108,11.3003540298965,8.5946887897618,13.6116173433188,12.9410927366823,15.0270006690858,12.62326917881,6.42073771675444,3.54819259268301,4.77221555620372,13.3006528539167,32.9217986134474,29.4379484864192,17.3042610176112,24.7775966276892,31.6255641602937,0.838913030288682,3.62681071005672,2.35265659399725,11.8339340576536,7.73640287834643,10.3134418455488,27.1104057551861,24.3335850465135,22.1840991227163,17.6199156675949,11.5608323494448,9.44894703145469,7.9109309005358,8.5257613793532,14.3808053048834,20.7477884873639,10.5763404554647,12.4205463265155,10.3059231062177,37.4202789568983,34.4554923884517,13.4739879136449,14.7602025368084,12.8690630125403,25.3266526298594,16.2162919368188,17.050325191443,25.190280956467,25.9824907830843,29.1711487511786,29.0350318961436,23.6360296213306,20.7805616976462,27.6950870345248,32.8878582645928,30.7559085611746,6.81535739998656,12.8471652181535,6.37701875143691,16.3480536626463,24.478968013479,14.5719861742211,18.8435161059824,13.4408066129201,6.46044332606059,11.2484012901518,20.2633083590238,12.0135455333516,19.5772353489586,26.9485602570067,33.1246811618639,28.4426681261332,11.6905162146056,10.1343946190039,9.0994400102661,7.87868770061514,1.55362730188303,6.08612770165782,11.7970022200972,7.30717147949139,5.99600292865752,9.04335843315735,4.70354828542819,9.80199412371469,3.46072954828123,7.80836527367523,2.65383165584962,7.60304194752823,4.19598885074748,4.84875253135222,1.86391761218122,7.61230072230023,11.51956887474,2.04365644166873,6.11057134980193,4.19931911695385,4.57452817463033,16.027598416316,10.5225138648284,9.80103946480342,11.6462294528825,11.7629110371952,17.6619837875626,16.061885043708,7.73979165262404,7.71323217782577,9.85618757891331,5.89237196482127,13.1421647392331,13.3343220571414,10.803727788321,13.4127287873786,11.9063873514824,15.2455327138971,14.1489604085191,9.31332134660456,12.287375597172,9.07709184805532,9.67731182901719,13.3709396780821,8.61946472599353,6.61679116392116,7.61393904709391,11.1459189418356,4.21327912387941,4.11756651383544,2.84163499395593,13.6703009873431,15.4787199587523,18.1862682075625,12.5474709860161,14.7573173810553,13.2669717083145,18.1376476905318,13.1453966685813,13.8950757416932,14.3167069424728,11.1633875573785,7.21512404958116,9.0643992203706,7.02560368931362,5.63666958793561,11.1453672738987,8.95270127699774,0.991256348951394,4.7601101999438,9.81125952462076,11.6118335930219,7.7320476793256,6.85723983719365,6.22658522765637,7.98947629672748,1.42358718463353,3.78807595865225,4.27269854960458,3.38226002469956,5.06906626509712,2.69645822596266,2.16138049874694,3.18626037206988,7.58671603812327,11.1963542357534,10.1436962105772,14.255592949172,9.50367187121366,10.5905088034381,9.16929788301731,9.00421902675573,10.5189147653721,9.13139013021324,8.89357881261447,8.3422552858047,7.27268281918851,8.99448449539415,8.92584534109413,7.95884627182976,8.65727896056827,11.2201493605816,5.83686816390127,9.33508804839477,5.75072826109418,7.07067800570156,9.04909252032226,19.1959947239805,28.3447913364621,13.0259750768109,6.28160846566456,11.9379589415405,10.1038285394056,12.5611363473639,10.3263709246941,8.20780661464897,8.33152743101048,11.1226179278945,10.8768249433272,7.9727288273559,7.33491935824441,8.84861899464985,9.32498902075836,5.93061140184197,7.53956419696361,11.9659250440116,6.39293554924747,5.24279817978992,18.7844190285717,18.1678114217915,4.75411341592359,5.04941854408746,12.304820557234,11.3227235846025,10.3403230911743,11.9484398976276,9.58034298554295,9.6246020468203,10.9298889452221,10.2289550268959,10.6727700045561,9.3183181762324,3.97432238583152,11.0400674273698,8.30723492703238,4.12425307431339,1.32745138339963,13.352934988524,8.46505959501303,13.9567759019365,11.5167738223501,9.83792473420568,7.75284879504663,7.27067458955011,6.06045543254026,4.10847785316561,1.05418608574999,0,14.9793426531667,14.2248264284735,17.0753462593236,13.2888961719587,13.1231772895282,15.161349496176,15.9612549984057,13.0919928119278,4.22409074514679,5.08396970073168,3.96951116498931,5.93590510589328,4.35953952078945,8.44380948994182,8.95292580023523,10.1767357841938,4.95517422270746,15.9465759729038,2.39219233116994,11.7640514739037,8.70414278637645,6.78126445216888,7.65487675237741,6.17701067657611,3.39956859987711,5.87796099759364,3.31679937130617,3.81868247206045,8.54107182669065,7.9294592179471,8.7484326065659,10.4544148007234,9.60795280483181,8.4964538222437,6.77758336947755,10.4702376793612,5.05498395837992,3.72803587852155,9.58277995763124,8.07389348637486,12.2439282938252,10.6948153589226,14.0784207590727,9.12363077650202,7.27614879603675,6.77062801188541,4.8235298435827,5.07326653734613,6.04863013141517,6.95224465381992,10.1362607645082,9.86025188782342,10.3936658382236,8.41425469637163,7.74857283646933,8.41368146639782,11.519783119617,8.78408114548884,9.06860999194498,6.55370203389463,5.36018344068638,8.08179469778768,8.76576766361767,2.94749498699775,4.43971906748129,3.13998498133165,5.20442310728643,4.82973985080476,4.87974436173073,3.29672923681077,3.42989406526505,5.01572104035363,18.6368108063632,13.8097570952153,12.6037012956667,13.4045482228076,8.90607275701835,15.8632718451837,12.8254275044043,8.55610286126019,10.8754178156209,6.73088405277366,15.9832515279632,10.3746467084268,12.8050204315601,7.29320151204882,13.6248555708189,12.869045591501,14.0015438515018,11.743998262617,10.2694147069381,11.8767689528985,10.6461305953901,12.449338531481,11.8924714486751,9.34767225111091,10.0512070672323,8.57328644309533,9.85016770531272,10.6100071255038,10.3021475200827,13.1007038919614,14.7433778525729,11.1809757880383,12.8755542571553,11.482366913954,11.0107975085937,12.1845035364014,11.8903182367302,15.2580432633949,11.81495790459,8.41713407486608,13.1684870117833,8.37288100192289,9.82154503607254,9.45114731234393,9.83823716003821,9.49280196164194,7.71974307869848,6.87587372954555,7.26895661861605,9.04424818390014,9.04284558919644
|short_description=p2@Pmvk
|short_description=p2@Pmvk
}}
}}

Latest revision as of 20:45, 25 September 2015

Short description:p2@Pmvk
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Pmvk_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000107410_5end
EntrezGene:Pmvk
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Pmvk

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.18
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.42
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.43
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.84
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.67
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.12
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I912.28
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B93.80
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.70
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G811.30
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H313.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H215.03
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H412.62
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.42
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.55
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.77
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B713.30
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C232.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B829.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C317.30
Mouse Astrocytes, donor2.CNhs12078.11552-120C424.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C431.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.74
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C327.11
Mouse Granule cells, donor2.CNhs12357.11731-123E324.33
Mouse Granule cells, donor3.CNhs12108.11636-122C722.18
Mouse Meningeal cells, donor1.CNhs12132.11716-123C617.62
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C814.38
Mouse Microglia, donor2.CNhs12634.11736-123E820.75
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.58
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.42
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F137.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D534.46
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D213.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.76
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D612.87
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D325.33
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.22
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D425.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.98
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D829.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E429.04
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.78
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D627.70
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F632.89
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E130.76
Mouse Schwann, donor1.CNhs12507.11728-123D96.82
Mouse Schwann, donor2.CNhs12573.11746-123F912.85
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.38
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F716.35
Mouse hepatocyte, donor1.CNhs13078.11714-123C424.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C814.57
Mouse hepatocyte, donor6.CNhs13090.11822-124F418.84
Mouse hepatocyte, donor8.CNhs13091.11824-124F613.44
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E320.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H126.95
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I833.12
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G111.69
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.13
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.10
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.88
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D76.09
adrenal gland, embryo E14.CNhs11038.406-44C511.80
adrenal gland, embryo E16.CNhs11004.1254-43D67.31
adrenal gland, embryo E17.CNhs11043.1263-45I16.00
adrenal gland, embryo E18.CNhs11026.1262-18F59.04
adrenal gland, neonate N00.CNhs11191.1311-23C14.70
adrenal gland, neonate N25.CNhs11223.1377-27I39.80
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H17.81
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F57.60
bone (os femoris), neonate N16.CNhs11225.1525-43A64.20
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I211.52
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.11
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.57
corpora quadrigemina, adult.CNhs10501.16-22A416.03
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F19.80
cortex, adult.CNhs10473.12-14D511.65
cortex, neonate N30.CNhs11107.1392-42F211.76
diencephalon, adult.CNhs10482.20-12F217.66
diencephalon, neonate N30.CNhs11201.1388-42B216.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.74
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.71
epididymis, adult.CNhs10490.58-23B29.86
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C613.14
eyeball, embryo E14.CNhs10521.399-16E213.33
eyeball, embryo E15.CNhs10593.426-16C910.80
eyeball, embryo E17.CNhs11023.1261-18D413.41
eyeball, neonate N00.CNhs11207.633-15C611.91
eyeball, neonate N01.CNhs11140.1532-43E715.25
eyeball, neonate N02.CNhs11205.1551-44G814.15
eyeball, neonate N16.CNhs11188.777-19A29.31
forelimb, embryo E11.CNhs10596.335-25E212.29
forelimb, embryo E12.CNhs10600.359-14H29.08
forelimb, embryo E13.CNhs10589.384-1E29.68
forelimb, embryo E14.CNhs10577.413-26A813.37
forelimb, embryo E15.CNhs11007.437-20E78.62
forelimb, embryo E17.CNhs10598.1517-43C46.62
forelimb, embryo E18.CNhs11008.1520-43B57.61
gonad, embryo E13.CNhs11044.1564-45I611.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E913.67
heart, embryo E12.CNhs11015.353-12F515.48
heart, embryo E13.CNhs11013.376-3I918.19
heart, embryo E14.CNhs10597.403-26D412.55
heart, embryo E15.CNhs11017.431-16C814.76
heart, embryo E16.CNhs11021.457-17C613.27
heart, embryo E17.CNhs11025.479-18E518.14
heart, embryo E18.CNhs11030.1283-20G313.15
heart, neonate N00.CNhs11213.639-21E313.90
heart, neonate N03.CNhs11221.1349-25I214.32
heart, neonate N10.CNhs11118.749-24G111.16
heart, neonate N16.CNhs11209.782-15G17.22
heart, neonate N20.CNhs11127.821-26I69.06
heart, neonate N25.CNhs11196.1351-25D37.03
heart, neonate N30.CNhs11202.1390-42D25.64
hippocampus, adult.CNhs10478.13-16E811.15
hippocampus, neonate N00.CNhs11228.627-43G18.95
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A34.76
intestine, embryo E12.CNhs11019.1251-16I59.81
intestine, embryo E13.CNhs11010.381-16D511.61
intestine, embryo E15.CNhs10602.976-16D87.73
intestine, embryo E16.CNhs10585.463-22H46.86
intestine, embryo E17.CNhs10582.482-18D36.23
intestine, embryo E18.CNhs10526.1289-20F77.99
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E93.79
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F23.38
intestine, neonate N10.CNhs11098.755-23A55.07
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I97.59
kidney, embryo E15.CNhs10997.434-16F811.20
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I214.26
kidney, embryo E18.CNhs11001.1288-20C79.50
kidney, neonate N00.CNhs11214.646-21G710.59
kidney, neonate N10.CNhs11206.758-6D59.17
kidney, neonate N20.CNhs11113.832-19I19.00
kidney, neonate N25.CNhs11122.1353-25F310.52
kidney, neonate N30.CNhs11203.1385-42H19.13
liver, adult pregnant day01.CNhs10466.508-5B28.89
liver, embryo E12.CNhs10601.355-15F88.34
liver, embryo E13.CNhs10524.378-3H67.27
liver, embryo E14.CNhs10594.409-16E18.99
liver, embryo E15.CNhs10520.433-16D78.93
liver, embryo E16.CNhs10523.462-17F57.96
liver, embryo E17.CNhs10510.481-18A38.66
liver, embryo E18.CNhs10579.499-43G411.22
liver, neonate N00.CNhs11117.641-24F45.84
liver, neonate N03.CNhs11123.1345-25G29.34
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H27.07
liver, neonate N10.CNhs11115.751-24B99.05
liver, neonate N20.CNhs11220.823-25A319.20
liver, neonate N25.CNhs11198.1368-26H128.34
liver, neonate N30.CNhs11106.1382-42D113.03
lung, adult.CNhs10474.28-22B16.28
lung, embryo E12.CNhs10522.354-16G211.94
lung, embryo E14.CNhs10604.404-26F810.10
lung, embryo E15.CNhs11020.432-17C512.56
lung, embryo E16.CNhs10998.458-17B610.33
lung, embryo E17.CNhs10605.480-44A68.21
lung, embryo E18.CNhs10583.1287-20I68.33
lung, neonate N00.CNhs11224.640-42C611.12
lung, neonate N06.CNhs11212.683-20E510.88
lung, neonate N07.CNhs11111.715-19A37.97
lung, neonate N10.CNhs11219.750-23E67.33
lung, neonate N20.CNhs11109.822-18A48.85
lung, neonate N25.CNhs11119.1359-25C79.32
lung, neonate N30.CNhs11133.1394-42H25.93
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A111.97
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H25.24
medulla oblongata, adult.CNhs10477.17-12C218.78
medulla oblongata, neonate N30.CNhs11200.1396-42A318.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.75
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.05
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.30
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.32
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.34
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.95
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.58
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.62
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.93
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.23
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D610.67
olfactory brain, adult.CNhs10489.18-22I99.32
ovary, adult.CNhs10507.91-2I73.97
ovary, embryo E18.CNhs11040.505-44H711.04
ovary, neonate N00.CNhs11217.1299-22I48.31
oviduct, adult pregnant day01.CNhs10500.988-6G64.12
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F413.35
pancreas, embryo E15.CNhs11042.1556-45F28.47
pancreas, embryo E16.CNhs11003.460-26E513.96
pancreas, embryo E17.CNhs10599.1558-45G311.52
pancreas, embryo E18.CNhs10580.1535-43I79.84
pancreas, neonate N00.CNhs11105.645-26G97.75
pancreas, neonate N01.CNhs11138.1531-43D77.27
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G814.98
pituitary gland, embryo E12.CNhs11018.346-16E614.22
pituitary gland, embryo E13.CNhs11009.370-44C717.08
pituitary gland, embryo E14.CNhs11037.398-44A513.29
pituitary gland, embryo E15.CNhs10592.427-16B913.12
pituitary gland, embryo E16.CNhs11036.449-43F615.16
pituitary gland, embryo E17.CNhs11039.1265-44F515.96
pituitary gland, neonate N00.CNhs11190.1308-22E913.09
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G35.08
prostate, adult.CNhs10470.859-1F83.97
skin, adult.CNhs10492.30-1C35.94
skin, neonate N00.CNhs11124.650-25G44.36
skin, neonate N03.CNhs11215.662-22H38.44
skin, neonate N06.CNhs11097.693-20I58.95
skin, neonate N10.CNhs11108.762-6C410.18
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C915.95
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C111.76
spleen, embryo E18.CNhs11011.1271-21F28.70
spleen, neonate N10.CNhs11116.752-24D16.78
spleen, neonate N20.CNhs11112.824-19H17.65
spleen, neonate N25.CNhs11099.1354-25G36.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.88
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.32
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E38.54
stomach, embryo E15.CNhs10603.1252-16G87.93
stomach, embryo E16.CNhs11022.459-17D48.75
stomach, embryo E17.CNhs11006.1035-18D510.45
stomach, embryo E18.CNhs10999.1286-20C69.61
stomach, neonate N03.CNhs11193.1340-24B88.50
stomach, neonate N07.CNhs11210.718-18A96.78
stomach, neonate N25.CNhs11104.1355-25E410.47
stomach, neonate N30.CNhs11134.1386-42I15.05
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G59.58
testis, embryo E13.CNhs11031.389-23F58.07
testis, embryo E15.CNhs11034.443-27C512.24
testis, embryo E16.CNhs11033.470-26G510.69
testis, embryo E17.CNhs11029.486-18I514.08
testis, embryo E18.CNhs11027.503-18G59.12
testis, neonate N00.CNhs11189.1300-22B77.28
testis, neonate N07.CNhs11222.726-26I46.77
testis, neonate N10.CNhs11204.763-44D94.82
testis, neonate N20.CNhs11110.839-18H35.07
testis, neonate N30.CNhs11130.1391-42E26.05
thymus, adult.CNhs10471.38-12B56.95
thymus, embryo E14.CNhs11041.402-44I410.14
thymus, embryo E15.CNhs11005.430-45I29.86
thymus, embryo E16.CNhs11002.456-26C510.39
thymus, embryo E17.CNhs10581.478-18C18.41
thymus, embryo E18.CNhs10595.1273-19G47.75
thymus, neonate N02.CNhs11181.1541-43F88.41
thymus, neonate N03.CNhs11137.2104-43C711.52
thymus, neonate N06.CNhs11197.681-26C48.78
thymus, neonate N07.CNhs11211.713-19D39.07
thymus, neonate N10.CNhs11194.748-24E46.55
thymus, neonate N20.CNhs11186.820-7A25.36
thymus, neonate N25.CNhs11125.1362-25G78.08
thymus, neonate N30.CNhs11132.1393-42G28.77
tongue, adult.CNhs10499.32-1B42.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.14
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.20
urinary bladder, adult.CNhs10481.879-12E44.83
uterus, adult pregnant day19.CNhs10497.590-15F54.88
uterus, adult.CNhs10509.92-27E53.30
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.64
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.40
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I815.98
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H212.81
whole body, embryo E14.5.CNhs10578.420-27D27.29
whole body, embryo E14.CNhs10519.395-14B113.62
whole body, embryo E16.CNhs10514.453-14F212.87
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.27
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.88
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.65
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.88
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.48
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.37
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.45
whole body, embryo E17.5.CNhs10513.490-9F99.84
whole body, embryo E17.CNhs10517.475-3I59.49
whole body, embryo E18.CNhs10516.493-3B37.72
whole body, neonate N00.CNhs10525.657-19C26.88
whole body, neonate N01.CNhs10576.659-23C67.27
whole body, neonate N06.CNhs10515.692-21D19.04
whole body, neonate N10.CNhs10518.761-6B49.04





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell4.03e-1644
neurectodermal cell4.03e-1644
neural cell1.46e-1543
CNS neuron (sensu Vertebrata)4.98e-1223
neuroblast (sensu Vertebrata)4.98e-1223
neuron9.59e-1233
neuronal stem cell9.59e-1233
neuroblast9.59e-1233
electrically signaling cell9.59e-1233
embryonic cell3.10e-0970
electrically responsive cell3.78e-0939
electrically active cell3.78e-0939

Uber anatomy
Ontology termp-valuen
central nervous system4.98e-2273
nervous system1.01e-2175
ectoderm-derived structure2.74e-1895
ectoderm2.74e-1895
presumptive ectoderm2.74e-1895
structure with developmental contribution from neural crest2.85e-1792
neurectoderm3.62e-1764
neural plate3.62e-1764
presumptive neural plate3.62e-1764
regional part of nervous system5.42e-1754
neural tube7.30e-1652
neural rod7.30e-1652
future spinal cord7.30e-1652
neural keel7.30e-1652
ecto-epithelium3.25e-1573
tube7.52e-13114
regional part of brain2.97e-1246
brain4.63e-1247
future brain4.63e-1247
pre-chordal neural plate9.63e-1249
anatomical conduit5.08e-11122
anterior neural tube9.37e-1140
regional part of forebrain2.54e-1039
forebrain2.54e-1039
future forebrain2.54e-1039
gray matter1.33e-0934
cell layer7.54e-07176
brain grey matter9.05e-0729
regional part of telencephalon9.05e-0729
telencephalon9.05e-0729
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