FFCP PHASE1:Mm9::chr19:5457488..5457494,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=240514 | |EntrezGene=240514 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=347 | |MCL_coexpression_id=347 | ||
|TSSclassifier=NA | |||
|UniProt=Q6PDY0 | |UniProt=Q6PDY0 | ||
|association_with_transcript=54bp_to_ENSMUST00000053754,uc008gdd.2,uc012bgx.1_5end | |association_with_transcript=54bp_to_ENSMUST00000053754,uc008gdd.2,uc012bgx.1_5end | ||
|cluster_id=chr19:5457488..5457494,- | |||
|description=CAGE_peak_2_at_Ccdc85b_5end | |description=CAGE_peak_2_at_Ccdc85b_5end | ||
|id=chr19:5457488..5457494,- | |id=chr19:5457488..5457494,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.84e-14!73;UBERON:0005743!5.84e-14!73;UBERON:0000073!1.39e-13!75;UBERON:0001016!1.39e-13!75;UBERON:0000025!1.90e-12!114;UBERON:0004111!6.47e-12!122;UBERON:0001049!1.51e-11!52;UBERON:0005068!1.51e-11!52;UBERON:0006241!1.51e-11!52;UBERON:0007135!1.51e-11!52;UBERON:0000955!9.94e-11!50;UBERON:0006238!9.94e-11!50;UBERON:0004121!1.54e-10!102;UBERON:0000924!1.54e-10!102;UBERON:0006601!1.54e-10!102;UBERON:0002616!2.60e-10!49;UBERON:0002020!8.45e-10!34;UBERON:0000033!9.12e-10!63;UBERON:0002346!3.81e-09!71;UBERON:0003075!3.81e-09!71;UBERON:0007284!3.81e-09!71;UBERON:0002791!9.09e-08!29;UBERON:0003528!9.09e-08!29;UBERON:0001893!9.09e-08!29;UBERON:0003080!3.24e-07!40;UBERON:0002619!6.46e-07!17;UBERON:0002780!8.66e-07!39;UBERON:0001890!8.66e-07!39;UBERON:0006240!8.66e-07!39 | |ontology_enrichment_uberon=UBERON:0001017!5.84e-14!73;UBERON:0005743!5.84e-14!73;UBERON:0000073!1.39e-13!75;UBERON:0001016!1.39e-13!75;UBERON:0000025!1.90e-12!114;UBERON:0004111!6.47e-12!122;UBERON:0001049!1.51e-11!52;UBERON:0005068!1.51e-11!52;UBERON:0006241!1.51e-11!52;UBERON:0007135!1.51e-11!52;UBERON:0000955!9.94e-11!50;UBERON:0006238!9.94e-11!50;UBERON:0004121!1.54e-10!102;UBERON:0000924!1.54e-10!102;UBERON:0006601!1.54e-10!102;UBERON:0002616!2.60e-10!49;UBERON:0002020!8.45e-10!34;UBERON:0000033!9.12e-10!63;UBERON:0002346!3.81e-09!71;UBERON:0003075!3.81e-09!71;UBERON:0007284!3.81e-09!71;UBERON:0002791!9.09e-08!29;UBERON:0003528!9.09e-08!29;UBERON:0001893!9.09e-08!29;UBERON:0003080!3.24e-07!40;UBERON:0002619!6.46e-07!17;UBERON:0002780!8.66e-07!39;UBERON:0001890!8.66e-07!39;UBERON:0006240!8.66e-07!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.88e-15,73;UBERON:0001016,1.26e-14,75;UBERON:0000073,4.84e-14,54;UBERON:0000025,5.19e-14,114;UBERON:0004111,2.60e-13,122;UBERON:0001049,6.95e-13,52;UBERON:0005068,6.95e-13,52;UBERON:0006241,6.95e-13,52;UBERON:0007135,6.95e-13,52;UBERON:0004121,2.90e-10,95;UBERON:0000924,2.90e-10,95;UBERON:0006601,2.90e-10,95;UBERON:0002020,3.34e-10,34;UBERON:0000955,5.30e-10,47;UBERON:0006238,5.30e-10,47;UBERON:0002021,1.77e-09,10;UBERON:0000411,1.77e-09,10;UBERON:0001950,1.77e-09,10;UBERON:0010314,1.84e-09,92;UBERON:0002616,1.86e-09,46;UBERON:0002346,6.55e-09,64;UBERON:0003075,6.55e-09,64;UBERON:0007284,6.55e-09,64;UBERON:0003076,1.93e-08,12;UBERON:0003057,1.93e-08,12;UBERON:0010371,2.11e-08,73;UBERON:0002619,8.80e-08,17;UBERON:0003528,1.98e-07,29;UBERON:0002791,1.98e-07,29;UBERON:0001893,1.98e-07,29;UBERON:0003080,7.63e-07,40;UBERON:0000956,8.84e-07,21;UBERON:0001869,8.84e-07,21;UBERON:0000203,8.84e-07,21 | |||
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| ||
|short_description=p2@Ccdc85b | |short_description=p2@Ccdc85b | ||
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Latest revision as of 23:32, 25 September 2015
Short description: | p2@Ccdc85b |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ccdc85b_5end |
Coexpression cluster: | MCL_coexpression_mm9:347 |
Association with transcript: | 54bp_to_ENSMUST00000053754, uc008gdd.2, uc012bgx.1_5end |
EntrezGene: | Ccdc85b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.88e-15 | 73 |
nervous system | 1.26e-14 | 75 |
regional part of nervous system | 4.84e-14 | 54 |
tube | 5.19e-14 | 114 |
anatomical conduit | 2.60e-13 | 122 |
neural tube | 6.95e-13 | 52 |
neural rod | 6.95e-13 | 52 |
future spinal cord | 6.95e-13 | 52 |
neural keel | 6.95e-13 | 52 |
ectoderm-derived structure | 2.90e-10 | 95 |
ectoderm | 2.90e-10 | 95 |
presumptive ectoderm | 2.90e-10 | 95 |
gray matter | 3.34e-10 | 34 |
brain | 5.30e-10 | 47 |
future brain | 5.30e-10 | 47 |
occipital lobe | 1.77e-09 | 10 |
visual cortex | 1.77e-09 | 10 |
neocortex | 1.77e-09 | 10 |
structure with developmental contribution from neural crest | 1.84e-09 | 92 |
regional part of brain | 1.86e-09 | 46 |
neurectoderm | 6.55e-09 | 64 |
neural plate | 6.55e-09 | 64 |
presumptive neural plate | 6.55e-09 | 64 |
posterior neural tube | 1.93e-08 | 12 |
chordal neural plate | 1.93e-08 | 12 |
ecto-epithelium | 2.11e-08 | 73 |
regional part of cerebral cortex | 8.80e-08 | 17 |
brain grey matter | 1.98e-07 | 29 |
regional part of telencephalon | 1.98e-07 | 29 |
telencephalon | 1.98e-07 | 29 |
anterior neural tube | 7.63e-07 | 40 |
cerebral cortex | 8.84e-07 | 21 |
cerebral hemisphere | 8.84e-07 | 21 |
pallium | 8.84e-07 | 21 |