FFCP PHASE1:Mm9::chr10:23571260..23571295,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=26464 | |EntrezGene=26464 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=96 | |||
|TSSclassifier=NA | |||
|UniProt=Q9QZ25 | |UniProt=Q9QZ25 | ||
|association_with_transcript=0bp_to_ENSMUST00000020190,NM_011979,uc007eqb.2_5end | |association_with_transcript=0bp_to_ENSMUST00000020190,NM_011979,uc007eqb.2_5end | ||
|cluster_id=chr10:23571260..23571295,+ | |||
|description=CAGE_peak_1_at_Vnn3_5end | |description=CAGE_peak_1_at_Vnn3_5end | ||
|id=chr10:23571260..23571295,+ | |id=chr10:23571260..23571295,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!3.89e-12!25;UBERON:0002330!3.89e-12!25;UBERON:0002107!3.09e-11!22;UBERON:0007499!3.09e-11!22;UBERON:0006925!3.09e-11!22;UBERON:0009497!3.09e-11!22;UBERON:0000015!3.09e-11!22;UBERON:0002423!3.09e-11!22;UBERON:0006235!3.09e-11!22;UBERON:0008835!3.09e-11!22;UBERON:0003894!3.09e-11!22;UBERON:0004161!3.09e-11!22;UBERON:0008836!3.09e-11!22;UBERON:0009854!2.75e-10!23;UBERON:0009856!2.75e-10!23;UBERON:0005256!5.58e-10!47;UBERON:0009569!8.96e-09!66;UBERON:0000466!9.00e-08!79;UBERON:0005172!1.24e-07!49;UBERON:0005173!1.24e-07!49;UBERON:0002417!1.24e-07!49;UBERON:0000916!1.24e-07!49 | |ontology_enrichment_uberon=UBERON:0002365!3.89e-12!25;UBERON:0002330!3.89e-12!25;UBERON:0002107!3.09e-11!22;UBERON:0007499!3.09e-11!22;UBERON:0006925!3.09e-11!22;UBERON:0009497!3.09e-11!22;UBERON:0000015!3.09e-11!22;UBERON:0002423!3.09e-11!22;UBERON:0006235!3.09e-11!22;UBERON:0008835!3.09e-11!22;UBERON:0003894!3.09e-11!22;UBERON:0004161!3.09e-11!22;UBERON:0008836!3.09e-11!22;UBERON:0009854!2.75e-10!23;UBERON:0009856!2.75e-10!23;UBERON:0005256!5.58e-10!47;UBERON:0009569!8.96e-09!66;UBERON:0000466!9.00e-08!79;UBERON:0005172!1.24e-07!49;UBERON:0005173!1.24e-07!49;UBERON:0002417!1.24e-07!49;UBERON:0000916!1.24e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,3.34e-16,25;UBERON:0002330,3.34e-16,25;UBERON:0002107,7.04e-15,22;UBERON:0007499,7.04e-15,22;UBERON:0006925,7.04e-15,22;UBERON:0009497,7.04e-15,22;UBERON:0000015,7.04e-15,22;UBERON:0002423,7.04e-15,22;UBERON:0006235,7.04e-15,22;UBERON:0008835,7.04e-15,22;UBERON:0003894,7.04e-15,22;UBERON:0004161,7.04e-15,22;UBERON:0008836,7.04e-15,22;UBERON:0009854,6.28e-14,23;UBERON:0009856,6.28e-14,23;UBERON:0005256,4.09e-12,45;UBERON:0009569,5.29e-11,66;UBERON:0005172,2.20e-10,49;UBERON:0005173,2.20e-10,49;UBERON:0002417,2.20e-10,49;UBERON:0000916,2.20e-10,49;UBERON:0005177,1.72e-08,79;UBERON:0002100,3.54e-08,90;UBERON:0003104,3.51e-07,61;UBERON:0009142,3.51e-07,61 | |||
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|phase1_expression=0,1.04692622291808,0.909998478779072,0,0.500895729946347,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0.333109761815663,1.41732687172878,0.699561878128147,1.41957974411207,0.548457734422955,0.84877930359606,0.17008658030214,0,0,0.159992422793407,0,0,0,0.430942465371778,0.380046838912748,0.504060259519861,0.665191531965914,0,0,0,0,0,0,15.9042019680025,9.37602413428561,8.89990364755457,59.9996117791635,51.9114568568419,21.3624555333708,0.125896817975577,0.304130793658544,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.9734862815295,23.1190253460635,22.1278308571505,86.42026352054,73.476409483963,6.31999890592883,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,9.47726201668198,2.07150306917737,1.33597925158342,0,2.13125834818499,2.53677046981664,3.16517545160507,7.99603208522793,6.78599593180248,0,7.08536848907567,1.76922110389975,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,1.49288364732112,0.252722758433675,1.89397670297827,0,0,0,0.60281927134286,0.136072998302656,0,0.0937017245597288,1.29351685369508,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0.162137619091711,0,0.219550115291051,0.134206418760372,0,0,0,0.264450566663544,0,0,0.128867461322093,0,0,1.14135375667535,0,0,1.50801125280162,0.596869416123452,0.58489226135736,0,0,0,0,0,0,0,0,0.280543279561274,0,0,0,0.123397163921801,73.8167041447001,0,0.196558995113203,0.449724224769707,1.42002084971952,11.3353265083636,41.5040138403714,118.530808629734,129.383910966478,123.003513108261,240.092904900682,175.650527299534,136.360463151063,80.8252409430758,66.1976455895856,79.6031810249556,7.02062122633098,0,0,0,0,0.670025029767263,8.09348379012447,5.46374214001837,2.83743259391144,2.6575762757853,0.797273843287435,3.93271955317771,3.28101465545202,4.05017364028232,0,2.71952841909355,2.95058563811422,3.86311444826625,0,0,0,1.76729649043061,0,0,0,0,0,0.283076530788832,0,0,0.395287777946524,0,1.41940085208269,2.13678724400706,0,0.329940245945071,0,0.242780636154981,0,0,0,0.922305443831782,1.03371317267288,0.363533729477506,2.49548164869305,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0.493647061806363,0,0,0,0.220528398054962,1.48397627647332,0.161464426695906,0.542816324353403,0.716234064018819,0.492422699235184,0,0,2.05045056957423,2.06386867963222,5.00025223898222,1.13021074202815,0.546776910884101,0,0,0.139951452323658,0.138199973804424,0.954670618015114,0,0.406638934253697,0,0,1.09181281873089,4.72025212346872,15.9521169549898,0,0.388844919875379,1.24267862617385,0.56369293868419,0,0,0.583353565032143,0.904118764344118,0.168956125490778,0.58678619322877,3.3853140059427,0,0,0,0.632022241256357,0,0,0.25984164595559,0.358053391334963,0.596044064343795,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331,0.201652370273681,0.292373642219257,0.192423683280659,0.350630706544707,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0.549454872801795,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,2.75765262675021,10.0011027510727,9.06554251851134,6.73930340142812,6.82282471762253,10.3926512954998,9.05406438653166,7.67860361253036,7.42691767896484,5.6286759576501,6.66811167796303,4.40360438590451,5.40145817298374,7.41754621445952,9.56792980873583,7.88599280486455,6.56660482789549,9.29901140794552,7.1219744149841,8.37573485696442,5.66917872874233,6.40247905054704,7.3659519202596,7.33342214767654,9.53941861818155,4.38949567059444,4.0386837773981,6.54769669071503,6.50734732981057,8.68079749415136,0.249810577937946,11.2287172053796,18.0491685400571,0.191288332068843,2.42650561031467,0.927471342481686 | ||
|short_description=p1@Vnn3 | |short_description=p1@Vnn3 | ||
}} | }} |
Latest revision as of 21:51, 25 September 2015
Short description: | p1@Vnn3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Vnn3_5end |
Coexpression cluster: | MCL_coexpression_mm9:96 |
Association with transcript: | 0bp_to_ENSMUST00000020190, NM_011979, uc007eqb.2_5end |
EntrezGene: | Vnn3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 3.34e-16 | 25 |
exocrine system | 3.34e-16 | 25 |
liver | 7.04e-15 | 22 |
epithelial sac | 7.04e-15 | 22 |
digestive gland | 7.04e-15 | 22 |
epithelium of foregut-midgut junction | 7.04e-15 | 22 |
anatomical boundary | 7.04e-15 | 22 |
hepatobiliary system | 7.04e-15 | 22 |
foregut-midgut junction | 7.04e-15 | 22 |
hepatic diverticulum | 7.04e-15 | 22 |
liver primordium | 7.04e-15 | 22 |
septum transversum | 7.04e-15 | 22 |
liver bud | 7.04e-15 | 22 |
digestive tract diverticulum | 6.28e-14 | 23 |
sac | 6.28e-14 | 23 |
trunk mesenchyme | 4.09e-12 | 45 |
subdivision of trunk | 5.29e-11 | 66 |
abdomen element | 2.20e-10 | 49 |
abdominal segment element | 2.20e-10 | 49 |
abdominal segment of trunk | 2.20e-10 | 49 |
abdomen | 2.20e-10 | 49 |
trunk region element | 1.72e-08 | 79 |
trunk | 3.54e-08 | 90 |
mesenchyme | 3.51e-07 | 61 |
entire embryonic mesenchyme | 3.51e-07 | 61 |