FFCP PHASE1:Mm9::chr2:155102453..155102508,+: Difference between revisions
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{{FFCP|EntrezGene=66734|HGNC=|MCL_coexpression_id=0|UniProt=|association_with_transcript=-116bp_to_ENSMUST00000154596_5end|description=CAGE_peak_6_at_Map1lc3a_5end|id=chr2:155102453..155102508,+|ontology_enrichment_celltype=CL:0000221!1.07e-15!44;CL:0000133!1.07e-15!44;CL:0002319!1.18e-15!43;CL:0000117!2.86e-14!23;CL:0000337!2.86e-14!23;CL:0000540!1.15e-13!33;CL:0000047!1.15e-13!33;CL:0000031!1.15e-13!33;CL:0000404!1.15e-13!33;CL:0000055!2.82e-13!50;CL:0000393!6.97e-12!39;CL:0000211!6.97e-12!39|ontology_enrichment_celltype_v019_2=CL:0000117,4.80e-20,23;CL:0000337,4.80e-20,23;CL:0002319,1.40e-17,43;CL:0000221,6.83e-17,44;CL:0000133,6.83e-17,44;CL:0000540,1.36e-15,33;CL:0000047,1.36e-15,33;CL:0000031,1.36e-15,33;CL:0000404,1.36e-15,33;CL:0000393,1.93e-12,39;CL:0000211,1.93e-12,39;CL:0002321,6.41e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.81e-31!75;UBERON:0001016!1.81e-31!75;UBERON:0001017!7.41e-31!73;UBERON:0005743!7.41e-31!73;UBERON:0002346!1.99e-26!71;UBERON:0003075!1.99e-26!71;UBERON:0007284!1.99e-26!71;UBERON:0004121!2.92e-26!102;UBERON:0000924!2.92e-26!102;UBERON:0006601!2.92e-26!102;UBERON:0001049!3.97e-25!52;UBERON:0005068!3.97e-25!52;UBERON:0006241!3.97e-25!52;UBERON:0007135!3.97e-25!52;UBERON:0000955!1.54e-23!50;UBERON:0006238!1.54e-23!50;UBERON:0000033!2.54e-23!63;UBERON:0002616!5.58e-23!49;UBERON:0002020!7.81e-20!34;UBERON:0003056!8.55e-20!49;UBERON:0003080!1.15e-18!40;UBERON:0002780!4.24e-18!39;UBERON:0001890!4.24e-18!39;UBERON:0006240!4.24e-18!39;UBERON:0002791!2.25e-16!29;UBERON:0003528!2.25e-16!29;UBERON:0001893!2.25e-16!29;UBERON:0000956!1.24e-11!21;UBERON:0001869!1.24e-11!21;UBERON:0000203!1.24e-11!21;UBERON:0007811!6.03e-10!86;UBERON:0002619!6.88e-10!17;UBERON:0000025!7.44e-10!114;UBERON:0000153!1.79e-08!94;UBERON:0004111!1.87e-08!122;UBERON:0002021!2.51e-07!10;UBERON:0000411!2.51e-07!10;UBERON:0001950!2.51e-07!10;UBERON:0003076!4.97e-07!12;UBERON:0003057!4.97e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.01e-36,75;UBERON:0001017,7.73e-36,73;UBERON:0000073,1.10e-33,54;UBERON:0002346,1.01e-31,64;UBERON:0003075,1.01e-31,64;UBERON:0007284,1.01e-31,64;UBERON:0001049,1.49e-31,52;UBERON:0005068,1.49e-31,52;UBERON:0006241,1.49e-31,52;UBERON:0007135,1.49e-31,52;UBERON:0004121,2.44e-30,95;UBERON:0000924,2.44e-30,95;UBERON:0006601,2.44e-30,95;UBERON:0002020,3.72e-28,34;UBERON:0010314,6.85e-27,92;UBERON:0010371,1.40e-26,73;UBERON:0000955,1.92e-26,47;UBERON:0006238,1.92e-26,47;UBERON:0002616,1.15e-25,46;UBERON:0003080,2.93e-23,40;UBERON:0003056,3.07e-23,49;UBERON:0003528,4.12e-23,29;UBERON:0002791,4.12e-23,29;UBERON:0001893,4.12e-23,29;UBERON:0002780,1.86e-22,39;UBERON:0001890,1.86e-22,39;UBERON:0006240,1.86e-22,39;UBERON:0000956,3.31e-16,21;UBERON:0001869,3.31e-16,21;UBERON:0000203,3.31e-16,21;UBERON:0002619,1.14e-13,17;UBERON:0000025,8.32e-12,114;UBERON:0004111,1.67e-10,122;UBERON:0002021,5.96e-10,10;UBERON:0000411,5.96e-10,10;UBERON:0001950,5.96e-10,10;UBERON:0003076,1.40e-08,12;UBERON:0003057,1.40e-08,12;UBERON:0002420,4.86e-08,8;UBERON:0007245,4.86e-08,8;UBERON:0010009,4.86e-08,8;UBERON:0010011,4.86e-08,8;UBERON:0000454,4.86e-08,8;UBERON:0002240,6.56e-07,6;UBERON:0005174,6.56e-07,6;UBERON:0001137,6.56e-07,6|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,23.7270779521485,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.917733760808408,0.782391344348039,1.09012578190223,1.31811709640683,2.13872888981712,0.279972843250725,4.31257693094915,0.167782606057736,0,0,1.02903774414379,0.286533439938757,0,8.29497489524351,7.93486468908049,12.6766280701236,0.677689064138264,0,0,0,1.4209602298922,1.19840044207362,3.07374644257244,2.69592992002042,3.51015439662396,2.52389953621658,19.9955689082663,20.7616428494517,2.9397791811589,2.1086003624012,2.75765635983006,13.2139057199266,11.1087984134113,13.3637683932932,11.2103344570665,8.59983849862651,8.85552729946492,23.7305549151174,19.6966913511088,13.4462458043593,12.0797720044204,13.810053037513,12.8615617619457,1.21161909333094,1.43585964202892,1.15945795480671,0,1.3599426674155,0,0,0,4.0728881838208,0.340860645156116,1.29893002301434,1.06001872353102,0.845060518660083,0,0,0,0,0.253359865475099,0.505524445014783,2.74041311325744,0,0.29688427812965,1.56136794089522,0.913396434936424,0.461230994512117,1.05505848386836,0.587943535678524,0.251333182659351,0.247194967734374,0,0.884610551949874,0.485300549842228,0,0,0,2.04946557908083,4.1889341362691,0,0.359445373517761,0.599902730993408,0.508280908292259,8.23848516726525,7.77751024791665,2.63874139437015,6.60532416730651,8.95004100656157,13.714010940931,8.59878694259116,0.712875546952214,0,2.0217820674694,0.210441855886474,0.780722657776222,1.37941262660084,1.80062129805349,1.65775299619287,1.29269348387523,1.40925092313335,1.21812241927647,0.776110112217047,0.646703978798527,0.189106080167819,0.527853372491847,0.657587197282725,0,0,0.205782136407943,0.199034266818493,0,0.257347907114715,0.284163499395593,1.24275463521301,1.17263029990548,0.180062061461015,1.42046841351126,0.787056926989615,0.462801338662135,0.465067889500816,0.804820204198858,1.28441876603886,0.822799249567402,1.64167464079095,0.891756905004413,2.19299981137998,1.75640092232841,1.47627060636409,3.57492912559016,3.70456604565424,0,0,0.426576501070468,0.464473343720877,0.257734922644187,0.605050573870028,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0.342745537829186,0,0,0.193952487167626,0.280543279561274,0.189709611372772,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.947457058852424,0,0.678980343100753,0,0.502518772325447,0,0.780534591431195,0,0.44292937929755,0.637819074629948,0.327726629431476,0.518054945597687,0,0,0,0,0,12.2018448390722,10.1974167335217,0.655739781506702,0.757412781613119,0.631016438832513,1.56175497718655,1.29254038639679,0.477937595905104,0.891194696329576,0.283076530788832,1.21443210502468,0.584511715822624,0.395287777946524,4.81981974632711,0.283880170416537,0.534196811001766,0.488660878060728,0,0,0.242780636154981,0.604647113929502,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0.340439605753788,0.900305470156551,2.32845630808958,1.28602221018955,0.532020700926821,1.24858172321449,1.81003922662333,0.913394847343798,0,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0.291480836629851,7.97328798645192,0,0,0.185194527369712,0,0,0,0.509935289981566,1.25956307091292,1.10559979043539,0,0.632671987162271,0,0.648032044930808,0.836353184057875,0.436725127492355,0.134864346384821,0.330613822901344,0,0,0,148.251242873942,0.299033092087958,0,0.972255941720238,1.93739735216597,0.844780627453891,0.352071715937262,0.2604087696879,0.314578033277133,22.2257391159926,41.4763209011326,0,0,0.102710957164827,0.25984164595559,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0.386379188064381,0.187682475451182,0.549454872801795,0,0,7.90652579663893,9.66682996665071,4.58316410751517,15.4667864109319,13.0165678756422,15.8632718451837,11.4753825039407,12.6089936902782,9.9691329976525,16.5683299760582,1.24544817101012,1.59609949360412,1.19513524027894,0.972426868273176,2.30574478890781,2.20612210140017,1.77797382241292,0.618105171716683,0.962757628775446,0.758091635291392,0.50695859978048,0.754505365544305,0.936415074698824,1.21647789569252,1.26358031702349,0.476293691283074,0.347652977834566,0.77163688185482,0,1.03039244094078,0.685738504770831,1.77475806159337,0.715308569841963,1.59881058295561,1.12931256498397,1.01537529470012,0.548783918618318,1.57841826862706,0.950628796921032,1.68342681497322,0.830445126869219,2.06859412988683,1.22769312950907,0.464810523557898,0.964533054905707,3.2475375131933,0.935726433781634,1.07435527024149,1.53030665655075,0.661774257358546,0.231867835620421|short_description=p6@Map1lc3a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66734 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-116bp_to_ENSMUST00000154596_5end | |||
|cluster_id=chr2:155102453..155102508,+ | |||
|description=CAGE_peak_6_at_Map1lc3a_5end | |||
|id=chr2:155102453..155102508,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.07e-15!44;CL:0000133!1.07e-15!44;CL:0002319!1.18e-15!43;CL:0000117!2.86e-14!23;CL:0000337!2.86e-14!23;CL:0000540!1.15e-13!33;CL:0000047!1.15e-13!33;CL:0000031!1.15e-13!33;CL:0000404!1.15e-13!33;CL:0000055!2.82e-13!50;CL:0000393!6.97e-12!39;CL:0000211!6.97e-12!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.80e-20,23;CL:0000337,4.80e-20,23;CL:0002319,1.40e-17,43;CL:0000221,6.83e-17,44;CL:0000133,6.83e-17,44;CL:0000540,1.36e-15,33;CL:0000047,1.36e-15,33;CL:0000031,1.36e-15,33;CL:0000404,1.36e-15,33;CL:0000393,1.93e-12,39;CL:0000211,1.93e-12,39;CL:0002321,6.41e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.81e-31!75;UBERON:0001016!1.81e-31!75;UBERON:0001017!7.41e-31!73;UBERON:0005743!7.41e-31!73;UBERON:0002346!1.99e-26!71;UBERON:0003075!1.99e-26!71;UBERON:0007284!1.99e-26!71;UBERON:0004121!2.92e-26!102;UBERON:0000924!2.92e-26!102;UBERON:0006601!2.92e-26!102;UBERON:0001049!3.97e-25!52;UBERON:0005068!3.97e-25!52;UBERON:0006241!3.97e-25!52;UBERON:0007135!3.97e-25!52;UBERON:0000955!1.54e-23!50;UBERON:0006238!1.54e-23!50;UBERON:0000033!2.54e-23!63;UBERON:0002616!5.58e-23!49;UBERON:0002020!7.81e-20!34;UBERON:0003056!8.55e-20!49;UBERON:0003080!1.15e-18!40;UBERON:0002780!4.24e-18!39;UBERON:0001890!4.24e-18!39;UBERON:0006240!4.24e-18!39;UBERON:0002791!2.25e-16!29;UBERON:0003528!2.25e-16!29;UBERON:0001893!2.25e-16!29;UBERON:0000956!1.24e-11!21;UBERON:0001869!1.24e-11!21;UBERON:0000203!1.24e-11!21;UBERON:0007811!6.03e-10!86;UBERON:0002619!6.88e-10!17;UBERON:0000025!7.44e-10!114;UBERON:0000153!1.79e-08!94;UBERON:0004111!1.87e-08!122;UBERON:0002021!2.51e-07!10;UBERON:0000411!2.51e-07!10;UBERON:0001950!2.51e-07!10;UBERON:0003076!4.97e-07!12;UBERON:0003057!4.97e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.01e-36,75;UBERON:0001017,7.73e-36,73;UBERON:0000073,1.10e-33,54;UBERON:0002346,1.01e-31,64;UBERON:0003075,1.01e-31,64;UBERON:0007284,1.01e-31,64;UBERON:0001049,1.49e-31,52;UBERON:0005068,1.49e-31,52;UBERON:0006241,1.49e-31,52;UBERON:0007135,1.49e-31,52;UBERON:0004121,2.44e-30,95;UBERON:0000924,2.44e-30,95;UBERON:0006601,2.44e-30,95;UBERON:0002020,3.72e-28,34;UBERON:0010314,6.85e-27,92;UBERON:0010371,1.40e-26,73;UBERON:0000955,1.92e-26,47;UBERON:0006238,1.92e-26,47;UBERON:0002616,1.15e-25,46;UBERON:0003080,2.93e-23,40;UBERON:0003056,3.07e-23,49;UBERON:0003528,4.12e-23,29;UBERON:0002791,4.12e-23,29;UBERON:0001893,4.12e-23,29;UBERON:0002780,1.86e-22,39;UBERON:0001890,1.86e-22,39;UBERON:0006240,1.86e-22,39;UBERON:0000956,3.31e-16,21;UBERON:0001869,3.31e-16,21;UBERON:0000203,3.31e-16,21;UBERON:0002619,1.14e-13,17;UBERON:0000025,8.32e-12,114;UBERON:0004111,1.67e-10,122;UBERON:0002021,5.96e-10,10;UBERON:0000411,5.96e-10,10;UBERON:0001950,5.96e-10,10;UBERON:0003076,1.40e-08,12;UBERON:0003057,1.40e-08,12;UBERON:0002420,4.86e-08,8;UBERON:0007245,4.86e-08,8;UBERON:0010009,4.86e-08,8;UBERON:0010011,4.86e-08,8;UBERON:0000454,4.86e-08,8;UBERON:0002240,6.56e-07,6;UBERON:0005174,6.56e-07,6;UBERON:0001137,6.56e-07,6 | |||
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,23.7270779521485,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.917733760808408,0.782391344348039,1.09012578190223,1.31811709640683,2.13872888981712,0.279972843250725,4.31257693094915,0.167782606057736,0,0,1.02903774414379,0.286533439938757,0,8.29497489524351,7.93486468908049,12.6766280701236,0.677689064138264,0,0,0,1.4209602298922,1.19840044207362,3.07374644257244,2.69592992002042,3.51015439662396,2.52389953621658,19.9955689082663,20.7616428494517,2.9397791811589,2.1086003624012,2.75765635983006,13.2139057199266,11.1087984134113,13.3637683932932,11.2103344570665,8.59983849862651,8.85552729946492,23.7305549151174,19.6966913511088,13.4462458043593,12.0797720044204,13.810053037513,12.8615617619457,1.21161909333094,1.43585964202892,1.15945795480671,0,1.3599426674155,0,0,0,4.0728881838208,0.340860645156116,1.29893002301434,1.06001872353102,0.845060518660083,0,0,0,0,0.253359865475099,0.505524445014783,2.74041311325744,0,0.29688427812965,1.56136794089522,0.913396434936424,0.461230994512117,1.05505848386836,0.587943535678524,0.251333182659351,0.247194967734374,0,0.884610551949874,0.485300549842228,0,0,0,2.04946557908083,4.1889341362691,0,0.359445373517761,0.599902730993408,0.508280908292259,8.23848516726525,7.77751024791665,2.63874139437015,6.60532416730651,8.95004100656157,13.714010940931,8.59878694259116,0.712875546952214,0,2.0217820674694,0.210441855886474,0.780722657776222,1.37941262660084,1.80062129805349,1.65775299619287,1.29269348387523,1.40925092313335,1.21812241927647,0.776110112217047,0.646703978798527,0.189106080167819,0.527853372491847,0.657587197282725,0,0,0.205782136407943,0.199034266818493,0,0.257347907114715,0.284163499395593,1.24275463521301,1.17263029990548,0.180062061461015,1.42046841351126,0.787056926989615,0.462801338662135,0.465067889500816,0.804820204198858,1.28441876603886,0.822799249567402,1.64167464079095,0.891756905004413,2.19299981137998,1.75640092232841,1.47627060636409,3.57492912559016,3.70456604565424,0,0,0.426576501070468,0.464473343720877,0.257734922644187,0.605050573870028,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0.342745537829186,0,0,0.193952487167626,0.280543279561274,0.189709611372772,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.947457058852424,0,0.678980343100753,0,0.502518772325447,0,0.780534591431195,0,0.44292937929755,0.637819074629948,0.327726629431476,0.518054945597687,0,0,0,0,0,12.2018448390722,10.1974167335217,0.655739781506702,0.757412781613119,0.631016438832513,1.56175497718655,1.29254038639679,0.477937595905104,0.891194696329576,0.283076530788832,1.21443210502468,0.584511715822624,0.395287777946524,4.81981974632711,0.283880170416537,0.534196811001766,0.488660878060728,0,0,0.242780636154981,0.604647113929502,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0.340439605753788,0.900305470156551,2.32845630808958,1.28602221018955,0.532020700926821,1.24858172321449,1.81003922662333,0.913394847343798,0,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0.291480836629851,7.97328798645192,0,0,0.185194527369712,0,0,0,0.509935289981566,1.25956307091292,1.10559979043539,0,0.632671987162271,0,0.648032044930808,0.836353184057875,0.436725127492355,0.134864346384821,0.330613822901344,0,0,0,148.251242873942,0.299033092087958,0,0.972255941720238,1.93739735216597,0.844780627453891,0.352071715937262,0.2604087696879,0.314578033277133,22.2257391159926,41.4763209011326,0,0,0.102710957164827,0.25984164595559,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0.386379188064381,0.187682475451182,0.549454872801795,0,0,7.90652579663893,9.66682996665071,4.58316410751517,15.4667864109319,13.0165678756422,15.8632718451837,11.4753825039407,12.6089936902782,9.9691329976525,16.5683299760582,1.24544817101012,1.59609949360412,1.19513524027894,0.972426868273176,2.30574478890781,2.20612210140017,1.77797382241292,0.618105171716683,0.962757628775446,0.758091635291392,0.50695859978048,0.754505365544305,0.936415074698824,1.21647789569252,1.26358031702349,0.476293691283074,0.347652977834566,0.77163688185482,0,1.03039244094078,0.685738504770831,1.77475806159337,0.715308569841963,1.59881058295561,1.12931256498397,1.01537529470012,0.548783918618318,1.57841826862706,0.950628796921032,1.68342681497322,0.830445126869219,2.06859412988683,1.22769312950907,0.464810523557898,0.964533054905707,3.2475375131933,0.935726433781634,1.07435527024149,1.53030665655075,0.661774257358546,0.231867835620421 | |||
|short_description=p6@Map1lc3a | |||
}} |
Latest revision as of 23:31, 25 September 2015
Short description: | p6@Map1lc3a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Map1lc3a_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -116bp_to_ENSMUST00000154596_5end |
EntrezGene: | Map1lc3a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.80e-20 | 23 |
neuroblast (sensu Vertebrata) | 4.80e-20 | 23 |
neural cell | 1.40e-17 | 43 |
ectodermal cell | 6.83e-17 | 44 |
neurectodermal cell | 6.83e-17 | 44 |
neuron | 1.36e-15 | 33 |
neuronal stem cell | 1.36e-15 | 33 |
neuroblast | 1.36e-15 | 33 |
electrically signaling cell | 1.36e-15 | 33 |
electrically responsive cell | 1.93e-12 | 39 |
electrically active cell | 1.93e-12 | 39 |
embryonic cell | 6.41e-08 | 70 |