Personal tools

FFCP PHASE1:Mm9::chr19:5457488..5457494,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr19:5457488..5457494,-
|DHSsupport=NA
|short_description=p2@Ccdc85b
|DPIdataset=NA
|description=CAGE_peak_2_at_Ccdc85b_5end
|association_with_transcript=54bp_to_ENSMUST00000053754,uc008gdd.2,uc012bgx.1_5end
|EntrezGene=240514
|EntrezGene=240514
|HGNC=
|HGNC=
|MCL_coexpression_id=347
|TSSclassifier=NA
|UniProt=Q6PDY0
|UniProt=Q6PDY0
|association_with_transcript=54bp_to_ENSMUST00000053754,uc008gdd.2,uc012bgx.1_5end
|cluster_id=chr19:5457488..5457494,-
|description=CAGE_peak_2_at_Ccdc85b_5end
|id=chr19:5457488..5457494,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.84e-14!73;UBERON:0005743!5.84e-14!73;UBERON:0000073!1.39e-13!75;UBERON:0001016!1.39e-13!75;UBERON:0000025!1.90e-12!114;UBERON:0004111!6.47e-12!122;UBERON:0001049!1.51e-11!52;UBERON:0005068!1.51e-11!52;UBERON:0006241!1.51e-11!52;UBERON:0007135!1.51e-11!52;UBERON:0000955!9.94e-11!50;UBERON:0006238!9.94e-11!50;UBERON:0004121!1.54e-10!102;UBERON:0000924!1.54e-10!102;UBERON:0006601!1.54e-10!102;UBERON:0002616!2.60e-10!49;UBERON:0002020!8.45e-10!34;UBERON:0000033!9.12e-10!63;UBERON:0002346!3.81e-09!71;UBERON:0003075!3.81e-09!71;UBERON:0007284!3.81e-09!71;UBERON:0002791!9.09e-08!29;UBERON:0003528!9.09e-08!29;UBERON:0001893!9.09e-08!29;UBERON:0003080!3.24e-07!40;UBERON:0002619!6.46e-07!17;UBERON:0002780!8.66e-07!39;UBERON:0001890!8.66e-07!39;UBERON:0006240!8.66e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.88e-15,73;UBERON:0001016,1.26e-14,75;UBERON:0000073,4.84e-14,54;UBERON:0000025,5.19e-14,114;UBERON:0004111,2.60e-13,122;UBERON:0001049,6.95e-13,52;UBERON:0005068,6.95e-13,52;UBERON:0006241,6.95e-13,52;UBERON:0007135,6.95e-13,52;UBERON:0004121,2.90e-10,95;UBERON:0000924,2.90e-10,95;UBERON:0006601,2.90e-10,95;UBERON:0002020,3.34e-10,34;UBERON:0000955,5.30e-10,47;UBERON:0006238,5.30e-10,47;UBERON:0002021,1.77e-09,10;UBERON:0000411,1.77e-09,10;UBERON:0001950,1.77e-09,10;UBERON:0010314,1.84e-09,92;UBERON:0002616,1.86e-09,46;UBERON:0002346,6.55e-09,64;UBERON:0003075,6.55e-09,64;UBERON:0007284,6.55e-09,64;UBERON:0003076,1.93e-08,12;UBERON:0003057,1.93e-08,12;UBERON:0010371,2.11e-08,73;UBERON:0002619,8.80e-08,17;UBERON:0003528,1.98e-07,29;UBERON:0002791,1.98e-07,29;UBERON:0001893,1.98e-07,29;UBERON:0003080,7.63e-07,40;UBERON:0000956,8.84e-07,21;UBERON:0001869,8.84e-07,21;UBERON:0000203,8.84e-07,21
|phase1_expression=1.60148847104794,0.697950815278722,0,0,0,0,0,0,0.703943610758334,1.17032263160997,0.171217968225505,0.239316476986009,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,1.61582251287033,0.0992909512008853,0.261199789138935,0,0.22940928106717,0.57423196411502,0.430761996159075,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0,0,0,0,0,0,0,0,2.26614272356039,2.12891555560981,2.0190142737785,3.9119567217402,0.218025156380447,3.51497892375155,1.1665793944457,1.1198913730029,4.31257693094915,0,0,0,1.54355661621568,0.286533439938757,1.03134418455488,0.202316460859598,1.5869729378161,1.26766280701236,7.45457970552091,5.33576877666684,0.449949858640699,0.988866362566974,0.7104801149461,1.49800055259202,9.98967593836042,0.311068836925433,0.540023753326763,0.210324961351382,3.14216082844184,3.09215957332259,0.367472397644862,0.766763768145891,0.919218786610021,1.10115880999389,4.85211884723713,5.52983519722476,0.923204014111357,0.823388792421687,0.52091337055676,5.862842979029,1.68828783009504,3.20876320331301,1.76777151284201,2.27794689278565,1.3047961207771,0.530083353332288,0.453429360640713,1.73918693221007,0,0,0,0,0,0.702222100658759,4.60161870960756,5.19572009205738,4.59341446863442,2.11265129665021,2.56652954828636,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.91347103775248,0.258937883647172,1.03909497345377,0.173485326766136,0.608930956624282,0,0.904335843315735,0.352766121407114,0.376999773989026,0.247194967734374,0.722996784599558,0,0.161766849947409,0.441683036920787,0.484875253135222,0,6.44117753425404,3.14170060220183,0.510914110417183,0,0,0,3.14560342750128,6.40500843946077,0.628271760564322,7.12679712788333,6.90431734791892,4.77912502486988,6.65189178577806,1.73126918545538,0.622034853050465,0.252722758433675,0.420883711772948,0.650602214813519,0.689706313300419,0.540186389416048,0.60281927134286,0.816437989815934,1.0249097622788,0.655912071918102,0.258703370739016,0.431135985865684,0.756424320671277,0.351902248327898,0,0.278047249225598,0.348252166522167,0,0,0.702213187313235,0,0,1.24275463521301,0.234526059981096,0.900310307305074,0.710234206755631,1.37734962223183,0.925602677324269,1.16266972375204,0.804820204198858,2.56883753207773,0.822799249567402,2.13417703302824,0.972825714550269,1.75439984910399,1.09775057645525,1.34206418760372,7.78072809687271,0.514523061896422,0,0.264450566663544,1.2797295032114,0.696710015581316,0.38660238396628,0.201683524623343,0.444756087689741,0.570676878337677,0.474529061544512,0.494096864172033,0.754005626400808,0.795825888164603,0.58489226135736,0,0,0.398282546508734,1.32767530667157,0.685491075658373,0,1.22190796707189,0.193952487167626,0.841629838683823,1.26473074248515,0.738050739898011,0.156998727841375,0.246794327843601,1.48226313543574,0,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0.936113019343682,1.76805214562978,0.179397413521912,0.482443521363367,2.03228509183265,0.189491411770485,0.977789858652155,0.678980343100753,0.704070744865506,1.17254380209271,1.42826184531608,1.17080188714679,0.945810864637146,2.6575762757853,2.07291199254733,2.45794972073607,1.38147985492716,2.60368305446721,1.50791283939272,0,0.491764273019036,1.37968373152366,3.05046120976805,2.69586879162067,2.62295912602681,1.51482556322624,0.631016438832513,0.390438744296638,0.861693590931196,0.716906393857656,0.445597348164788,0.283076530788832,0,0.584511715822624,1.18586333383957,2.24924921495265,0.425820255624806,0.712262414669021,1.46598263418218,2.14461159864296,0,0,0,1.13163047853539,0.295301892880773,0.307435147943927,1.03371317267288,0.727067458955011,0,0.632073515871632,0,1.03135543248187,0.340439605753788,0.540183282093931,0.388076051348264,0.643011105094777,0.177340233642274,1.07021290561242,0.329098041204242,0.304464949114599,0.469343416127421,0.847328283455281,0.220528398054962,0.8244312647074,0.322928853391811,0.241251699712623,0.835606408021955,0.164140899745061,1.1659233465194,3.8939313422207,0,1.23832120777933,0.740778109478847,0,0.136694227721025,0.228778173206523,0.169978429993855,0.139951452323658,0.138199973804424,2.86401185404534,1.89801596148681,0.609958401380546,0.756037385752609,0.627264888043406,1.09181281873089,1.07891477107857,0.991841468704031,1.04702376793612,1.03691978633434,0,0,0.598066184175915,0.66183396182839,0,0.516639293910924,0.337912250981556,0.704143431874524,0.911430693907651,1.36317147753424,0.724752362478018,0.864090018773596,0,0.608175645870493,0.308132871494482,0,0.179026695667481,0.198681354781265,0.240390899039938,0.738447635872886,0,0.15241361331,0.100826185136841,0.194915761479505,0.288635524920988,0.116876902181569,0.453460767230423,0,0.358855426437903,0,0.579568782096571,1.31377732815827,1.09890974560359,0.428736758158132,0.501572104035363,1.6942555278512,2.30162618253588,5.15605962095457,4.29632955859219,2.05524755931193,3.7769694869485,4.05013500139084,5.85417564191487,4.53142408984205,4.14208249401456,0.31136204275253,0,0.512200817262403,0.729320151204882,0.209613162627982,0.735374033800057,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.50695859978048,1.13175804831646,0.561849044819294,0.512201219238954,0.689225627467359,0.476293691283074,0.927074607558844,0.964546102318525,1.64834360321323,0.883193520806384,0.342869252385415,0.532427418478012,0.953744759789284,0.726732083161643,0.376437521661322,0.25384382367503,0.548783918618318,1.05227884575137,0.407412341537585,0.561142271657738,0.355905054372522,0.689531376628944,0.818462086339379,1.08455788830176,1.35034627686799,0.499621155875892,0,0.644613162144895,0.956441660344217,0.441182838239031,0.463735671240843
|phase1_expression=1.60148847104794,0.697950815278722,0,0,0,0,0,0,0.703943610758334,1.17032263160997,0.171217968225505,0.239316476986009,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,1.61582251287033,0.0992909512008853,0.261199789138935,0,0.22940928106717,0.57423196411502,0.430761996159075,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0,0,0,0,0,0,0,0,2.26614272356039,2.12891555560981,2.0190142737785,3.9119567217402,0.218025156380447,3.51497892375155,1.1665793944457,1.1198913730029,4.31257693094915,0,0,0,1.54355661621568,0.286533439938757,1.03134418455488,0.202316460859598,1.5869729378161,1.26766280701236,7.45457970552091,5.33576877666684,0.449949858640699,0.988866362566974,0.7104801149461,1.49800055259202,9.98967593836042,0.311068836925433,0.540023753326763,0.210324961351382,3.14216082844184,3.09215957332259,0.367472397644862,0.766763768145891,0.919218786610021,1.10115880999389,4.85211884723713,5.52983519722476,0.923204014111357,0.823388792421687,0.52091337055676,5.862842979029,1.68828783009504,3.20876320331301,1.76777151284201,2.27794689278565,1.3047961207771,0.530083353332288,0.453429360640713,1.73918693221007,0,0,0,0,0,0.702222100658759,4.60161870960756,5.19572009205738,4.59341446863442,2.11265129665021,2.56652954828636,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.91347103775248,0.258937883647172,1.03909497345377,0.173485326766136,0.608930956624282,0,0.904335843315735,0.352766121407114,0.376999773989026,0.247194967734374,0.722996784599558,0,0.161766849947409,0.441683036920787,0.484875253135222,0,6.44117753425404,3.14170060220183,0.510914110417183,0,0,0,3.14560342750128,6.40500843946077,0.628271760564322,7.12679712788333,6.90431734791892,4.77912502486988,6.65189178577806,1.73126918545538,0.622034853050465,0.252722758433675,0.420883711772948,0.650602214813519,0.689706313300419,0.540186389416048,0.60281927134286,0.816437989815934,1.0249097622788,0.655912071918102,0.258703370739016,0.431135985865684,0.756424320671277,0.351902248327898,0,0.278047249225598,0.348252166522167,0,0,0.702213187313235,0,0,1.24275463521301,0.234526059981096,0.900310307305074,0.710234206755631,1.37734962223183,0.925602677324269,1.16266972375204,0.804820204198858,2.56883753207773,0.822799249567402,2.13417703302824,0.972825714550269,1.75439984910399,1.09775057645525,1.34206418760372,7.78072809687271,0.514523061896422,0,0.264450566663544,1.2797295032114,0.696710015581316,0.38660238396628,0.201683524623343,0.444756087689741,0.570676878337677,0.474529061544512,0.494096864172033,0.754005626400808,0.795825888164603,0.58489226135736,0,0,0.398282546508734,1.32767530667157,0.685491075658373,0,1.22190796707189,0.193952487167626,0.841629838683823,1.26473074248515,0.738050739898011,0.156998727841375,0.246794327843601,1.48226313543574,0,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0.936113019343682,1.76805214562978,0.179397413521912,0.482443521363367,2.03228509183265,0.189491411770485,0.977789858652155,0.678980343100753,0.704070744865506,1.17254380209271,1.42826184531608,1.17080188714679,0.945810864637146,2.6575762757853,2.07291199254733,2.45794972073607,1.38147985492716,2.60368305446721,1.50791283939272,0,0.491764273019036,1.37968373152366,3.05046120976805,2.69586879162067,2.62295912602681,1.51482556322624,0.631016438832513,0.390438744296638,0.861693590931196,0.716906393857656,0.445597348164788,0.283076530788832,0,0.584511715822624,1.18586333383957,2.24924921495265,0.425820255624806,0.712262414669021,1.46598263418218,2.14461159864296,0,0,0,1.13163047853539,0.295301892880773,0.307435147943927,1.03371317267288,0.727067458955011,0,0.632073515871632,0,1.03135543248187,0.340439605753788,0.540183282093931,0.388076051348264,0.643011105094777,0.177340233642274,1.07021290561242,0.329098041204242,0.304464949114599,0.469343416127421,0.847328283455281,0.220528398054962,0.8244312647074,0.322928853391811,0.241251699712623,0.835606408021955,0.164140899745061,1.1659233465194,3.8939313422207,0,1.23832120777933,0.740778109478847,0,0.136694227721025,0.228778173206523,0.169978429993855,0.139951452323658,0.138199973804424,2.86401185404534,1.89801596148681,0.609958401380546,0.756037385752609,0.627264888043406,1.09181281873089,1.07891477107857,0.991841468704031,1.04702376793612,1.03691978633434,0,0,0.598066184175915,0.66183396182839,0,0.516639293910924,0.337912250981556,0.704143431874524,0.911430693907651,1.36317147753424,0.724752362478018,0.864090018773596,0,0.608175645870493,0.308132871494482,0,0.179026695667481,0.198681354781265,0.240390899039938,0.738447635872886,0,0.15241361331,0.100826185136841,0.194915761479505,0.288635524920988,0.116876902181569,0.453460767230423,0,0.358855426437903,0,0.579568782096571,1.31377732815827,1.09890974560359,0.428736758158132,0.501572104035363,1.6942555278512,2.30162618253588,5.15605962095457,4.29632955859219,2.05524755931193,3.7769694869485,4.05013500139084,5.85417564191487,4.53142408984205,4.14208249401456,0.31136204275253,0,0.512200817262403,0.729320151204882,0.209613162627982,0.735374033800057,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.50695859978048,1.13175804831646,0.561849044819294,0.512201219238954,0.689225627467359,0.476293691283074,0.927074607558844,0.964546102318525,1.64834360321323,0.883193520806384,0.342869252385415,0.532427418478012,0.953744759789284,0.726732083161643,0.376437521661322,0.25384382367503,0.548783918618318,1.05227884575137,0.407412341537585,0.561142271657738,0.355905054372522,0.689531376628944,0.818462086339379,1.08455788830176,1.35034627686799,0.499621155875892,0,0.644613162144895,0.956441660344217,0.441182838239031,0.463735671240843
|short_description=p2@Ccdc85b
}}
}}

Latest revision as of 23:32, 25 September 2015

Short description:p2@Ccdc85b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ccdc85b_5end
Coexpression cluster:MCL_coexpression_mm9:347
Association with transcript: 54bp_to_ENSMUST00000053754, uc008gdd.2, uc012bgx.1_5end
EntrezGene:Ccdc85b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ccdc85b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.45
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E89.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.85
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.44
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D57.13
cortex, neonate N30.CNhs11107.1392-42F26.90
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B26.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E32.57
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E87.78
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H22.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.88e-1573
nervous system1.26e-1475
regional part of nervous system4.84e-1454
tube5.19e-14114
anatomical conduit2.60e-13122
neural tube6.95e-1352
neural rod6.95e-1352
future spinal cord6.95e-1352
neural keel6.95e-1352
ectoderm-derived structure2.90e-1095
ectoderm2.90e-1095
presumptive ectoderm2.90e-1095
gray matter3.34e-1034
brain5.30e-1047
future brain5.30e-1047
occipital lobe1.77e-0910
visual cortex1.77e-0910
neocortex1.77e-0910
structure with developmental contribution from neural crest1.84e-0992
regional part of brain1.86e-0946
neurectoderm6.55e-0964
neural plate6.55e-0964
presumptive neural plate6.55e-0964
posterior neural tube1.93e-0812
chordal neural plate1.93e-0812
ecto-epithelium2.11e-0873
regional part of cerebral cortex8.80e-0817
brain grey matter1.98e-0729
regional part of telencephalon1.98e-0729
telencephalon1.98e-0729
anterior neural tube7.63e-0740
cerebral cortex8.84e-0721
cerebral hemisphere8.84e-0721
pallium8.84e-0721
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:5457488..5457494,-&oldid=4220460"