FFCP PHASE1:Mm9::chr2:152656294..152656322,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=12048|HGNC=|MCL_coexpression_id=38|UniProt=A2AHX8|association_with_transcript=31bp_to_ENSMUST00000146380_5end|description=CAGE_peak_6_at_Bcl2l1_5end|id=chr2:152656294..152656322,-|ontology_enrichment_celltype=CL:0000333!2.72e-07!10;CL:0000095!2.72e-07!10;CL:0000243!2.72e-07!10;CL:0000123!2.72e-07!10;CL:0000125!2.72e-07!10;CL:0000030!2.72e-07!10;CL:0000339!2.72e-07!10|ontology_enrichment_celltype_v019_2=CL:0000333,3.51e-08,10;CL:0000095,3.51e-08,10;CL:0000243,3.51e-08,10;CL:0000123,3.51e-08,10;CL:0000125,3.51e-08,10;CL:0000030,3.51e-08,10;CL:0000339,3.51e-08,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.13e-09!70;UBERON:0002107!1.92e-09!22;UBERON:0007499!1.92e-09!22;UBERON:0006925!1.92e-09!22;UBERON:0009497!1.92e-09!22;UBERON:0000015!1.92e-09!22;UBERON:0002423!1.92e-09!22;UBERON:0006235!1.92e-09!22;UBERON:0008835!1.92e-09!22;UBERON:0003894!1.92e-09!22;UBERON:0004161!1.92e-09!22;UBERON:0008836!1.92e-09!22;UBERON:0000490!2.66e-09!66;UBERON:0005057!1.44e-08!51;UBERON:0003914!2.45e-08!47;UBERON:0009854!2.61e-08!23;UBERON:0009856!2.61e-08!23;UBERON:0005256!5.55e-08!47;UBERON:0009569!9.01e-08!66;UBERON:0003929!1.48e-07!55;UBERON:0005172!2.40e-07!49;UBERON:0005173!2.40e-07!49;UBERON:0002417!2.40e-07!49;UBERON:0000916!2.40e-07!49;UBERON:0002365!3.67e-07!25;UBERON:0002330!3.67e-07!25;UBERON:0005911!5.16e-07!69;UBERON:0002100!8.71e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0000490,1.09e-10,66;UBERON:0002107,1.16e-10,22;UBERON:0007499,1.16e-10,22;UBERON:0006925,1.16e-10,22;UBERON:0009497,1.16e-10,22;UBERON:0000015,1.16e-10,22;UBERON:0002423,1.16e-10,22;UBERON:0006235,1.16e-10,22;UBERON:0008835,1.16e-10,22;UBERON:0003894,1.16e-10,22;UBERON:0004161,1.16e-10,22;UBERON:0008836,1.16e-10,22;UBERON:0009854,9.06e-10,23;UBERON:0009856,9.06e-10,23;UBERON:0003929,6.54e-09,55;UBERON:0003914,3.07e-08,47;UBERON:0002365,3.12e-08,25;UBERON:0002330,3.12e-08,25;UBERON:0005911,4.93e-08,69;UBERON:0005256,1.35e-07,45;UBERON:0009569,6.41e-07,66;UBERON:0001041,6.63e-07,80|phase1_expression=0.320297694209588,2.09385244583617,1.36499771816861,3.93203474698879,3.50627010962443,1.34303417529512,1.86890112476421,0.258246646883153,1.54867594366833,1.87251621057595,1.71217968225505,2.07407613387875,0.171200729931206,0.0874204024189974,1.99865857089398,6.47920855647443,4.19737126876888,0,0.274228867211478,0,2.12608225377674,0.297872853602656,0.261199789138935,2.71987118748791,2.52350209173887,3.44539178469012,4.73838195774982,3.23206849028834,1.14014051673824,1.00812051903972,0.665191531965914,0,0,0,0.288851619751275,0,0.408338712524738,0.837063261473815,2.3440060335714,0,0.588231488031014,0.683045484958446,0,6.6725313527056,6.48812359804893,6.79122982998222,3.9119567217402,6.32272953503295,6.81027166476863,10.1103547518627,6.01941612989059,4.31257693094915,0,0,0,18.5226793945882,6.30373567865265,13.9231464914909,0.404632921719196,0.528990979272033,0,3.04960078862219,1.77858959222228,21.5975932147536,54.3876499411836,30.5506449426823,14.081205194365,7.68436610643109,0.207379224616955,0,0.210324961351382,1.99955689082663,1.10434270475807,0.122490799214954,0.191690942036473,0,1.10115880999389,1.14918604276669,2.15049146558741,0.131886287730194,0.548925861614458,1.56274011167028,1.67509799400829,2.25105044012672,0.916789486660861,0.589257170947335,0.427115042397309,0.186399445825301,14.6151553133045,8.01058537131927,9.56552812715537,4.30211938490693,35.358509352803,5.93673510801599,6.49776417447669,1.79210754838934,1.96622188184453,0.170430322578058,0,0.70667914902068,0.704217098883403,1.28326477414318,0,0,4.11332977921307,3.54703811665138,4.54972000513305,4.11061966988616,0.258937883647172,0.742210695324124,0.693941307064543,1.52232739156071,1.38369298353635,0.753613202763113,1.29347577849275,0.251333182659351,5.6854842578906,1.01219549843938,0.884610551949874,0.647067399789637,0.220841518460394,0.484875253135222,0,2.34224637609238,2.72280718857492,0,0,0,0,1.19832511523858,0.457500602818626,0.376963056338593,0.869121600961382,1.02286182932132,0,1.29793010454206,0.509196819251581,2.73695335342205,0.758168275301024,0.631325567659422,0.390361328888111,0,0.180062129805349,1.20563854268572,1.63287597963187,0.896796041993948,1.59292931751539,0.258703370739016,0.215567992932842,0.378212160335639,0,0.43839146485515,1.66828349535359,1.0447564995665,0.61734640922383,0.199034266818493,0,0,0,0.621377317606506,1.40715635988658,0.720248245844059,0.23674473558521,0,0.308534225774757,0.697601834251224,0.268273401399619,1.5179494507732,0.658239399653922,0.820837320395476,1.54030738137126,2.04679982395465,1.3173006917463,1.74468344388483,0.420579897128254,0.411618449517138,1.98251269790279,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0,0.474529061544512,1.64698954724011,0.502670417600539,0.596869416123452,0.58489226135736,0,0,0.398282546508734,0.379335801906163,0.571242563048644,1.1270773567308,1.22190796707189,0.775809948670503,2.17421041659988,1.96033265085198,1.03327103585722,1.41298855057237,4.07210640941942,1.77871576252289,1.83529616287703,2.16214894624523,2.02375901146368,3.65148218499305,3.37648023653384,2.29163266603278,4.02774592431135,5.83686816390127,3.29473695825698,1.43768206527355,5.58211421502755,5.92871578917665,2.02063102357689,3.22915344339442,2.8946611281802,1.47802552133284,0.189491411770485,0.651859905768103,0.339490171550376,1.17345124144251,0.670025029767263,0.714130922658041,5.85400943573396,1.26108115284953,1.99318220683897,0,2.29408640602033,1.20879487306127,2.16973587872267,22.6186925908908,11.4220193601929,0,0.275936746304732,0.481651769963376,2.57865710502847,1.3114795630134,0.504941854408746,0.631016438832513,1.56175497718655,0.861693590931196,0.238968797952552,1.11399337041197,1.69845918473299,1.21443210502468,2.92255857911312,1.97643888973262,0,0.567760340833074,0.534196811001766,0.162886959353576,0.824850614862677,0,0.728341908464944,0.604647113929502,0.565815239267694,0.590603785761546,0.307435147943927,0.775284879504663,1.45413491791002,1.78248689192361,0.316036757935816,1.05418608574999,1.03135543248187,0,0.720244376125241,0,0.214337035031592,0.177340233642274,0.356737635204141,0.658196082408484,2.13125464380219,2.58138878870081,4.87213762986786,0.661585194164886,1.48397627647332,1.13025098687134,0.965006798850494,1.55184047204077,1.80554989719567,0.874442509889552,0.556275906031529,0.854354403989263,0.412773735926445,1.48155621895769,5.83942216714542,2.05041341581538,3.88922894451088,0.169978429993855,0.279902904647316,0.552799895217695,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0.655087691238533,1.61837215661785,0.826534557253359,1.04702376793612,0,0.621339313086926,0.56369293868419,1.04661582230785,0.496375471371293,0.194451188344048,0.387479470433193,0.506868376472335,1.17357238645754,0.651021924219751,1.25831213310853,0,0,3.16011120628178,0.608175645870493,0.102710957164827,0.25984164595559,0.716106782669926,0.993406773906324,3.24527713703916,2.95379054349154,4.4425237977185,4.11516755936999,3.83139503519994,3.80085734885034,1.82802499116626,4.55819918508119,1.36038230169127,0.665957860122194,0.717710852875806,0.839423081820392,0.965947970160952,3.00291960721891,0.915758121336325,0.857473516316263,0.501572104035363,1.12950368523413,0,1.14579102687879,1.03111909406213,1.37016503954128,0.755393897389701,1.35004500046361,0.45032120322422,0.906284817968409,0,0.415149390336707,0,0.853668028770671,0.486213434136588,0.628839487883947,1.10306105070008,0.666740183404846,1.23621034343337,1.92551525755089,1.26348605881899,1.01391719956096,1.13175804831646,1.49826411951812,1.28050304809739,1.32101578597911,2.38146845641537,0.579421629724277,1.15745532278223,0.412085900803307,1.61918812147837,0.342869252385415,1.4198064492747,0.953744759789284,0.726732083161643,1.12931256498397,1.52306294205018,2.19513567447327,2.10455769150274,1.62964936615034,2.80571135828869,1.42362021749009,1.57607171800902,1.22769312950907,1.70430525304563,0.578719832943424,0,0,0.429742108096597,1.53030665655075,0.661774257358546,0.231867835620421|short_description=p6@Bcl2l1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12048 | |||
|HGNC= | |||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt=A2AHX8 | |||
|association_with_transcript=31bp_to_ENSMUST00000146380_5end | |||
|cluster_id=chr2:152656294..152656322,- | |||
|description=CAGE_peak_6_at_Bcl2l1_5end | |||
|id=chr2:152656294..152656322,- | |||
|ontology_enrichment_celltype=CL:0000333!2.72e-07!10;CL:0000095!2.72e-07!10;CL:0000243!2.72e-07!10;CL:0000123!2.72e-07!10;CL:0000125!2.72e-07!10;CL:0000030!2.72e-07!10;CL:0000339!2.72e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,3.51e-08,10;CL:0000095,3.51e-08,10;CL:0000243,3.51e-08,10;CL:0000123,3.51e-08,10;CL:0000125,3.51e-08,10;CL:0000030,3.51e-08,10;CL:0000339,3.51e-08,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.13e-09!70;UBERON:0002107!1.92e-09!22;UBERON:0007499!1.92e-09!22;UBERON:0006925!1.92e-09!22;UBERON:0009497!1.92e-09!22;UBERON:0000015!1.92e-09!22;UBERON:0002423!1.92e-09!22;UBERON:0006235!1.92e-09!22;UBERON:0008835!1.92e-09!22;UBERON:0003894!1.92e-09!22;UBERON:0004161!1.92e-09!22;UBERON:0008836!1.92e-09!22;UBERON:0000490!2.66e-09!66;UBERON:0005057!1.44e-08!51;UBERON:0003914!2.45e-08!47;UBERON:0009854!2.61e-08!23;UBERON:0009856!2.61e-08!23;UBERON:0005256!5.55e-08!47;UBERON:0009569!9.01e-08!66;UBERON:0003929!1.48e-07!55;UBERON:0005172!2.40e-07!49;UBERON:0005173!2.40e-07!49;UBERON:0002417!2.40e-07!49;UBERON:0000916!2.40e-07!49;UBERON:0002365!3.67e-07!25;UBERON:0002330!3.67e-07!25;UBERON:0005911!5.16e-07!69;UBERON:0002100!8.71e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,1.09e-10,66;UBERON:0002107,1.16e-10,22;UBERON:0007499,1.16e-10,22;UBERON:0006925,1.16e-10,22;UBERON:0009497,1.16e-10,22;UBERON:0000015,1.16e-10,22;UBERON:0002423,1.16e-10,22;UBERON:0006235,1.16e-10,22;UBERON:0008835,1.16e-10,22;UBERON:0003894,1.16e-10,22;UBERON:0004161,1.16e-10,22;UBERON:0008836,1.16e-10,22;UBERON:0009854,9.06e-10,23;UBERON:0009856,9.06e-10,23;UBERON:0003929,6.54e-09,55;UBERON:0003914,3.07e-08,47;UBERON:0002365,3.12e-08,25;UBERON:0002330,3.12e-08,25;UBERON:0005911,4.93e-08,69;UBERON:0005256,1.35e-07,45;UBERON:0009569,6.41e-07,66;UBERON:0001041,6.63e-07,80 | |||
|phase1_expression=0.320297694209588,2.09385244583617,1.36499771816861,3.93203474698879,3.50627010962443,1.34303417529512,1.86890112476421,0.258246646883153,1.54867594366833,1.87251621057595,1.71217968225505,2.07407613387875,0.171200729931206,0.0874204024189974,1.99865857089398,6.47920855647443,4.19737126876888,0,0.274228867211478,0,2.12608225377674,0.297872853602656,0.261199789138935,2.71987118748791,2.52350209173887,3.44539178469012,4.73838195774982,3.23206849028834,1.14014051673824,1.00812051903972,0.665191531965914,0,0,0,0.288851619751275,0,0.408338712524738,0.837063261473815,2.3440060335714,0,0.588231488031014,0.683045484958446,0,6.6725313527056,6.48812359804893,6.79122982998222,3.9119567217402,6.32272953503295,6.81027166476863,10.1103547518627,6.01941612989059,4.31257693094915,0,0,0,18.5226793945882,6.30373567865265,13.9231464914909,0.404632921719196,0.528990979272033,0,3.04960078862219,1.77858959222228,21.5975932147536,54.3876499411836,30.5506449426823,14.081205194365,7.68436610643109,0.207379224616955,0,0.210324961351382,1.99955689082663,1.10434270475807,0.122490799214954,0.191690942036473,0,1.10115880999389,1.14918604276669,2.15049146558741,0.131886287730194,0.548925861614458,1.56274011167028,1.67509799400829,2.25105044012672,0.916789486660861,0.589257170947335,0.427115042397309,0.186399445825301,14.6151553133045,8.01058537131927,9.56552812715537,4.30211938490693,35.358509352803,5.93673510801599,6.49776417447669,1.79210754838934,1.96622188184453,0.170430322578058,0,0.70667914902068,0.704217098883403,1.28326477414318,0,0,4.11332977921307,3.54703811665138,4.54972000513305,4.11061966988616,0.258937883647172,0.742210695324124,0.693941307064543,1.52232739156071,1.38369298353635,0.753613202763113,1.29347577849275,0.251333182659351,5.6854842578906,1.01219549843938,0.884610551949874,0.647067399789637,0.220841518460394,0.484875253135222,0,2.34224637609238,2.72280718857492,0,0,0,0,1.19832511523858,0.457500602818626,0.376963056338593,0.869121600961382,1.02286182932132,0,1.29793010454206,0.509196819251581,2.73695335342205,0.758168275301024,0.631325567659422,0.390361328888111,0,0.180062129805349,1.20563854268572,1.63287597963187,0.896796041993948,1.59292931751539,0.258703370739016,0.215567992932842,0.378212160335639,0,0.43839146485515,1.66828349535359,1.0447564995665,0.61734640922383,0.199034266818493,0,0,0,0.621377317606506,1.40715635988658,0.720248245844059,0.23674473558521,0,0.308534225774757,0.697601834251224,0.268273401399619,1.5179494507732,0.658239399653922,0.820837320395476,1.54030738137126,2.04679982395465,1.3173006917463,1.74468344388483,0.420579897128254,0.411618449517138,1.98251269790279,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0,0.474529061544512,1.64698954724011,0.502670417600539,0.596869416123452,0.58489226135736,0,0,0.398282546508734,0.379335801906163,0.571242563048644,1.1270773567308,1.22190796707189,0.775809948670503,2.17421041659988,1.96033265085198,1.03327103585722,1.41298855057237,4.07210640941942,1.77871576252289,1.83529616287703,2.16214894624523,2.02375901146368,3.65148218499305,3.37648023653384,2.29163266603278,4.02774592431135,5.83686816390127,3.29473695825698,1.43768206527355,5.58211421502755,5.92871578917665,2.02063102357689,3.22915344339442,2.8946611281802,1.47802552133284,0.189491411770485,0.651859905768103,0.339490171550376,1.17345124144251,0.670025029767263,0.714130922658041,5.85400943573396,1.26108115284953,1.99318220683897,0,2.29408640602033,1.20879487306127,2.16973587872267,22.6186925908908,11.4220193601929,0,0.275936746304732,0.481651769963376,2.57865710502847,1.3114795630134,0.504941854408746,0.631016438832513,1.56175497718655,0.861693590931196,0.238968797952552,1.11399337041197,1.69845918473299,1.21443210502468,2.92255857911312,1.97643888973262,0,0.567760340833074,0.534196811001766,0.162886959353576,0.824850614862677,0,0.728341908464944,0.604647113929502,0.565815239267694,0.590603785761546,0.307435147943927,0.775284879504663,1.45413491791002,1.78248689192361,0.316036757935816,1.05418608574999,1.03135543248187,0,0.720244376125241,0,0.214337035031592,0.177340233642274,0.356737635204141,0.658196082408484,2.13125464380219,2.58138878870081,4.87213762986786,0.661585194164886,1.48397627647332,1.13025098687134,0.965006798850494,1.55184047204077,1.80554989719567,0.874442509889552,0.556275906031529,0.854354403989263,0.412773735926445,1.48155621895769,5.83942216714542,2.05041341581538,3.88922894451088,0.169978429993855,0.279902904647316,0.552799895217695,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0.655087691238533,1.61837215661785,0.826534557253359,1.04702376793612,0,0.621339313086926,0.56369293868419,1.04661582230785,0.496375471371293,0.194451188344048,0.387479470433193,0.506868376472335,1.17357238645754,0.651021924219751,1.25831213310853,0,0,3.16011120628178,0.608175645870493,0.102710957164827,0.25984164595559,0.716106782669926,0.993406773906324,3.24527713703916,2.95379054349154,4.4425237977185,4.11516755936999,3.83139503519994,3.80085734885034,1.82802499116626,4.55819918508119,1.36038230169127,0.665957860122194,0.717710852875806,0.839423081820392,0.965947970160952,3.00291960721891,0.915758121336325,0.857473516316263,0.501572104035363,1.12950368523413,0,1.14579102687879,1.03111909406213,1.37016503954128,0.755393897389701,1.35004500046361,0.45032120322422,0.906284817968409,0,0.415149390336707,0,0.853668028770671,0.486213434136588,0.628839487883947,1.10306105070008,0.666740183404846,1.23621034343337,1.92551525755089,1.26348605881899,1.01391719956096,1.13175804831646,1.49826411951812,1.28050304809739,1.32101578597911,2.38146845641537,0.579421629724277,1.15745532278223,0.412085900803307,1.61918812147837,0.342869252385415,1.4198064492747,0.953744759789284,0.726732083161643,1.12931256498397,1.52306294205018,2.19513567447327,2.10455769150274,1.62964936615034,2.80571135828869,1.42362021749009,1.57607171800902,1.22769312950907,1.70430525304563,0.578719832943424,0,0,0.429742108096597,1.53030665655075,0.661774257358546,0.231867835620421 | |||
|short_description=p6@Bcl2l1 | |||
}} |
Latest revision as of 22:23, 25 September 2015
Short description: | p6@Bcl2l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Bcl2l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | 31bp_to_ENSMUST00000146380_5end |
EntrezGene: | Bcl2l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 3.51e-08 | 10 |
neuron associated cell | 3.51e-08 | 10 |
glial cell (sensu Vertebrata) | 3.51e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 3.51e-08 | 10 |
glial cell | 3.51e-08 | 10 |
glioblast | 3.51e-08 | 10 |
glioblast (sensu Vertebrata) | 3.51e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 1.09e-10 | 66 |
liver | 1.16e-10 | 22 |
epithelial sac | 1.16e-10 | 22 |
digestive gland | 1.16e-10 | 22 |
epithelium of foregut-midgut junction | 1.16e-10 | 22 |
anatomical boundary | 1.16e-10 | 22 |
hepatobiliary system | 1.16e-10 | 22 |
foregut-midgut junction | 1.16e-10 | 22 |
hepatic diverticulum | 1.16e-10 | 22 |
liver primordium | 1.16e-10 | 22 |
septum transversum | 1.16e-10 | 22 |
liver bud | 1.16e-10 | 22 |
digestive tract diverticulum | 9.06e-10 | 23 |
sac | 9.06e-10 | 23 |
gut epithelium | 6.54e-09 | 55 |
epithelial tube | 3.07e-08 | 47 |
exocrine gland | 3.12e-08 | 25 |
exocrine system | 3.12e-08 | 25 |
endo-epithelium | 4.93e-08 | 69 |
trunk mesenchyme | 1.35e-07 | 45 |
subdivision of trunk | 6.41e-07 | 66 |
foregut | 6.63e-07 | 80 |